RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 KMT2EQ8IZD2 1858 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 SSSCA1O60232 199 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 ZNF728P0DKX0 622 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 AADACP22760 399 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 DUSP1P28562 367 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 FGF8P55075 233 aaPredicted RBP8.7□□□□□ -1.02
COPB1-201ENST00000249923 CTAG1AP78358 180 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 HERPUD1Q15011 391 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 AAED1Q7RTV5 226 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 LRTM2Q8N967 370 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 BORCS8Q96FH0 119 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 TMPRSS5Q9H3S3 457 aa8.7□□□□□ -1.02
COPB1-201ENST00000249923 TRGC2P03986 189 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 GAPDHP04406 335 aaKnown RBP8.69□□□□□ -1.02
COPB1-201ENST00000249923 RBM11P57052 281 aaKnown RBP8.69□□□□□ -1.02
COPB1-201ENST00000249923 RPL23AP62750 156 aaKnown RBP8.69□□□□□ -1.02
COPB1-201ENST00000249923 S100A12P80511 92 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 IGFBP7Q16270 282 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 PEAR1Q5VY43 1037 aaPredicted RBP8.69□□□□□ -1.02
COPB1-201ENST00000249923 ZNF100Q8IYN0 542 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 MOB3AQ96BX8 217 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 HES7Q9BYE0 225 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 PRRG4Q9BZD6 226 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 PARP11Q9NR21 331 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 C19orf12Q9NSK7 152 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 STARD10Q9Y365 291 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 TSTD3H0UI37 97 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 TAAR5O14804 337 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 JTBO76095 146 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 OTX2P32243 289 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 CASP6P55212 293 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 GAMTQ14353 236 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 SPINK14Q6IE38 97 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 ALKBH2Q6NS38 261 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 ZNF880Q6PDB4 577 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 LHFPL2Q6ZUX7 228 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 MYPOPQ86VE0 399 aaPredicted RBP8.69□□□□□ -1.02
COPB1-201ENST00000249923 SLC35G3Q8N808 338 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 ZNF611Q8N823 705 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 OR1J1Q8NGS3 322 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 IL1F10Q8WWZ1 152 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 SPSB4Q96A44 273 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 OR51M1Q9H341 326 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 IL36GQ9NZH8 169 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 DOCK11Q5JSL3 2073 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 MED13Q9UHV7 2174 aa8.69□□□□□ -1.02
COPB1-201ENST00000249923 A0A1W2PNU3 283 aaPredicted RBP8.68□□□□□ -1.02
COPB1-201ENST00000249923 FOLR3P41439 243 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 ZXDAP98168 799 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 LIAT1Q6ZQX7 453 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 COLCA1Q6ZS62 124 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 DPPA2Q7Z7J5 298 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 OR4D5Q8NGN0 318 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 PIGCQ92535 297 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 FRZBQ92765 325 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 SGCZQ96LD1 299 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 AURKAIP1Q9NWT8 199 aaPredicted RBP8.68□□□□□ -1.02
COPB1-201ENST00000249923 DOK5Q9P104 306 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 TCFL5Q9UL49 500 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 TNRC6AQ8NDV7 1962 aaKnown RBP8.68□□□□□ -1.02
COPB1-201ENST00000249923 A0A087X0M5 115 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 TGIF2-C20orf24A0A0A6YYL0 155 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 IGKV1-6A0A0C4DH72 117 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 A0A1B0GX30 115 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 SMCO3A2RU48 225 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 NUDT19A8MXV4 375 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 C9J4A7 227 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 DNPH1O43598 174 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 LILRA1O75019 489 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 HEXAP06865 529 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 ELLP55199 621 aaPredicted RBP8.68□□□□□ -1.02
COPB1-201ENST00000249923 UCP2P55851 309 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 CNN3Q15417 329 aaKnown RBP8.68□□□□□ -1.02
COPB1-201ENST00000249923 C15orf54Q8N8G6 183 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 OR2V1Q8NHB1 315 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 C1QTNF5Q9BXJ0 243 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 TECTAO75443 2155 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 IGKV1D-13A0A0B4J2D9 117 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 IGKV1-13P0DP09 117 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 HOXA6P31267 233 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 ECI1P42126 302 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 ADIRFQ15847 76 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 PLCXD3Q63HM9 321 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 RTL6Q6ICC9 239 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 TCEAL6Q6IPX3 200 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 BEND4Q6ZU67 534 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 SLC25A26Q70HW3 274 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 TMEM171Q8WVE6 324 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 TIMM10BQ9Y5J6 103 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 R4GN57 208 aa8.68□□□□□ -1.02
COPB1-201ENST00000249923 A0A096LPE4 126 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 A0A1W2PPZ6 126 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 BTBD17A6NE02 478 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 PDCD6O75340 191 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 TRAPPC6AO75865 159 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 TMEM50AO95807 157 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 DANCRP0C864 163 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 BCL3P20749 454 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 ARL6IP1Q15041 203 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 C20orf204Q6ZNR8 217 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms