RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 ABCD4O14678 606 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 RHBDL1O75783 438 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 PMP2P02689 132 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 TK1P04183 234 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 GRPP07492 148 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 GIPP09681 153 aaPredicted RBP11.12□□□□□ -0.63
SLIRP-201ENST00000238688 HLA-GP17693 338 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 ZNF81P51508 661 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 RAP2BP61225 183 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 DHODHQ02127 395 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 BSPH1Q075Z2 132 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 EFNB3Q15768 340 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 NKPD1Q17RQ9 610 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 C4orf46Q504U0 113 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 PAN3Q58A45 887 aaKnown RBP11.12□□□□□ -0.63
SLIRP-201ENST00000238688 SLC22A25Q6T423 547 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 ACP7Q6ZNF0 438 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 LYG2Q86SG7 212 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 C11orf53Q8IXP5 236 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 FAM185AQ8N0U4 392 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 WFDC11Q8NEX6 87 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 OR2Z1Q8NG97 314 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 OR4A4PQ8NGN8 299 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 OR11L1Q8NGX0 322 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 NEK7Q8TDX7 302 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 MEGF10Q96KG7 1140 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 HYLS1Q96M11 299 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 HS3ST6Q96QI5 342 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 EGLN1Q9GZT9 426 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 CHMP1AQ9HD42 196 aaPredicted RBP11.12□□□□□ -0.63
SLIRP-201ENST00000238688 RAB9BQ9NP90 201 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 TAAR3PQ9P1P4 343 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 FLVCR2Q9UPI3 526 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 C14orf166Q9Y224 244 aaKnown RBP11.12□□□□□ -0.63
SLIRP-201ENST00000238688 CSPG4Q6UVK1 2322 aa11.11□□□□□ -0.63
SLIRP-201ENST00000238688 TRAV24A0A0B4J272 114 aa11.11□□□□□ -0.63
SLIRP-201ENST00000238688 OR2AT4A6NND4 320 aa11.11□□□□□ -0.63
SLIRP-201ENST00000238688 TRDCB7Z8K6 153 aa11.11□□□□□ -0.63
SLIRP-201ENST00000238688 F8VVB4 439 aa11.11□□□□□ -0.63
SLIRP-201ENST00000238688 F8VWA3 439 aa11.11□□□□□ -0.63
SLIRP-201ENST00000238688 BOLA2-SMG1P6H3BVE0 249 aa11.11□□□□□ -0.63
SLIRP-201ENST00000238688 OR2A4O95047 310 aa11.11□□□□□ -0.63
SLIRP-201ENST00000238688 DUS4LO95620 317 aaKnown RBP11.11□□□□□ -0.63
SLIRP-201ENST00000238688 HAND1O96004 215 aa11.11□□□□□ -0.63
SLIRP-201ENST00000238688 CTSDP07339 412 aaPredicted RBP11.11□□□□□ -0.63
SLIRP-201ENST00000238688 CD3EP07766 207 aa11.11□□□□□ -0.63
SLIRP-201ENST00000238688 ZNF44P15621 663 aa11.11□□□□□ -0.63
SLIRP-201ENST00000238688 ANXA7P20073 488 aaKnown RBP11.11□□□□□ -0.63
SLIRP-201ENST00000238688 GLRA1P23415 457 aa11.11□□□□□ -0.63
SLIRP-201ENST00000238688 ZNF660Q6AZW8 331 aaPredicted RBP11.11□□□□□ -0.63
SLIRP-201ENST00000238688 LIN54Q6MZP7 749 aa11.11□□□□□ -0.63
SLIRP-201ENST00000238688 MITD1Q8WV92 249 aa11.11□□□□□ -0.63
SLIRP-201ENST00000238688 PIK3IP1Q96FE7 263 aa11.11□□□□□ -0.63
SLIRP-201ENST00000238688 OR2A7Q96R45 310 aa11.11□□□□□ -0.63
SLIRP-201ENST00000238688 PHB2Q99623 299 aa11.11□□□□□ -0.63
SLIRP-201ENST00000238688 MRPL37Q9BZE1 423 aaKnown RBP11.11□□□□□ -0.63
SLIRP-201ENST00000238688 MSL2Q9HCI7 577 aa11.11□□□□□ -0.63
SLIRP-201ENST00000238688 ZNF69Q9UC07 566 aa11.11□□□□□ -0.63
SLIRP-201ENST00000238688 VSIG4Q9Y279 399 aa11.11□□□□□ -0.63
SLIRP-201ENST00000238688 TLN2Q9Y4G6 2542 aa11.11□□□□□ -0.63
SLIRP-201ENST00000238688 NIPBLQ6KC79 2804 aaeCLIP11.11□□□□□ -0.63
SLIRP-201ENST00000238688 ZSCAN5BA6NJL1 495 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 SLC33A1O00400 549 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-201ENST00000238688 FABP7O15540 132 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 B3GALNT1O75752 331 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 OR2H2O95918 312 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 ZBTB25P24278 435 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 DHRS2Q13268 280 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 FCN2Q15485 313 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 ADIPOQQ15848 244 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 CARTPTQ16568 116 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 AADACL3Q5VUY0 350 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 SLC35E4Q6ICL7 350 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 ZNF497Q6ZNH5 498 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 NOXA1Q86UR1 476 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 SLC38A6Q8IZM9 456 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 C12orf45Q8N5I9 185 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-201ENST00000238688 IGFBPL1Q8WX77 278 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 MOB3AQ96BX8 217 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 OR2V2Q96R30 315 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 SYT3Q9BQG1 590 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 CABLES2Q9BTV7 478 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 ZNF436Q9C0F3 470 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-201ENST00000238688 DNTTIP1Q9H147 329 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 MS4A5Q9H3V2 200 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 GSX1Q9H4S2 264 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-201ENST00000238688 TMEM165Q9HC07 324 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 RANGRFQ9HD47 186 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-201ENST00000238688 MBNL3Q9NUK0 354 aaKnown RBP11.1□□□□□ -0.63
SLIRP-201ENST00000238688 WIPI2Q9Y4P8 454 aa11.1□□□□□ -0.63
SLIRP-201ENST00000238688 FN1P02751 2386 aaKnown RBP11.09□□□□□ -0.63
SLIRP-201ENST00000238688 TANC2Q9HCD6 1990 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 hCG_1807616A0A1W2PRN6 198 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 TMEM30CPA0ZSE6 113 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 LRRC30A6NM36 301 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 B9A039 149 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 H0YL77 283 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 M0R233 179 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 FSTL3O95633 263 aa11.09□□□□□ -0.63
SLIRP-201ENST00000238688 LHBP01229 141 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms