RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 GLAP06280 429 aa8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 INPP1P49441 399 aa8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 MRPS10P82664 201 aaKnown RBP8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 KLF9Q13886 244 aaPredicted RBP8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 ARL6IP1Q15041 203 aa8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 ZNF841Q6ZN19 808 aa8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 SLC36A1Q7Z2H8 476 aa8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 TOMM5Q8N4H5 51 aa8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 BEST4Q8NFU0 473 aa8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 MED30Q96HR3 178 aa8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 GSX2Q9BZM3 304 aa8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 TINAGL1Q9GZM7 467 aaPredicted RBP8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 Q9N2K0 584 aa8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 C12orf4Q9NQ89 552 aa8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 SLC25A10Q9UBX3 287 aaPredicted RBP8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 CSMD1Q96PZ7 3565 aa8.08□□□□□ -1.12
SNRNP40-201ENST00000263694 ASH1LQ9NR48 2969 aaKnown RBP8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 IGHV4-30-2A0A087WSY4 118 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 H3BUI4 141 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 SDCBPO00560 298 aaPredicted RBP8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 MGST3O14880 152 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 WNT2P09544 360 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 SCTP09683 121 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 GSTT2P0CG29 244 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 GSTT2BP0CG30 244 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 RPS2P15880 293 aaKnown RBP8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 DNASE1P24855 282 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 GIFP27352 417 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 RFX2P48378 723 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 SMCPP49901 116 aaPredicted RBP8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 DEFB113Q30KQ7 82 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 SHEQ5VZ18 495 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 SLC35E4Q6ICL7 350 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 GDPD3Q7L5L3 318 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 HOGA1Q86XE5 327 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 GAPTQ8N292 157 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 MUC20Q8N307 709 aaPredicted RBP8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 PRR18Q8N4B5 295 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 OR13A1Q8NGR1 328 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 MRGPRDQ8TDS7 321 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 H1FXQ92522 213 aaKnown RBP8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 FAM168AQ92567 244 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 C11orf54Q9H0W9 315 aaPredicted RBP8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 DNTTIP1Q9H147 329 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 TRAPPC2LQ9UL33 140 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 ANAPC10Q9UM13 185 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 PCDHB10Q9UN67 800 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 PDZD2O15018 2839 aa8.07□□□□□ -1.12
SNRNP40-201ENST00000263694 TMEM30CPA0ZSE6 113 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 ODAMA1E959 279 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 ZNF736B4DX44 427 aaPredicted RBP8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 PHF1O43189 567 aaPredicted RBP8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 NDUFB3O43676 98 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 NDUFA2O43678 99 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 PAX1P15863 534 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 NAT1P18440 290 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 RCVRNP35243 200 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 HRH1P35367 487 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 CBX5P45973 191 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 ERVFRD-1P60508 538 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 KCNJ8Q15842 424 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 TMEM155Q4W5P6 130 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 LRRC10Q5BKY1 277 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 IGSF11Q5DX21 431 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 FAM53AQ6NSI3 398 aaPredicted RBP8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 ZNF880Q6PDB4 577 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 GLCCI1Q86VQ1 547 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 POC5Q8NA72 575 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 TMEM229BQ8NBD8 167 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 OR5D13Q8NGL4 314 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 OR4C16Q8NGL9 310 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 OR56B4Q8NH76 319 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 RFESDQ8TAC1 157 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 PPP1R35Q8TAP8 253 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 C10orf105Q8TEF2 133 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 LURAP1Q96LR2 239 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 PATZ1Q9HBE1 687 aaKnown RBP8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 BARX1Q9HBU1 254 aaPredicted RBP8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 HRASLSQ9HDD0 168 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 C19orf12Q9NSK7 152 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 KAAG1Q9UBP8 84 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 PRRC2AP48634 2157 aaKnown RBP8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 ABCA2Q9BZC7 2435 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 CCDC168Q8NDH2 2452 aa8.06□□□□□ -1.12
SNRNP40-201ENST00000263694 TRBV6-6A0A0A6YYG2 114 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 IGKV1-6A0A0C4DH72 117 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 FSTL3O95633 263 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 CSF1P09603 554 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 SPNP16150 400 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 DTYMKP23919 212 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 IL2RGP31785 369 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 GLP1RP43220 463 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 KCNJ3P48549 501 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 P2RX3P56373 397 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 ACTBP60709 375 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 ACTG1P63261 375 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 STEAP1BQ6NZ63 245 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 CLEC2AQ6UVW9 174 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 TCF23Q7RTU1 214 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 OR1L1Q8NH94 360 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms