RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 RRAS2P62070 204 aaPredicted RBP19.14■□□□□ 0.65
SMARCB1-201ENST00000263121 CBX3Q13185 183 aa19.14■□□□□ 0.65
SMARCB1-201ENST00000263121 IGSF11Q5DX21 431 aa19.14■□□□□ 0.65
SMARCB1-201ENST00000263121 MEX3BQ6ZN04 569 aaKnown RBP19.14■□□□□ 0.65
SMARCB1-201ENST00000263121 C5orf24Q7Z6I8 188 aa19.14■□□□□ 0.65
SMARCB1-201ENST00000263121 C1orf87Q8N0U7 546 aa19.14■□□□□ 0.65
SMARCB1-201ENST00000263121 CCDC107Q8WV48 283 aa19.14■□□□□ 0.65
SMARCB1-201ENST00000263121 SDSLQ96GA7 329 aa19.14■□□□□ 0.65
SMARCB1-201ENST00000263121 SNX22Q96L94 193 aa19.14■□□□□ 0.65
SMARCB1-201ENST00000263121 SEC22CQ9BRL7 303 aa19.14■□□□□ 0.65
SMARCB1-201ENST00000263121 MGAT4AQ9UM21 535 aa19.14■□□□□ 0.65
SMARCB1-201ENST00000263121 GPR132Q9UNW8 380 aa19.14■□□□□ 0.65
SMARCB1-201ENST00000263121 PKDREJQ9NTG1 2253 aa19.13■□□□□ 0.65
SMARCB1-201ENST00000263121 A6NNC1 897 aa19.13■□□□□ 0.65
SMARCB1-201ENST00000263121 ZNF205O95201 554 aa19.13■□□□□ 0.65
SMARCB1-201ENST00000263121 HERPUD1Q15011 391 aa19.13■□□□□ 0.65
SMARCB1-201ENST00000263121 TMED4Q7Z7H5 227 aa19.13■□□□□ 0.65
SMARCB1-201ENST00000263121 AKAP14Q86UN6 197 aa19.13■□□□□ 0.65
SMARCB1-201ENST00000263121 DTX2Q86UW9 622 aa19.13■□□□□ 0.65
SMARCB1-201ENST00000263121 TRAPPC2LQ9UL33 140 aa19.13■□□□□ 0.65
SMARCB1-201ENST00000263121 MAB21L2Q9Y586 359 aa19.13■□□□□ 0.65
SMARCB1-201ENST00000263121 KLF2Q9Y5W3 355 aaPredicted RBP19.13■□□□□ 0.65
SMARCB1-201ENST00000263121 IGKV1-6A0A0C4DH72 117 aa19.12■□□□□ 0.65
SMARCB1-201ENST00000263121 LGALS8O00214 317 aa19.12■□□□□ 0.65
SMARCB1-201ENST00000263121 SOD3P08294 240 aa19.12■□□□□ 0.65
SMARCB1-201ENST00000263121 AESQ08117 197 aa19.12■□□□□ 0.65
SMARCB1-201ENST00000263121 CD300CQ08708 224 aa19.12■□□□□ 0.65
SMARCB1-201ENST00000263121 SURF2Q15527 256 aaPredicted RBP19.12■□□□□ 0.65
SMARCB1-201ENST00000263121 ZNF554Q86TJ5 538 aa19.12■□□□□ 0.65
SMARCB1-201ENST00000263121 OR4A4PQ8NGN8 299 aa19.12■□□□□ 0.65
SMARCB1-201ENST00000263121 PPP1R35Q8TAP8 253 aa19.12■□□□□ 0.65
SMARCB1-201ENST00000263121 CCL17Q92583 94 aa19.12■□□□□ 0.65
SMARCB1-201ENST00000263121 VRK1Q99986 396 aaPredicted RBP19.12■□□□□ 0.65
SMARCB1-201ENST00000263121 GPN1Q9HCN4 374 aaPredicted RBP19.12■□□□□ 0.65
SMARCB1-201ENST00000263121 KIF25Q9UIL4 384 aa19.12■□□□□ 0.65
SMARCB1-201ENST00000263121 TRAV39A0A0B4J263 110 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 IGHV1-69-2A0A0G2JMI3 117 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 SNRPGP15A8MWD9 76 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 K7N7A8 449 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 CTXN2P0C2S0 81 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 ECI1P42126 302 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 GLP1RP43220 463 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 ZNF626Q68DY1 528 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 SLC25A42Q86VD7 318 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 ZNF561Q8N587 486 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 DEFB108BQ8NET1 73 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 CAPSLQ8WWF8 208 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 DACT3Q96B18 629 aaPredicted RBP19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 SCGB3A2Q96PL1 93 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 CABLES2Q9BTV7 478 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 GOSR1O95249 250 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 FCGR2CP31995 323 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 HMGN3Q15651 99 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 KRBOX4Q5JUW0 171 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 ZNF788Q6ZQV5 615 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 ZNRF1Q8ND25 227 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 GAFA1Q96PS6 74 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 TMPRSS13Q9BYE2 586 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 C5orf66Q9H5L9 145 aa19.11■□□□□ 0.65
SMARCB1-201ENST00000263121 RAI1Q7Z5J4 1906 aaPredicted RBP19.1■□□□□ 0.65
SMARCB1-201ENST00000263121 PPIAL4EA0A075B759 164 aa19.1■□□□□ 0.65
SMARCB1-201ENST00000263121 TRAV38-1A0A0B4J264 116 aa19.1■□□□□ 0.65
SMARCB1-201ENST00000263121 PPIAL4DF5H284 164 aa19.1■□□□□ 0.65
SMARCB1-201ENST00000263121 MGST3O14880 152 aa19.1■□□□□ 0.65
SMARCB1-201ENST00000263121 OR4E1P0C645 316 aa19.1■□□□□ 0.65
SMARCB1-201ENST00000263121 PPIAL4FP0DN26 164 aa19.1■□□□□ 0.65
SMARCB1-201ENST00000263121 SEC61A1P61619 476 aaKnown RBP19.1■□□□□ 0.65
SMARCB1-201ENST00000263121 CD276Q5ZPR3 534 aa19.1■□□□□ 0.65
SMARCB1-201ENST00000263121 OR52B4Q8NGK2 314 aa19.1■□□□□ 0.65
SMARCB1-201ENST00000263121 TRAF4Q9BUZ4 470 aaPredicted RBP19.1■□□□□ 0.65
SMARCB1-201ENST00000263121 FXYD6Q9H0Q3 95 aa19.1■□□□□ 0.65
SMARCB1-201ENST00000263121 MED28Q9H204 178 aa19.1■□□□□ 0.65
SMARCB1-201ENST00000263121 PCDHB10Q9UN67 800 aa19.1■□□□□ 0.65
SMARCB1-201ENST00000263121 PPIAL4AQ9Y536 164 aa19.1■□□□□ 0.65
SMARCB1-201ENST00000263121 DSCAMO60469 2012 aa19.09■□□□□ 0.65
SMARCB1-201ENST00000263121 ZNF462Q96JM2 2506 aa19.09■□□□□ 0.65
SMARCB1-201ENST00000263121 CREBL2O60519 120 aaPredicted RBP19.09■□□□□ 0.65
SMARCB1-201ENST00000263121 CCNKO75909 580 aa19.09■□□□□ 0.65
SMARCB1-201ENST00000263121 GYPAP02724 150 aa19.09■□□□□ 0.65
SMARCB1-201ENST00000263121 TK1P04183 234 aa19.09■□□□□ 0.65
SMARCB1-201ENST00000263121 GLIPR1P48060 266 aa19.09■□□□□ 0.65
SMARCB1-201ENST00000263121 SRSF1Q07955 248 aaKnown RBP eCLIP19.09■□□□□ 0.65
SMARCB1-201ENST00000263121 FAHD2BQ6P2I3 314 aaPredicted RBP19.09■□□□□ 0.65
SMARCB1-201ENST00000263121 ADAD2Q8NCV1 583 aaKnown RBP19.09■□□□□ 0.65
SMARCB1-201ENST00000263121 MOB3AQ96BX8 217 aa19.09■□□□□ 0.65
SMARCB1-201ENST00000263121 FAHD2AQ96GK7 314 aa19.09■□□□□ 0.65
SMARCB1-201ENST00000263121 RTBDNQ9BSG5 229 aaPredicted RBP19.09■□□□□ 0.65
SMARCB1-201ENST00000263121 ZNF665Q9H7R5 613 aa19.09■□□□□ 0.65
SMARCB1-201ENST00000263121 MEIKINA0A087WXM9 373 aa19.08■□□□□ 0.65
SMARCB1-201ENST00000263121 BET1O15155 118 aa19.08■□□□□ 0.65
SMARCB1-201ENST00000263121 NFYAP23511 347 aaPredicted RBP19.08■□□□□ 0.65
SMARCB1-201ENST00000263121 BAMBIQ13145 260 aa19.08■□□□□ 0.65
SMARCB1-201ENST00000263121 FCN2Q15485 313 aa19.08■□□□□ 0.65
SMARCB1-201ENST00000263121 C4orf46Q504U0 113 aa19.08■□□□□ 0.65
SMARCB1-201ENST00000263121 TMEM185AQ8NFB2 350 aa19.08■□□□□ 0.65
SMARCB1-201ENST00000263121 CCL13Q99616 98 aa19.08■□□□□ 0.65
SMARCB1-201ENST00000263121 RAB1BQ9H0U4 201 aa19.08■□□□□ 0.65
SMARCB1-201ENST00000263121 TAF9BQ9HBM6 251 aa19.08■□□□□ 0.65
SMARCB1-201ENST00000263121 ZNF69Q9UC07 566 aa19.08■□□□□ 0.65
SMARCB1-201ENST00000263121 KMT2BQ9UMN6 2715 aaPredicted RBP19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms