RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 GSKIPQ9P0R6 139 aa9.47□□□□□ -0.89
MSH3-201ENST00000265081 MED12LQ86YW9 2145 aa9.47□□□□□ -0.89
MSH3-201ENST00000265081 ARGFXA6NJG6 315 aa9.47□□□□□ -0.89
MSH3-201ENST00000265081 ZNF205O95201 554 aa9.47□□□□□ -0.89
MSH3-201ENST00000265081 BLOC1S1P78537 153 aa9.47□□□□□ -0.89
MSH3-201ENST00000265081 HMGN3Q15651 99 aa9.47□□□□□ -0.89
MSH3-201ENST00000265081 PHLDA2Q53GA4 152 aa9.47□□□□□ -0.89
MSH3-201ENST00000265081 MCEMP1Q8IX19 187 aa9.47□□□□□ -0.89
MSH3-201ENST00000265081 TK1P04183 234 aa9.47□□□□□ -0.89
MSH3-201ENST00000265081 PAX6P26367 422 aa9.47□□□□□ -0.89
MSH3-201ENST00000265081 SPIN3Q5JUX0 258 aa9.47□□□□□ -0.89
MSH3-201ENST00000265081 ZNF295-AS1Q8N0V1 137 aa9.47□□□□□ -0.89
MSH3-201ENST00000265081 DEFB127Q9H1M4 99 aa9.47□□□□□ -0.89
MSH3-201ENST00000265081 LYRM2Q9NU23 88 aaPredicted RBP9.47□□□□□ -0.89
MSH3-201ENST00000265081 UQCC1Q9NVA1 299 aa9.47□□□□□ -0.89
MSH3-201ENST00000265081 PURGQ9UJV8 347 aaKnown RBP9.47□□□□□ -0.89
MSH3-201ENST00000265081 FBXO9Q9UK97 447 aaPredicted RBP9.47□□□□□ -0.89
MSH3-201ENST00000265081 PHF1O43189 567 aaPredicted RBP9.46□□□□□ -0.89
MSH3-201ENST00000265081 PRKACAP17612 351 aa9.46□□□□□ -0.89
MSH3-201ENST00000265081 FXYD4P59646 89 aa9.46□□□□□ -0.89
MSH3-201ENST00000265081 FAM214BQ7L5A3 538 aa9.46□□□□□ -0.89
MSH3-201ENST00000265081 WDR31Q8NA23 367 aa9.46□□□□□ -0.89
MSH3-201ENST00000265081 OR8G5Q8NG78 346 aa9.46□□□□□ -0.89
MSH3-201ENST00000265081 OR5T2Q8NGG2 359 aa9.46□□□□□ -0.89
MSH3-201ENST00000265081 RTL8AQ9BWD3 113 aa9.46□□□□□ -0.89
MSH3-201ENST00000265081 OR2W1Q9Y3N9 320 aa9.46□□□□□ -0.89
MSH3-201ENST00000265081 BSNQ9UPA5 3926 aa9.46□□□□□ -0.89
MSH3-201ENST00000265081 PIGBOS1A0A0B4J2F0 54 aa9.46□□□□□ -0.89
MSH3-201ENST00000265081 ST8SIA3O43173 380 aa9.46□□□□□ -0.89
MSH3-201ENST00000265081 FBXO24O75426 580 aa9.46□□□□□ -0.89
MSH3-201ENST00000265081 CGAP01215 116 aa9.46□□□□□ -0.89
MSH3-201ENST00000265081 F2RL1P55085 397 aa9.46□□□□□ -0.89
MSH3-201ENST00000265081 ARG2P78540 354 aa9.46□□□□□ -0.89
MSH3-201ENST00000265081 TSC22D1Q15714 1073 aa9.46□□□□□ -0.89
MSH3-201ENST00000265081 MICU1Q9BPX6 476 aa9.46□□□□□ -0.89
MSH3-201ENST00000265081 ZNF705EA8MWA4 302 aaPredicted RBP9.46□□□□□ -0.9
MSH3-201ENST00000265081 PGLYRP1O75594 196 aaPredicted RBP9.46□□□□□ -0.9
MSH3-201ENST00000265081 RHBDL1O75783 438 aa9.46□□□□□ -0.9
MSH3-201ENST00000265081 CEACAM1P13688 526 aa9.46□□□□□ -0.9
MSH3-201ENST00000265081 CBR1P16152 277 aa9.46□□□□□ -0.9
MSH3-201ENST00000265081 SELEP16581 610 aa9.46□□□□□ -0.9
MSH3-201ENST00000265081 KITLGP21583 273 aa9.46□□□□□ -0.9
MSH3-201ENST00000265081 RAB5CP51148 216 aa9.46□□□□□ -0.9
MSH3-201ENST00000265081 TESK1Q15569 626 aa9.46□□□□□ -0.9
MSH3-201ENST00000265081 C11orf53Q8IXP5 236 aa9.46□□□□□ -0.9
MSH3-201ENST00000265081 PUSL1Q8N0Z8 303 aaKnown RBP9.46□□□□□ -0.9
MSH3-201ENST00000265081 SVBPQ8N300 66 aa9.46□□□□□ -0.9
MSH3-201ENST00000265081 C17orf78Q8N4C9 275 aa9.46□□□□□ -0.9
MSH3-201ENST00000265081 SCCPDHQ8NBX0 429 aa9.46□□□□□ -0.9
MSH3-201ENST00000265081 PRR7Q8TB68 274 aa9.46□□□□□ -0.9
MSH3-201ENST00000265081 CHD3Q12873 2000 aaKnown RBP9.46□□□□□ -0.9
MSH3-201ENST00000265081 CELA3BP08861 270 aa9.46□□□□□ -0.9
MSH3-201ENST00000265081 FTH1P19P0C7X4 201 aa9.46□□□□□ -0.9
MSH3-201ENST00000265081 KIR2DL2P43627 348 aaPredicted RBP9.46□□□□□ -0.9
MSH3-201ENST00000265081 PPP1CBP62140 327 aa9.46□□□□□ -0.9
MSH3-201ENST00000265081 HAGHLQ6PII5 290 aaPredicted RBP9.46□□□□□ -0.9
MSH3-201ENST00000265081 PLSCR4Q9NRQ2 329 aa9.46□□□□□ -0.9
MSH3-201ENST00000265081 TAAR3PQ9P1P4 343 aa9.46□□□□□ -0.9
MSH3-201ENST00000265081 ESPL1Q14674 2120 aa9.45□□□□□ -0.9
MSH3-201ENST00000265081 NKX2-6A6NCS4 301 aa9.45□□□□□ -0.9
MSH3-201ENST00000265081 PTBP3O95758 552 aaKnown RBP9.45□□□□□ -0.9
MSH3-201ENST00000265081 MUC1P15941 1255 aaPredicted RBP9.45□□□□□ -0.9
MSH3-201ENST00000265081 SMUG1Q53HV7 270 aa9.45□□□□□ -0.9
MSH3-201ENST00000265081 IL22RA1Q8N6P7 574 aa9.45□□□□□ -0.9
MSH3-201ENST00000265081 WNT2BQ93097 391 aa9.45□□□□□ -0.9
MSH3-201ENST00000265081 C12orf49Q9H741 205 aa9.45□□□□□ -0.9
MSH3-201ENST00000265081 SLC34A2O95436 690 aa9.45□□□□□ -0.9
MSH3-201ENST00000265081 WT1P19544 449 aaPredicted RBP9.45□□□□□ -0.9
MSH3-201ENST00000265081 VDAC1P21796 283 aa9.45□□□□□ -0.9
MSH3-201ENST00000265081 CCNOP22674 350 aa9.45□□□□□ -0.9
MSH3-201ENST00000265081 NOVA1P51513 510 aaKnown RBP9.45□□□□□ -0.9
MSH3-201ENST00000265081 C5orf24Q7Z6I8 188 aa9.45□□□□□ -0.9
MSH3-201ENST00000265081 C1orf174Q8IYL3 243 aa9.45□□□□□ -0.9
MSH3-201ENST00000265081 HIST1H2AAQ96QV6 131 aa9.45□□□□□ -0.9
MSH3-201ENST00000265081 LSM5Q9Y4Y9 91 aaKnown RBP9.45□□□□□ -0.9
MSH3-201ENST00000265081 WISP2O76076 250 aa9.45□□□□□ -0.9
MSH3-201ENST00000265081 EWSR1Q01844 656 aaKnown RBP eCLIP9.45□□□□□ -0.9
MSH3-201ENST00000265081 C3orf36Q3SXR2 165 aa9.45□□□□□ -0.9
MSH3-201ENST00000265081 IGFL3Q6UXB1 125 aa9.45□□□□□ -0.9
MSH3-201ENST00000265081 LSM10Q969L4 123 aaKnown RBP9.45□□□□□ -0.9
MSH3-201ENST00000265081 AKR1E2Q96JD6 320 aa9.45□□□□□ -0.9
MSH3-201ENST00000265081 POLDIP2Q9Y2S7 368 aa9.45□□□□□ -0.9
MSH3-201ENST00000265081 ZNF891A8MT65 544 aaPredicted RBP9.44□□□□□ -0.9
MSH3-201ENST00000265081 K7N7A8 449 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 ZNHIT1O43257 154 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 APOC3P02656 99 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 CTRB1P17538 263 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 CA6P23280 308 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 SNCAP37840 140 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 PAX9P55771 341 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 BAXQ07812 192 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 MBNL2Q5VZF2 373 aaKnown RBP9.44□□□□□ -0.9
MSH3-201ENST00000265081 CTRB2Q6GPI1 263 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 OR2T2Q6IF00 324 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 FDCSPQ8NFU4 85 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 ZNF488Q96MN9 340 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 SPIN2AQ99865 258 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 SPIN2BQ9BPZ2 258 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 STRAPQ9Y3F4 350 aaKnown RBP9.44□□□□□ -0.9
MSH3-201ENST00000265081 A0A1W2PR80 420 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms