RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 ZNF724A8MTY0 619 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 LINC01387J3KSC0 135 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 TRAPPC6AO75865 159 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 MT-CO3P00414 261 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 MT-ND4LP03901 98 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 ZNF44P15621 663 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 PTAFRP25105 342 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 GDF1P27539 372 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 AKR1C3P42330 323 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 CYB561P49447 251 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 FOXG1P55316 489 aaPredicted RBP10.65□□□□□ -0.7
BEST3-201ENST00000266661 POLR2GP62487 172 aaKnown RBP eCLIP10.65□□□□□ -0.7
BEST3-201ENST00000266661 ZNF616Q08AN1 781 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 MPV17LQ2QL34 196 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 CEACAM21Q3KPI0 293 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 PCSK4Q6UW60 755 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 MEX3BQ6ZN04 569 aaKnown RBP10.65□□□□□ -0.7
BEST3-201ENST00000266661 ZFP82Q8N141 532 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 TMEM252Q8N6L7 170 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 HSD17B11Q8NBQ5 300 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 OR8G5Q8NG78 346 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 GTF3AQ92664 365 aaKnown RBP10.65□□□□□ -0.7
BEST3-201ENST00000266661 SLAMF9Q96A28 289 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 C12orf57Q99622 126 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 LYRM2Q9NU23 88 aaPredicted RBP10.65□□□□□ -0.7
BEST3-201ENST00000266661 NOSIPQ9Y314 301 aaKnown RBP10.65□□□□□ -0.7
BEST3-201ENST00000266661 RFNGQ9Y644 331 aa10.65□□□□□ -0.7
BEST3-201ENST00000266661 TRBV6-6A0A0A6YYG2 114 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 IGHV3-9P01782 118 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 HOXB1P14653 301 aaPredicted RBP10.64□□□□□ -0.71
BEST3-201ENST00000266661 MMP9P14780 707 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 NKX2-1P43699 371 aaPredicted RBP10.64□□□□□ -0.71
BEST3-201ENST00000266661 MEOX2P50222 304 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 AKR1D1P51857 326 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 CLDN18P56856 261 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 GNMTQ14749 295 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 CXorf66Q5JRM2 361 aaPredicted RBP10.64□□□□□ -0.71
BEST3-201ENST00000266661 ZNF880Q6PDB4 577 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 BATF2Q8N1L9 274 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 LFNGQ8NES3 379 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 SLC35B3Q9H1N7 401 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 SMDT1Q9H4I9 107 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 PLEKHF2Q9H8W4 249 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 RPS10P5Q9NQ39 176 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 GLRX2Q9NS18 164 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 IL36RNQ9UBH0 155 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 MED19A0JLT2 244 aaPredicted RBP10.64□□□□□ -0.71
BEST3-201ENST00000266661 ZNF732B4DXR9 585 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 MRPL33O75394 65 aaKnown RBP10.64□□□□□ -0.71
BEST3-201ENST00000266661 NEURL1O76050 574 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 WNT2P09544 360 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 ATP6V0CP27449 155 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 ASCL1P50553 236 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 PAX9P55771 341 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 CCL20P78556 96 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 DCAF12Q5T6F0 453 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 C6orf15Q6UXA7 325 aaPredicted RBP10.64□□□□□ -0.71
BEST3-201ENST00000266661 TMEM182Q6ZP80 229 aaPredicted RBP10.64□□□□□ -0.71
BEST3-201ENST00000266661 GAPTQ8N292 157 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 IL22RA2Q969J5 263 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 MALSU1Q96EH3 234 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 SPIN2AQ99865 258 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 SPIN2BQ9BPZ2 258 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 ABHD14AQ9BUJ0 271 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 SCNM1Q9BWG6 230 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 ZNF703Q9H7S9 590 aaPredicted RBP10.64□□□□□ -0.71
BEST3-201ENST00000266661 RNF115Q9Y4L5 304 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 ATP23Q9Y6H3 246 aa10.64□□□□□ -0.71
BEST3-201ENST00000266661 KIAA1324LA8MWY0 1029 aaPredicted RBP10.63□□□□□ -0.71
BEST3-201ENST00000266661 UBE2CO00762 179 aa10.63□□□□□ -0.71
BEST3-201ENST00000266661 TK1P04183 234 aa10.63□□□□□ -0.71
BEST3-201ENST00000266661 SNRNP70P08621 437 aaKnown RBP10.63□□□□□ -0.71
BEST3-201ENST00000266661 ACAA1P09110 424 aaPredicted RBP10.63□□□□□ -0.71
BEST3-201ENST00000266661 HAAOP46952 286 aa10.63□□□□□ -0.71
BEST3-201ENST00000266661 RAB5BP61020 215 aa10.63□□□□□ -0.71
BEST3-201ENST00000266661 RHEBQ15382 184 aa10.63□□□□□ -0.71
BEST3-201ENST00000266661 SPINK14Q6IE38 97 aa10.63□□□□□ -0.71
BEST3-201ENST00000266661 OR2M7Q8NG81 312 aa10.63□□□□□ -0.71
BEST3-201ENST00000266661 OR5A2Q8NGI9 324 aa10.63□□□□□ -0.71
BEST3-201ENST00000266661 POM121L2Q96KW2 1035 aa10.63□□□□□ -0.71
BEST3-201ENST00000266661 PAPOLGQ9BWT3 736 aaKnown RBP10.63□□□□□ -0.71
BEST3-201ENST00000266661 EIF5A2Q9GZV4 153 aaKnown RBP10.63□□□□□ -0.71
BEST3-201ENST00000266661 WASF3Q9UPY6 502 aa10.63□□□□□ -0.71
BEST3-201ENST00000266661 UBE2J1Q9Y385 318 aaPredicted RBP10.63□□□□□ -0.71
BEST3-201ENST00000266661 A0A1W2PPE3 182 aa10.62□□□□□ -0.71
BEST3-201ENST00000266661 PCP4L1A6NKN8 68 aa10.62□□□□□ -0.71
BEST3-201ENST00000266661 UMAD1C9J7I0 102 aa10.62□□□□□ -0.71
BEST3-201ENST00000266661 ZNHIT1O43257 154 aa10.62□□□□□ -0.71
BEST3-201ENST00000266661 ADAM20O43506 726 aa10.62□□□□□ -0.71
BEST3-201ENST00000266661 EIF3GO75821 320 aaKnown RBP eCLIP10.62□□□□□ -0.71
BEST3-201ENST00000266661 HLA-HP01893 362 aa10.62□□□□□ -0.71
BEST3-201ENST00000266661 CELA3AP09093 270 aa10.62□□□□□ -0.71
BEST3-201ENST00000266661 CTXN2P0C2S0 81 aa10.62□□□□□ -0.71
BEST3-201ENST00000266661 EPHA1P21709 976 aa10.62□□□□□ -0.71
BEST3-201ENST00000266661 VDAC1P21796 283 aa10.62□□□□□ -0.71
BEST3-201ENST00000266661 GPM6AP51674 278 aa10.62□□□□□ -0.71
BEST3-201ENST00000266661 SNRPEP62304 92 aaKnown RBP10.62□□□□□ -0.71
BEST3-201ENST00000266661 ZNF266Q14584 549 aa10.62□□□□□ -0.71
BEST3-201ENST00000266661 TSC22D1Q15714 1073 aa10.62□□□□□ -0.71
BEST3-201ENST00000266661 C20orf204Q6ZNR8 217 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms