RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 KIAA1217Q5T5P2 1943 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 F5H697 171 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 THBS4P35443 961 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 YPEL5P62699 121 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 SPATA45Q537H7 98 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 TMEM97Q5BJF2 176 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 VN1R4Q7Z5H5 301 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 COMMD5Q9GZQ3 224 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 HES4Q9HCC6 221 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 IGKV1D-16P01601 117 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 ADRA2AP08913 450 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 PCP4P48539 62 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 KMT5CQ86Y97 462 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 TNFSF18Q9UNG2 199 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 DHHO43323 396 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 TGFAP01135 160 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 GP1BAP07359 652 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 HSD17B13Q7Z5P4 300 aaPredicted RBP6.62□□□□□ -1.35
RIF1-201ENST00000243326 OR2M7Q8NG81 312 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 CORO2AQ92828 525 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 ZNF253O75346 499 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 TBX6O95947 436 aaPredicted RBP6.62□□□□□ -1.35
RIF1-201ENST00000243326 CSN1S1P47710 185 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 REG1BP48304 166 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 DMRTA1Q5VZB9 504 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 DHRS13Q6UX07 377 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 CYR61O00622 381 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 RTL8BQ17RB0 113 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 ZNF552Q9H707 407 aaPredicted RBP6.62□□□□□ -1.35
RIF1-201ENST00000243326 ADAMTSL3P82987 1691 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 A6NNC1 897 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 SNURFLB1AK76 121 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 CIDEAO60543 219 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 UBE2V2Q15819 145 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 DEFB109BQ30KR1 87 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 TM4SF20Q53R12 229 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 ASB10Q8WXI3 467 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 RTN4RQ9BZR6 473 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 TMEM196Q5HYL7 178 aa6.62□□□□□ -1.35
RIF1-201ENST00000243326 CIB3Q96Q77 187 aaPredicted RBP6.62□□□□□ -1.35
RIF1-201ENST00000243326 OGG1O15527 345 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 GALR2O43603 387 aaPredicted RBP6.61□□□□□ -1.35
RIF1-201ENST00000243326 APCSP02743 223 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 FAM157CP0CG43 387 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 SDHCQ99643 169 aaPredicted RBP6.61□□□□□ -1.35
RIF1-201ENST00000243326 NRIP2Q9BQI9 281 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 ZNF665Q9H7R5 613 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 MYO9AB2RTY4 2548 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 C5orf52A6NGY3 159 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 SLC22A20A6NK97 555 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 EIF1BO60739 113 aaKnown RBP6.61□□□□□ -1.35
RIF1-201ENST00000243326 POLR2AP24928 1970 aaKnown RBP6.61□□□□□ -1.35
RIF1-201ENST00000243326 PIGBOS1A0A0B4J2F0 54 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 GSTZ1O43708 216 aaPredicted RBP6.61□□□□□ -1.35
RIF1-201ENST00000243326 TMEM50BP56557 158 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 PNLIPRP3Q17RR3 467 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 TSEN54Q7Z6J9 526 aaKnown RBP6.61□□□□□ -1.35
RIF1-201ENST00000243326 ALG1L2C9J202 215 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 GPX7Q96SL4 187 aaPredicted RBP6.61□□□□□ -1.35
RIF1-201ENST00000243326 IMMP2LQ96T52 175 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 GHITMQ9H3K2 345 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 Q9N2K0 584 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 PTPRFP10586 1907 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 TOX3O15405 576 aaPredicted RBP6.61□□□□□ -1.35
RIF1-201ENST00000243326 GCM2O75603 506 aaPredicted RBP6.61□□□□□ -1.35
RIF1-201ENST00000243326 FAM87AP0C7U9 286 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 RPS4Y2Q8TD47 263 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 STARD4Q96DR4 205 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 SPACA9Q96E40 222 aaPredicted RBP6.61□□□□□ -1.35
RIF1-201ENST00000243326 TEX50A0A1B0GTY4 177 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 HMSDA8MTL9 139 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 LY75O60449 1722 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 PRSS1P07477 247 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 ATP6V0CP27449 155 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 PSMB2P49721 201 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 OR52M1Q8NGK5 317 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 FAM216AQ8WUB2 273 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 YLPM1P49750 1951 aaKnown RBP6.61□□□□□ -1.35
RIF1-201ENST00000243326 MESP2Q0VG99 397 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 GUSBP11Q6P575 273 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 TMEM251Q8N6I4 163 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 OR10G8Q8NGN5 311 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 FOXJ2Q9P0K8 574 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 MMACHCQ9Y4U1 282 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 WDR87Q6ZQQ6 2873 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 NUFIP2Q7Z417 695 aaKnown RBP6.61□□□□□ -1.35
RIF1-201ENST00000243326 WFDC3Q8IUB2 231 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 TCTEX1D1Q8N7M0 179 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 ZNF784Q8NCA9 323 aaPredicted RBP6.61□□□□□ -1.35
RIF1-201ENST00000243326 SLC26A10Q8NG04 563 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 PIK3IP1Q96FE7 263 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 DUXBA0A1W2PPF3 345 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 FRG2CA6NGY1 282 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 VSIG8P0DPA2 414 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 RPL7P18124 248 aaKnown RBP6.61□□□□□ -1.35
RIF1-201ENST00000243326 C9orf50Q5SZB4 431 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 HPP00738 406 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 LGALS4P56470 323 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 GALMQ96C23 342 aa6.61□□□□□ -1.35
RIF1-201ENST00000243326 TEX101Q9BY14 249 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms