RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 AKIRIN1Q9H9L7 192 aaPredicted RBP13.33□□□□□ -0.28
DDX55-201ENST00000238146 FAM86C1Q9NVL1 165 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 A0A1B0GV90 55 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 DUXBA0A1W2PPF3 345 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 SLC22A20A6NK97 555 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 TNFSF11O14788 317 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 KRTAP27-1Q3LI81 207 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 SLC25A26Q70HW3 274 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 ZNF611Q8N823 705 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 SRXN1Q9BYN0 137 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 TMEM242Q9NWH2 141 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 TAAR3PQ9P1P4 343 aa13.33□□□□□ -0.28
DDX55-201ENST00000238146 SDK2Q58EX2 2172 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 A0A1B0GU03 582 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 G3V3Y1 287 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 CLDN34H7C241 214 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 B4GALT1P15291 398 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 CD81P60033 236 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 PKIAP61925 76 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 PSG4Q00888 419 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 HERPUD1Q15011 391 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 MPV17LQ2QL34 196 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 Q6ZS49 121 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 REC114Q7Z4M0 266 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 MEGF10Q96KG7 1140 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 CCL28Q9NRJ3 127 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 TMEM38BQ9NVV0 291 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 C19orf25Q9UFG5 118 aaPredicted RBP13.32□□□□□ -0.28
DDX55-201ENST00000238146 RNF224P0DH78 156 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 PGA5P0DJD9 388 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 CCL3P10147 92 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 DDTP30046 118 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 ZFP36L1Q07352 338 aaKnown RBP13.32□□□□□ -0.28
DDX55-201ENST00000238146 SSX9Q7RTT3 188 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 RCC1LQ96I51 464 aaKnown RBP13.32□□□□□ -0.28
DDX55-201ENST00000238146 PRO1933Q9H354 126 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 PROK2Q9HC23 129 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 Q9N2K0 584 aa13.32□□□□□ -0.28
DDX55-201ENST00000238146 ZFP92A6NM28 416 aa13.31□□□□□ -0.28
DDX55-201ENST00000238146 H3BP45 60 aa13.31□□□□□ -0.28
DDX55-201ENST00000238146 TOX3O15405 576 aaPredicted RBP13.31□□□□□ -0.28
DDX55-201ENST00000238146 CYB5R3P00387 301 aaPredicted RBP13.31□□□□□ -0.28
DDX55-201ENST00000238146 JMJD7P0C870 316 aa13.31□□□□□ -0.28
DDX55-201ENST00000238146 LIFP15018 202 aa13.31□□□□□ -0.28
DDX55-201ENST00000238146 DSCR4P56555 118 aaPredicted RBP13.31□□□□□ -0.28
DDX55-201ENST00000238146 PNRC1Q12796 327 aaPredicted RBP13.31□□□□□ -0.28
DDX55-201ENST00000238146 OR8G1Q15617 311 aa13.31□□□□□ -0.28
DDX55-201ENST00000238146 DBX2Q6ZNG2 339 aa13.31□□□□□ -0.28
DDX55-201ENST00000238146 H1FOOQ8IZA3 346 aaPredicted RBP13.31□□□□□ -0.28
DDX55-201ENST00000238146 FGFBP3Q8TAT2 258 aa13.31□□□□□ -0.28
DDX55-201ENST00000238146 PACRGQ96M98 296 aaPredicted RBP13.31□□□□□ -0.28
DDX55-201ENST00000238146 HIST1H2BLQ99880 126 aa13.31□□□□□ -0.28
DDX55-201ENST00000238146 ZNF665Q9H7R5 613 aa13.31□□□□□ -0.28
DDX55-201ENST00000238146 RPRMQ9NS64 109 aa13.31□□□□□ -0.28
DDX55-201ENST00000238146 CISD1Q9NZ45 108 aaKnown RBP13.31□□□□□ -0.28
DDX55-201ENST00000238146 WNT16Q9UBV4 365 aa13.31□□□□□ -0.28
DDX55-201ENST00000238146 ZNF391Q9UJN7 358 aa13.31□□□□□ -0.28
DDX55-201ENST00000238146 BCL2P10415 239 aa13.31□□□□□ -0.28
DDX55-201ENST00000238146 RPS18P62269 152 aaKnown RBP13.31□□□□□ -0.28
DDX55-201ENST00000238146 FOXO1Q12778 655 aa13.31□□□□□ -0.28
DDX55-201ENST00000238146 TRIM61Q5EBN2 209 aa13.31□□□□□ -0.28
DDX55-201ENST00000238146 ZNF468Q5VIY5 522 aaPredicted RBP13.31□□□□□ -0.28
DDX55-201ENST00000238146 ZNF295-AS1Q8N0V1 137 aa13.31□□□□□ -0.28
DDX55-201ENST00000238146 SSX3Q99909 188 aa13.31□□□□□ -0.28
DDX55-201ENST00000238146 RARRES3Q9UL19 164 aa13.31□□□□□ -0.28
DDX55-201ENST00000238146 A0A0G2JRQ6 117 aa13.3□□□□□ -0.28
DDX55-201ENST00000238146 ZNF816-ZNF321PA0A0X1KG74 233 aa13.3□□□□□ -0.28
DDX55-201ENST00000238146 TUSC2O75896 110 aa13.3□□□□□ -0.28
DDX55-201ENST00000238146 DFFBO76075 338 aa13.3□□□□□ -0.28
DDX55-201ENST00000238146 NAPSAO96009 420 aa13.3□□□□□ -0.28
DDX55-201ENST00000238146 HLA-HP01893 362 aa13.3□□□□□ -0.28
DDX55-201ENST00000238146 STX12Q86Y82 276 aa13.3□□□□□ -0.28
DDX55-201ENST00000238146 OR5D13Q8NGL4 314 aa13.3□□□□□ -0.28
DDX55-201ENST00000238146 SNX22Q96L94 193 aa13.3□□□□□ -0.28
DDX55-201ENST00000238146 ALKBH3Q96Q83 286 aaPredicted RBP13.3□□□□□ -0.28
DDX55-201ENST00000238146 WNT5BQ9H1J7 359 aa13.3□□□□□ -0.28
DDX55-201ENST00000238146 SDF2L1Q9HCN8 221 aa13.3□□□□□ -0.28
DDX55-201ENST00000238146 TRBV24-1A0A075B6N3 115 aa13.3□□□□□ -0.28
DDX55-201ENST00000238146 TGOLN2O43493 480 aa13.3□□□□□ -0.28
DDX55-201ENST00000238146 TNFSF12O43508 249 aa13.3□□□□□ -0.28
DDX55-201ENST00000238146 IFNA5P01569 189 aa13.3□□□□□ -0.28
DDX55-201ENST00000238146 Q8NFD4 153 aa13.3□□□□□ -0.28
DDX55-201ENST00000238146 RSG1Q9BU20 258 aa13.3□□□□□ -0.28
DDX55-201ENST00000238146 VSIRQ9H7M9 311 aa13.3□□□□□ -0.28
DDX55-201ENST00000238146 A0A087X0M5 115 aa13.29□□□□□ -0.28
DDX55-201ENST00000238146 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.29□□□□□ -0.28
DDX55-201ENST00000238146 IGKV1-6A0A0C4DH72 117 aa13.29□□□□□ -0.28
DDX55-201ENST00000238146 A0A1B0GX30 115 aa13.29□□□□□ -0.28
DDX55-201ENST00000238146 TSTD3H0UI37 97 aa13.29□□□□□ -0.28
DDX55-201ENST00000238146 IL2RGP31785 369 aa13.29□□□□□ -0.28
DDX55-201ENST00000238146 RAC1P63000 192 aa13.29□□□□□ -0.28
DDX55-201ENST00000238146 SLC25A24Q6NUK1 477 aa13.29□□□□□ -0.28
DDX55-201ENST00000238146 LCN15Q6UWW0 184 aa13.29□□□□□ -0.28
DDX55-201ENST00000238146 C17orf78Q8N4C9 275 aa13.29□□□□□ -0.28
DDX55-201ENST00000238146 CA5BP1Q8WTZ4 195 aa13.29□□□□□ -0.28
DDX55-201ENST00000238146 HS3ST6Q96QI5 342 aa13.29□□□□□ -0.28
DDX55-201ENST00000238146 OR2H1Q9GZK4 316 aa13.29□□□□□ -0.28
DDX55-201ENST00000238146 EDN3P14138 238 aa13.29□□□□□ -0.28
DDX55-201ENST00000238146 MDKP21741 143 aaPredicted RBP13.29□□□□□ -0.28
DDX55-201ENST00000238146 TMEM267Q0VDI3 215 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms