RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 PTX4Q96A99 478 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 PCGF1Q9BSM1 259 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 PRSS50Q9UI38 385 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 RALYQ9UKM9 306 aaKnown RBP12.59□□□□□ -0.39
CUX2-201ENST00000261726 SYNGR2O43760 224 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 SMPD2O60906 423 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 DEDDO75618 318 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 IER3P46695 156 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 HYAL1Q12794 435 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 SPICQ8N5J4 248 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 ASB10Q8WXI3 467 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 IGHV1OR21-1A0A087WYE8 117 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 HIST1H1EP10412 219 aaKnown RBP12.59□□□□□ -0.39
CUX2-201ENST00000261726 SRD5A2P31213 254 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 REG1BP48304 166 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 ROM1Q03395 351 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 SRSF5Q13243 272 aaKnown RBP12.59□□□□□ -0.39
CUX2-201ENST00000261726 NKG7Q16617 165 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 AWAT1Q58HT5 328 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 C19orf54Q5BKX5 351 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 PWWP2BQ6NUJ5 590 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 GAPTQ8N292 157 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 OR1K1Q8NGR3 316 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 TP53RKQ96S44 253 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 ATG101Q9BSB4 218 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 NAT1P18440 290 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 DLK1P80370 383 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 KCNMB1Q16558 191 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 C17orf47Q8NEP4 570 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 DPH3P1Q9H4G8 78 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 C1RLQ9NZP8 487 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 TINAGQ9UJW2 476 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 CES1P1Q9UKY3 287 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 EXOGQ9Y2C4 368 aaKnown RBP12.59□□□□□ -0.39
CUX2-201ENST00000261726 HOXB3P14651 431 aaPredicted RBP12.59□□□□□ -0.39
CUX2-201ENST00000261726 ID1P41134 155 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 WDR74Q6RFH5 385 aaPredicted RBP12.59□□□□□ -0.39
CUX2-201ENST00000261726 BPIFA4PQ86YQ2 179 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 FAM219AQ8IW50 185 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 RAB37Q96AX2 223 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 SOSTQ9BQB4 213 aa12.59□□□□□ -0.39
CUX2-201ENST00000261726 TMEFF2Q9UIK5 374 aaPredicted RBP12.59□□□□□ -0.39
CUX2-201ENST00000261726 A6NDN8 102 aa12.58□□□□□ -0.39
CUX2-201ENST00000261726 C1orf210Q8IVY1 113 aa12.58□□□□□ -0.39
CUX2-201ENST00000261726 HARBI1Q96MB7 349 aa12.58□□□□□ -0.39
CUX2-201ENST00000261726 VSTM2LQ96N03 204 aa12.58□□□□□ -0.39
CUX2-201ENST00000261726 POLR2AP24928 1970 aaKnown RBP12.58□□□□□ -0.4
CUX2-201ENST00000261726 SNRPCP09234 159 aaKnown RBP12.58□□□□□ -0.4
CUX2-201ENST00000261726 CADM4Q8NFZ8 388 aa12.58□□□□□ -0.4
CUX2-201ENST00000261726 PRDM14Q9GZV8 571 aa12.58□□□□□ -0.4
CUX2-201ENST00000261726 HSF4Q9ULV5 492 aa12.58□□□□□ -0.4
CUX2-201ENST00000261726 SHROOM3Q8TF72 1996 aa12.58□□□□□ -0.4
CUX2-201ENST00000261726 OR5AU1Q8NGC0 362 aa12.58□□□□□ -0.4
CUX2-201ENST00000261726 ZG16BQ96DA0 208 aa12.58□□□□□ -0.4
CUX2-201ENST00000261726 ZNF256Q9Y2P7 627 aaPredicted RBP12.58□□□□□ -0.4
CUX2-201ENST00000261726 A0A087X0M5 115 aa12.58□□□□□ -0.4
CUX2-201ENST00000261726 TRAV39A0A0B4J263 110 aa12.58□□□□□ -0.4
CUX2-201ENST00000261726 A0A1B0GX30 115 aa12.58□□□□□ -0.4
CUX2-201ENST00000261726 C16orf82Q7Z2V1 217 aa12.58□□□□□ -0.4
CUX2-201ENST00000261726 A0A1W2PPE3 182 aa12.58□□□□□ -0.4
CUX2-201ENST00000261726 DHRS7CA6NNS2 312 aa12.58□□□□□ -0.4
CUX2-201ENST00000261726 GCGP01275 180 aa12.58□□□□□ -0.4
CUX2-201ENST00000261726 PPP1CCP36873 323 aaKnown RBP12.58□□□□□ -0.4
CUX2-201ENST00000261726 PACRGQ96M98 296 aaPredicted RBP12.58□□□□□ -0.4
CUX2-201ENST00000261726 MPC1Q9Y5U8 109 aa12.58□□□□□ -0.4
CUX2-201ENST00000261726 COL4A5P29400 1685 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 PAGE4O60829 102 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 LOXL3P58215 753 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 KHDC3LQ587J8 217 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 LINC01465Q8N7H1 131 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 RPP25Q9BUL9 199 aaKnown RBP12.57□□□□□ -0.4
CUX2-201ENST00000261726 IFITM10A6NMD0 228 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 SOCS1O15524 211 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 IZUMO4Q1ZYL8 232 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 ZNF770Q6IQ21 691 aaPredicted RBP12.57□□□□□ -0.4
CUX2-201ENST00000261726 SSX8Q7RTT4 187 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 GBGT1Q8N5D6 347 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 MRGPRX3Q96LB0 322 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 TNS1Q9HBL0 1735 aaKnown RBP12.57□□□□□ -0.4
CUX2-201ENST00000261726 M0R296 226 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 CT62P0C5K7 136 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 RRN3P1Q2M238 152 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 THSD4Q6ZMP0 1018 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 LDLRAD3Q86YD5 345 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 OR4D9Q8NGE8 314 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 ACAA1P09110 424 aaPredicted RBP12.57□□□□□ -0.4
CUX2-201ENST00000261726 PNLIPP16233 465 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 GUCA2BQ16661 112 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 TMEM255AQ5JRV8 349 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 CBLN3Q6UW01 205 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 STARD4Q96DR4 205 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 ZNF552Q9H707 407 aaPredicted RBP12.57□□□□□ -0.4
CUX2-201ENST00000261726 CCL28Q9NRJ3 127 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 IGKV3D-11A0A0A0MRZ8 115 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 IGKV3-11P04433 115 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 BTF3P20290 206 aaKnown RBP12.57□□□□□ -0.4
CUX2-201ENST00000261726 P2RY1P47900 373 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 COMPP49747 757 aaPredicted RBP12.57□□□□□ -0.4
CUX2-201ENST00000261726 RPS4Y2Q8TD47 263 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 ZNF665Q9H7R5 613 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms