RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 TMPRSS11AQ6ZMR5 421 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 RNF144BQ7Z419 303 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 SLC35E3Q7Z769 313 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 ZNF329Q86UD4 541 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 THNSL2Q86YJ6 484 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 OR8H3Q8N146 312 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 PARP16Q8N5Y8 322 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 PXT1Q8NFP0 134 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 OR51T1Q8NGJ9 327 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 OR13A1Q8NGR1 328 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 GPR148Q8TDV2 347 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 WIPF2Q8TF74 440 aaPredicted RBP9.75□□□□□ -0.85
TRAF4-202ENST00000262396 ERVK13-1Q9NX77 482 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 TAS2R4Q9NYW5 299 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 CKLFQ9UBR5 152 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 PSG11Q9UQ72 335 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 ST3GAL6Q9Y274 331 aa9.75□□□□□ -0.85
TRAF4-202ENST00000262396 A0A087X0M5 115 aa9.74□□□□□ -0.85
TRAF4-202ENST00000262396 A0A1B0GX30 115 aa9.74□□□□□ -0.85
TRAF4-202ENST00000262396 TMEM30CPA0ZSE6 113 aa9.74□□□□□ -0.85
TRAF4-202ENST00000262396 J3QRE1 110 aa9.74□□□□□ -0.85
TRAF4-202ENST00000262396 CCRL2O00421 344 aa9.74□□□□□ -0.85
TRAF4-202ENST00000262396 IGKV1D-33P01593 117 aa9.74□□□□□ -0.85
TRAF4-202ENST00000262396 IGKV1-33P01594 117 aa9.74□□□□□ -0.85
TRAF4-202ENST00000262396 GAPDHP04406 335 aaKnown RBP9.74□□□□□ -0.85
TRAF4-202ENST00000262396 GZMHP20718 246 aa9.74□□□□□ -0.85
TRAF4-202ENST00000262396 HOXD3P31249 432 aaPredicted RBP9.74□□□□□ -0.85
TRAF4-202ENST00000262396 ZP1P60852 638 aa9.74□□□□□ -0.85
TRAF4-202ENST00000262396 DCTN2Q13561 401 aaKnown RBP9.74□□□□□ -0.85
TRAF4-202ENST00000262396 CDK5R1Q15078 307 aa9.74□□□□□ -0.85
TRAF4-202ENST00000262396 PIGYQ3MUY2 71 aa9.74□□□□□ -0.85
TRAF4-202ENST00000262396 VAX1Q5SQQ9 334 aa9.74□□□□□ -0.85
TRAF4-202ENST00000262396 DDI2Q5TDH0 399 aa9.74□□□□□ -0.85
TRAF4-202ENST00000262396 C10orf99Q6UWK7 81 aa9.74□□□□□ -0.85
TRAF4-202ENST00000262396 KLHL30-AS1Q8NEE0 82 aa9.74□□□□□ -0.85
TRAF4-202ENST00000262396 DPCDQ9BVM2 203 aaPredicted RBP9.74□□□□□ -0.85
TRAF4-202ENST00000262396 RAB9BQ9NP90 201 aa9.74□□□□□ -0.85
TRAF4-202ENST00000262396 LINC00527Q9UJ94 153 aa9.74□□□□□ -0.85
TRAF4-202ENST00000262396 TRAV39A0A0B4J263 110 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 TRAV24A0A0B4J272 114 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 LOC100130705A0A1B0GUX0 176 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 A0A1W2PPE3 182 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 SDCBPO00560 298 aaPredicted RBP9.73□□□□□ -0.85
TRAF4-202ENST00000262396 GABRPO00591 440 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 HSD17B6O14756 317 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 CDRT1O95170 752 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 MYL12AP19105 171 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 SERPINA2P20848 420 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 SSTR5P35346 364 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 ZNF93P35789 620 aaPredicted RBP9.73□□□□□ -0.85
TRAF4-202ENST00000262396 REG1BP48304 166 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 TCTEX1D4Q5JR98 221 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 ELP2Q6IA86 826 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 RPL22L1Q6P5R6 122 aaKnown RBP9.73□□□□□ -0.85
TRAF4-202ENST00000262396 SLC16A12Q6ZSM3 486 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 SUMF2Q8NBJ7 301 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 OR10A7Q8NGE5 316 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 OR52I1Q8NGK6 324 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 OR52N1Q8NH53 320 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 CCDC107Q8WV48 283 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 ARL11Q969Q4 196 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 RNF166Q96A37 237 aaPredicted RBP9.73□□□□□ -0.85
TRAF4-202ENST00000262396 NOL4LQ96MY1 436 aaPredicted RBP9.73□□□□□ -0.85
TRAF4-202ENST00000262396 RASL11BQ9BPW5 248 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 JAM3Q9BX67 310 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 GON7Q9BXV9 100 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 TMEM138Q9NPI0 162 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 ZFP57Q9NU63 452 aa9.73□□□□□ -0.85
TRAF4-202ENST00000262396 IGHV3-72A0A0B4J1Y9 119 aa9.72□□□□□ -0.85
TRAF4-202ENST00000262396 IRGMA1A4Y4 181 aa9.72□□□□□ -0.85
TRAF4-202ENST00000262396 E9PI62 339 aa9.72□□□□□ -0.85
TRAF4-202ENST00000262396 LY6LH3BQJ8 138 aa9.72□□□□□ -0.85
TRAF4-202ENST00000262396 FGF16O43320 207 aa9.72□□□□□ -0.85
TRAF4-202ENST00000262396 RRP9O43818 475 aaKnown RBP9.72□□□□□ -0.85
TRAF4-202ENST00000262396 ZNF780AO75290 641 aaPredicted RBP9.72□□□□□ -0.85
TRAF4-202ENST00000262396 BAG2O95816 211 aa9.72□□□□□ -0.85
TRAF4-202ENST00000262396 BDKRB2P30411 391 aa9.72□□□□□ -0.85
TRAF4-202ENST00000262396 GTF2A1P52655 376 aaPredicted RBP9.72□□□□□ -0.85
TRAF4-202ENST00000262396 RPL23AP62750 156 aaKnown RBP9.72□□□□□ -0.85
TRAF4-202ENST00000262396 RSBN1Q5VWQ0 802 aaPredicted RBP9.72□□□□□ -0.85
TRAF4-202ENST00000262396 C8orf86Q6ZUL3 223 aa9.72□□□□□ -0.85
TRAF4-202ENST00000262396 COMMD1Q8N668 190 aa9.72□□□□□ -0.85
TRAF4-202ENST00000262396 C5orf56Q8N8D9 126 aa9.72□□□□□ -0.85
TRAF4-202ENST00000262396 OR51A2Q8NGJ7 313 aa9.72□□□□□ -0.85
TRAF4-202ENST00000262396 OR2T10Q8NGZ9 312 aa9.72□□□□□ -0.85
TRAF4-202ENST00000262396 RHOXF1Q8NHV9 184 aa9.72□□□□□ -0.85
TRAF4-202ENST00000262396 PLPPR1Q8TBJ4 325 aa9.72□□□□□ -0.85
TRAF4-202ENST00000262396 TMEM106AQ96A25 262 aa9.72□□□□□ -0.85
TRAF4-202ENST00000262396 NCOR1P1Q9H4R4 102 aa9.72□□□□□ -0.85
TRAF4-202ENST00000262396 TRAPPC2LQ9UL33 140 aa9.72□□□□□ -0.85
TRAF4-202ENST00000262396 MCRIP1C9JLW8 97 aa9.71□□□□□ -0.86
TRAF4-202ENST00000262396 K7EIL1 84 aa9.71□□□□□ -0.86
TRAF4-202ENST00000262396 AIPO00170 330 aa9.71□□□□□ -0.86
TRAF4-202ENST00000262396 AP4M1O00189 453 aa9.71□□□□□ -0.86
TRAF4-202ENST00000262396 SPINT2O43291 252 aa9.71□□□□□ -0.86
TRAF4-202ENST00000262396 AMY1AP04745 511 aa9.71□□□□□ -0.86
TRAF4-202ENST00000262396 AMY2AP04746 511 aa9.71□□□□□ -0.86
TRAF4-202ENST00000262396 GTF2F2P13984 249 aa9.71□□□□□ -0.86
TRAF4-202ENST00000262396 SLC6A1P30531 599 aa9.71□□□□□ -0.86
TRAF4-202ENST00000262396 MYCNOSP40205 109 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms