RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 A0A1W2PPC4 97 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 ALG1L2C9J202 215 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 HPNP05981 417 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 GRK6P43250 576 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 DYNLT3P51808 116 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 CNN1P51911 297 aaKnown RBP7.6□□□□□ -1.19
VAPB-201ENST00000265619 GFERP55789 205 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 PIGPP57054 158 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 ZNF92Q03936 586 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 IL24Q13007 206 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 TMEM187Q14656 261 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 FAM180AQ6UWF9 173 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 FBXW12Q6X9E4 464 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 OR5L1Q8NGL2 311 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 OR5C1Q8NGR4 320 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 PTPMT1Q8WUK0 201 aaPredicted RBP7.6□□□□□ -1.19
VAPB-201ENST00000265619 LRRC61Q9BV99 259 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 CSTL1Q9H114 145 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 RBKSQ9H477 322 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 MCTS1Q9ULC4 181 aaKnown RBP7.6□□□□□ -1.19
VAPB-201ENST00000265619 HEBP2Q9Y5Z4 205 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 PCDH15Q96QU1 1955 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 HCRTR2O43614 444 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 IFNA21P01568 189 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 CXCL12P48061 93 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 LDLRAD2Q5SZI1 272 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 SHISA6Q6ZSJ9 500 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 LHFPL4Q7Z7J7 247 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 SULF2Q8IWU5 870 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 MAFAQ8NHW3 353 aaPredicted RBP7.6□□□□□ -1.19
VAPB-201ENST00000265619 KIR3DX1Q9H7L2 352 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 TMEM106BQ9NUM4 274 aa7.6□□□□□ -1.19
VAPB-201ENST00000265619 ZNF701Q9NV72 531 aaPredicted RBP7.6□□□□□ -1.19
VAPB-201ENST00000265619 C14orf166Q9Y224 244 aaKnown RBP7.6□□□□□ -1.19
VAPB-201ENST00000265619 ZFHX2Q9C0A1 2572 aaPredicted RBP7.59□□□□□ -1.19
VAPB-201ENST00000265619 PPBPP02775 128 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 HINT1P49773 126 aaPredicted RBP7.59□□□□□ -1.19
VAPB-201ENST00000265619 RRADP55042 308 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 FMODQ06828 376 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 ZNF154Q13106 437 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 CD226Q15762 336 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 C9orf40Q8IXQ3 194 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 ADPRHL1Q8NDY3 354 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 ZC2HC1AQ96GY0 325 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 PCBD2Q9H0N5 130 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 C11orf1Q9H5F2 150 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 OR6C3Q9NZP0 311 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 TMEM14AQ9Y6G1 99 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 MED12Q93074 2177 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 IGKV1D-43A0A0B4J1Z2 117 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 SPTY2D1-AS1A0A0U1RR47 76 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 ZNF93P35789 620 aaPredicted RBP7.59□□□□□ -1.19
VAPB-201ENST00000265619 GPR157Q5UAW9 335 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 SLC18B1Q6NT16 456 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 OGFOD3Q6PK18 319 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 IGF2-ASQ6U949 168 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 ZNF709Q8N972 641 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 CADM4Q8NFZ8 388 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 MRGPRDQ8TDS7 321 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 LOXL4Q96JB6 756 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 OR6C1Q96RD1 312 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 SEPSECSQ9HD40 501 aaKnown RBP7.59□□□□□ -1.19
VAPB-201ENST00000265619 MANBALQ9NQG1 85 aa7.59□□□□□ -1.19
VAPB-201ENST00000265619 NXT1Q9UKK6 140 aaKnown RBP7.59□□□□□ -1.19
VAPB-201ENST00000265619 COA3Q9Y2R0 106 aaPredicted RBP7.59□□□□□ -1.19
VAPB-201ENST00000265619 FAM230AA0A1W2PPH8 454 aa7.59□□□□□ -1.2
VAPB-201ENST00000265619 MEGF11A6BM72 1044 aa7.59□□□□□ -1.2
VAPB-201ENST00000265619 H0YGG7 62 aa7.59□□□□□ -1.2
VAPB-201ENST00000265619 SH2D1BO14796 132 aa7.59□□□□□ -1.2
VAPB-201ENST00000265619 RENP00797 406 aa7.59□□□□□ -1.2
VAPB-201ENST00000265619 FXYD4P59646 89 aa7.59□□□□□ -1.2
VAPB-201ENST00000265619 ARF3P61204 181 aaPredicted RBP7.59□□□□□ -1.2
VAPB-201ENST00000265619 RPL23P62829 140 aaKnown RBP7.59□□□□□ -1.2
VAPB-201ENST00000265619 ROM1Q03395 351 aa7.59□□□□□ -1.2
VAPB-201ENST00000265619 RSPO4Q2I0M5 234 aaPredicted RBP7.59□□□□□ -1.2
VAPB-201ENST00000265619 GCNT2Q8N0V5 402 aa7.59□□□□□ -1.2
VAPB-201ENST00000265619 SLC22A24Q8N4F4 322 aa7.59□□□□□ -1.2
VAPB-201ENST00000265619 OR2C3Q8N628 320 aa7.59□□□□□ -1.2
VAPB-201ENST00000265619 GATAD1Q8WUU5 269 aa7.59□□□□□ -1.2
VAPB-201ENST00000265619 RPUSD4Q96CM3 377 aaKnown RBP7.59□□□□□ -1.2
VAPB-201ENST00000265619 RSG1Q9BU20 258 aa7.59□□□□□ -1.2
VAPB-201ENST00000265619 DAPP1Q9UN19 280 aa7.59□□□□□ -1.2
VAPB-201ENST00000265619 R4GMQ9 66 aa7.59□□□□□ -1.2
VAPB-201ENST00000265619 SDK2Q58EX2 2172 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 IGLV1-36A0A0B4J1U3 117 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 A0A0U1RQV5 110 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 CEBPZOSA8MTT3 80 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 HMGB3O15347 200 aaKnown RBP7.58□□□□□ -1.2
VAPB-201ENST00000265619 TSPAN2O60636 221 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 VAMP5O95183 116 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 OR6A2O95222 327 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 TTRP02766 147 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 BCL2P10415 239 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 RIPPLY3P57055 190 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 CXorf66Q5JRM2 361 aaPredicted RBP7.58□□□□□ -1.2
VAPB-201ENST00000265619 RIPPLY2Q5TAB7 128 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 Q8N976 141 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 AGBL5Q8NDL9 886 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 ORAOV1Q8WV07 137 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 DYRK2Q92630 601 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms