RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 LIPCP11150 499 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 UGT2B7P16662 529 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 ZNF17P17021 662 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 PVALBP20472 110 aaPredicted RBP2.94□□□□□ -1.94
CCDC54-201ENST00000261058 HTR1EP28566 365 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 ARL2P36404 184 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 PIGPP57054 158 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 TCTAP57738 103 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 KRTAP12-2P59991 146 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 RAB5BP61020 215 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 NCALDP61601 193 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 GNG3P63215 75 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 ECH1Q13011 328 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 SURF2Q15527 256 aaPredicted RBP2.94□□□□□ -1.94
CCDC54-201ENST00000261058 PRSS8Q16651 343 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 GUCA2BQ16661 112 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 PYCR3Q53H96 274 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 TMEM128Q5BJH2 165 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 TPTE2P1Q5T6R2 138 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 DUX4L9Q6RFH8 374 aaPredicted RBP2.94□□□□□ -1.94
CCDC54-201ENST00000261058 C6orf120Q7Z4R8 191 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 FAM19A5Q7Z5A7 132 aaPredicted RBP2.94□□□□□ -1.94
CCDC54-201ENST00000261058 SLC30A8Q8IWU4 369 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 SPICQ8N5J4 248 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 ACOT4Q8N9L9 421 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 OR2A1Q8NGT9 310 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 OR13G1Q8NGZ3 307 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 OR1P1Q8NH06 330 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 DCUN1D4Q92564 292 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 CMBLQ96DG6 245 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 OR10C1Q96KK4 312 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 RBP7Q96R05 134 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 GPR22Q99680 433 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 PDCD1LG2Q9BQ51 273 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 MRPL45Q9BRJ2 306 aaKnown RBP2.94□□□□□ -1.94
CCDC54-201ENST00000261058 C1orf50Q9BV19 199 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 CDCA4Q9BXL8 241 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 HES7Q9BYE0 225 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 REEP1Q9H902 201 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 SLCO1B3Q9NPD5 702 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 MMP26Q9NRE1 261 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 AIG1Q9NVV5 245 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 MED9Q9NWA0 146 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 MED11Q9P086 117 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 VPS29Q9UBQ0 182 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 DUX4Q9UBX2 424 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 JPT1Q9UK76 154 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 VPREB3Q9UKI3 123 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 CES1P1Q9UKY3 287 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 NEU3Q9UQ49 428 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 SLC35A3Q9Y2D2 325 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 ZFP30Q9Y2G7 519 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 KLF12Q9Y4X4 402 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 OR51B2Q9Y5P1 312 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 V9GY05 133 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 SYNMO15061 1565 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 PCF11O94913 1555 aaKnown RBP2.94□□□□□ -1.94
CCDC54-201ENST00000261058 BICRAQ9NZM4 1560 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 ZNF608Q9ULD9 1512 aaPredicted RBP2.94□□□□□ -1.94
CCDC54-201ENST00000261058 ARHGAP35Q9NRY4 1499 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 MYOM3Q5VTT5 1437 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 TMEM2Q9UHN6 1383 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 ASTN1O14525 1302 aa2.94□□□□□ -1.94
CCDC54-201ENST00000261058 ZNF816-ZNF321PA0A0X1KG74 233 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 PINLYPA6NC86 204 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 OR5H14A6NHG9 310 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 ZNF878C9JN71 531 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 F6UZH7 168 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 C15orf65H3BRN8 121 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 TRAF3IP2O43734 574 aaPredicted RBP2.93□□□□□ -1.94
CCDC54-201ENST00000261058 ORC5O43913 435 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 HAND1O96004 215 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 TYMSP04818 313 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 ARG1P05089 322 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 GIPP09681 153 aaPredicted RBP2.93□□□□□ -1.94
CCDC54-201ENST00000261058 ZNF250P15622 560 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 ALOX5APP20292 161 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 HIST1H1TP22492 207 aaPredicted RBP2.93□□□□□ -1.94
CCDC54-201ENST00000261058 RPS12P25398 132 aaKnown RBP2.93□□□□□ -1.94
CCDC54-201ENST00000261058 RBMXP38159 391 aaKnown RBP2.93□□□□□ -1.94
CCDC54-201ENST00000261058 RAB5CP51148 216 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 FABP6P51161 128 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 TDGF1P3P51864 188 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 DLX6P56179 175 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 ZNF121P58317 390 aaPredicted RBP2.93□□□□□ -1.94
CCDC54-201ENST00000261058 MAXP61244 160 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 PAFAH1B2P68402 229 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 TGFBR3Q03167 851 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 ZNF846Q147U1 533 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 LRRC26Q2I0M4 334 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 PARP15Q460N3 678 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 FAM27D1Q5T7N8 215 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 HBMQ6B0K9 141 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 UGT2A3Q6UWM9 527 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 RNF165Q6ZSG1 346 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 GALNT10Q86SR1 603 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 CBLN2Q8IUK8 224 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 CPNE9Q8IYJ1 553 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 FTMTQ8N4E7 242 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 SMIM20Q8N5G0 67 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms