RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 DTD1Q8TEA8 209 aa7.62□□□□□ -1.19
PTCD3-201ENST00000254630 CCL28Q9NRJ3 127 aa7.62□□□□□ -1.19
PTCD3-201ENST00000254630 NAT8BQ9UHF3 227 aa7.62□□□□□ -1.19
PTCD3-201ENST00000254630 MMP24Q9Y5R2 645 aa7.62□□□□□ -1.19
PTCD3-201ENST00000254630 RALGAPA2Q2PPJ7 1873 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 TEX50A0A1B0GTY4 177 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 POLR2GP62487 172 aaKnown RBP eCLIP7.61□□□□□ -1.19
PTCD3-201ENST00000254630 LILRB1Q8NHL6 650 aaPredicted RBP7.61□□□□□ -1.19
PTCD3-201ENST00000254630 RAB33BQ9H082 229 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 GZMHP20718 246 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 GZMKP49863 264 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 ERVFRD-1P60508 538 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 Q8WTZ3 238 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 RNF133Q8WVZ7 376 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 HARBI1Q96MB7 349 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 PCGF1Q9BSM1 259 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 VAMP8Q9BV40 100 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 CHST5Q9GZS9 411 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 C9orf172C9J069 976 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 FGF5P12034 268 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 HLA-GP17693 338 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 CSF2RBP32927 897 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 ACAA2P42765 397 aaKnown RBP7.61□□□□□ -1.19
PTCD3-201ENST00000254630 CLLU1Q5K131 121 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 ADAMTS17Q8TE56 1095 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 ZNF714Q96N38 554 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 ZNF385AQ96PM9 386 aaKnown RBP7.61□□□□□ -1.19
PTCD3-201ENST00000254630 ANGPTL4Q9BY76 406 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 MS4A7Q9GZW8 240 aaPredicted RBP7.61□□□□□ -1.19
PTCD3-201ENST00000254630 CROCCQ5TZA2 2017 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 SCO1O75880 301 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 PSG2P11465 335 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 USF1P22415 310 aaPredicted RBP7.61□□□□□ -1.19
PTCD3-201ENST00000254630 TEX30Q5JUR7 227 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 CLEC2AQ6UVW9 174 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 KLHDC1Q8N7A1 406 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 SLC26A10Q8NG04 563 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 ZNF426Q9BUY5 554 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 MSL2Q9HCI7 577 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 KLHDC2Q9Y2U9 406 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 OR2W1Q9Y3N9 320 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 ZNF236Q9UL36 1845 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 RAG2P55895 527 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 FOXL2P58012 376 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 LINC00052Q96N35 136 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 NPAS1Q99742 590 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 OR2J1Q9GZK6 312 aa7.61□□□□□ -1.19
PTCD3-201ENST00000254630 KIAA1324LA8MWY0 1029 aaPredicted RBP7.6□□□□□ -1.19
PTCD3-201ENST00000254630 NGFRP08138 427 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 MGPP08493 103 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 FCARP24071 287 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 GPR6P46095 362 aaPredicted RBP7.6□□□□□ -1.19
PTCD3-201ENST00000254630 TMEM50BP56557 158 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 FAM78BQ5VT40 261 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 WDR73Q6P4I2 378 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 SLC35B3Q9H1N7 401 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 CLN8Q9UBY8 286 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 NAT8Q9UHE5 227 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 PILRAQ9UKJ1 303 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 V9GYH0 126 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 SYNGR2O43760 224 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 PPYP01298 95 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 PRDX2P32119 198 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 RBM11P57052 281 aaKnown RBP7.6□□□□□ -1.19
PTCD3-201ENST00000254630 GAMTQ14353 236 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 ZBTB34Q8NCN2 500 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 OR1L6Q8NGR2 347 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 ZPLD1Q8TCW7 415 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 RGS13O14921 159 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 CHST1O43916 411 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 TSPAN2O60636 221 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 PGA4P0DJD7 388 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 ID4P47928 161 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 PSG5Q15238 335 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 SLC25A42Q86VD7 318 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 EIF4E3Q8N5X7 224 aaKnown RBP7.6□□□□□ -1.19
PTCD3-201ENST00000254630 OR4P4Q8NGL7 312 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 PRSS3P2Q8NHM4 247 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 ADAT3Q96EY9 351 aaPredicted RBP7.6□□□□□ -1.19
PTCD3-201ENST00000254630 ZNF107Q9UII5 783 aaPredicted RBP7.6□□□□□ -1.19
PTCD3-201ENST00000254630 ST6GALNAC2Q9UJ37 374 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 NKX2-8O15522 239 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 UPK3AO75631 287 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 RPL30P62888 115 aaKnown RBP7.6□□□□□ -1.19
PTCD3-201ENST00000254630 LSM11P83369 360 aaKnown RBP eCLIP7.6□□□□□ -1.19
PTCD3-201ENST00000254630 NHLH1Q02575 133 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 NHLH2Q02577 135 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 CCDC144NLQ6NUI1 221 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 WFDC3Q8IUB2 231 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 OR4X1Q8NH49 305 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 ANAPC16Q96DE5 110 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 SLC7A10Q9NS82 523 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 DCAF16Q9NXF7 216 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 KLK13Q9UKR3 277 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 WSB1Q9Y6I7 421 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 OR2T8A6NH00 312 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 PRR33A8MZF0 331 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 NPIPB8E9PQR5 432 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 SYNGR1O43759 233 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 SCGB1C2P0DMR2 95 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms