RNA–Protein interactions for RNA: ENST00000262053.7

ATF1-201, Transcript of activating transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-201ENST00000262053 NELFCDQ8IXH7 590 aa1.34□□□□□ -2.2
ATF1-201ENST00000262053 ENTHD1Q8IYW4 607 aa1.34□□□□□ -2.2
ATF1-201ENST00000262053 ZCCHC24Q8N2G6 241 aaKnown RBP1.34□□□□□ -2.2
ATF1-201ENST00000262053 SPICQ8N5J4 248 aa1.34□□□□□ -2.2
ATF1-201ENST00000262053 LINC01560Q8TB33 94 aa1.34□□□□□ -2.2
ATF1-201ENST00000262053 GHSRQ92847 366 aa1.34□□□□□ -2.2
ATF1-201ENST00000262053 HGDQ93099 445 aa1.34□□□□□ -2.2
ATF1-201ENST00000262053 ADTRPQ96IZ2 230 aa1.34□□□□□ -2.2
ATF1-201ENST00000262053 RILPQ96NA2 401 aa1.34□□□□□ -2.2
ATF1-201ENST00000262053 COPS4Q9BT78 406 aa1.34□□□□□ -2.2
ATF1-201ENST00000262053 SHCBP1LQ9BZQ2 653 aa1.34□□□□□ -2.2
ATF1-201ENST00000262053 SLC38A10Q9HBR0 1119 aa1.34□□□□□ -2.2
ATF1-201ENST00000262053 C12orf4Q9NQ89 552 aa1.34□□□□□ -2.2
ATF1-201ENST00000262053 DDIT4Q9NX09 232 aa1.34□□□□□ -2.2
ATF1-201ENST00000262053 CD300AQ9UGN4 299 aa1.34□□□□□ -2.2
ATF1-201ENST00000262053 RFNGQ9Y644 331 aa1.34□□□□□ -2.2
ATF1-201ENST00000262053 DSPP15924 2871 aaKnown RBP1.34□□□□□ -2.2
ATF1-201ENST00000262053 COL4A2P08572 1712 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 HIVEP1P15822 2718 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 RAD50Q92878 1312 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 A0A1B0GTI1 187 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 ERICH2A1L162 156 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 M0R1X1 148 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 TCAPO15273 167 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 RBFOX2O43251 390 aaKnown RBP eCLIP1.33□□□□□ -2.2
ATF1-201ENST00000262053 MED6O75586 246 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 VAMP5O95183 116 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 BRI3O95415 125 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 CCNE2O96020 404 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 ME2P23368 584 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 RANBP1P43487 201 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 DEFA6Q01524 100 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 SLAMF1Q13291 335 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 CEACAM16Q2WEN9 425 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 ZNF684Q5T5D7 378 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 AP1ARQ63HQ0 302 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 SAXO2Q658L1 398 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 ZNF470Q6ECI4 717 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 THOC7Q6I9Y2 204 aaKnown RBP1.33□□□□□ -2.2
ATF1-201ENST00000262053 Q6ZT83 130 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 COMTD1Q86VU5 262 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 RNF10Q8N5U6 811 aaKnown RBP1.33□□□□□ -2.2
ATF1-201ENST00000262053 TTLQ8NG68 377 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 UBA3Q8TBC4 463 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 CIRBP-AS1Q8TBR5 109 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 ING5Q8WYH8 240 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 SLC25A46Q96AG3 418 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 S100PBPQ96BU1 408 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 ALS2CR12Q96Q35 445 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 TMED9Q9BVK6 235 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 CHMP4BQ9H444 224 aaKnown RBP1.33□□□□□ -2.2
ATF1-201ENST00000262053 OPN4Q9UHM6 478 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 PPIL1Q9Y3C6 166 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 LRRC42Q9Y546 428 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 USP9YO00507 2555 aaPredicted RBP1.33□□□□□ -2.2
ATF1-201ENST00000262053 CABIN1Q9Y6J0 2220 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 ANKHD1Q8IWZ3 2542 aaKnown RBP1.33□□□□□ -2.2
ATF1-201ENST00000262053 NUP214P35658 2090 aaPredicted RBP1.33□□□□□ -2.2
ATF1-201ENST00000262053 ANKRD12Q6UB98 2062 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 DOCK8Q8NF50 2099 aa1.33□□□□□ -2.2
ATF1-201ENST00000262053 CENPVL3A0A0U1RRI6 287 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 C5orf63A6NC05 138 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 CDIPTO14735 213 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 PLIN3O60664 434 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 LDOC1O95751 146 aaPredicted RBP1.32□□□□□ -2.2
ATF1-201ENST00000262053 IGKV1D-16P01601 117 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 IGLV3-25P01717 112 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 LINC00869P0C866 280 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 SLC35E2BP0CK96 405 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 IL3RAP26951 378 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 OR4D1Q15615 310 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 C5orf47Q569G3 176 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 YIF1BQ5BJH7 314 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 PDPK2PQ6A1A2 396 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 FAM71E1Q6IPT2 247 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 Q6ZSR6 202 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 MRPL52Q86TS9 123 aaKnown RBP1.32□□□□□ -2.2
ATF1-201ENST00000262053 NT5DC3Q86UY8 548 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 TMEM256Q8N2U0 113 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 LRRC52Q8N7C0 313 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 SLC25A29Q8N8R3 303 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 SPANXA2-OT1Q8N9U9 137 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 OR2M7Q8NG81 312 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 OR10C1Q96KK4 312 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 Q96MT0 163 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 ZNF75AQ96N20 296 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 ZNF396Q96N95 335 aaPredicted RBP1.32□□□□□ -2.2
ATF1-201ENST00000262053 ZFP3Q96NJ6 502 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 TRNT1Q96Q11 434 aaKnown RBP1.32□□□□□ -2.2
ATF1-201ENST00000262053 SPACA5Q96QH8 159 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 HBEGFQ99075 208 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 VAT1Q99536 393 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 RNF5Q99942 180 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 VCXQ9H320 206 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 NRBP2Q9NSY0 501 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 TMEM100Q9NV29 134 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 NLE1Q9NVX2 485 aaPredicted RBP1.32□□□□□ -2.2
ATF1-201ENST00000262053 PRO0461Q9UI25 63 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 ANXA10Q9UJ72 324 aa1.32□□□□□ -2.2
ATF1-201ENST00000262053 ZNF223Q9UK11 482 aaPredicted RBP1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms