RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 OR4A4PQ8NGN8 299 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 RXFP4Q8TDU9 374 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 FOXJ2Q9P0K8 574 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 IL36RNQ9UBH0 155 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 CHST1O43916 411 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 TIMM8AO60220 97 aaPredicted RBP12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 DFFBO76075 338 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 CRYBA1P05813 215 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 VDAC1P21796 283 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 RAB13P51153 203 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 MPV17LQ2QL34 196 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 ABLIM2Q6H8Q1 611 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 TMEM105Q8N8V8 129 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 OR5A2Q8NGI9 324 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 GPR87Q9BY21 358 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 OPA3Q9H6K4 179 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 RCC2Q9P258 522 aaKnown RBP12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 IL17BQ9UHF5 180 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 ATG2AQ2TAZ0 1938 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 LYZL6O75951 148 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 FOXG1P55316 489 aaPredicted RBP12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 HIST1H3AP68431 136 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 AWAT1Q58HT5 328 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 HIST2H3PS2Q5TEC6 136 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 LCN15Q6UWW0 184 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 HIST2H3AQ71DI3 136 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 OR1J1Q8NGS3 322 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 IP6K3Q96PC2 410 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 TRIB1Q96RU8 372 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 SH3BGRL3Q9H299 93 aa12.88□□□□□ -0.35
UBE2D4-201ENST00000222402 DIDO1Q9BTC0 2240 aaKnown RBP12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 EML6Q6ZMW3 1958 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 TXNL1O43396 289 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 TAGLN2P37802 199 aaKnown RBP12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 TMEM267Q0VDI3 215 aaPredicted RBP12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 ZNF674Q2M3X9 581 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 DHRS11Q6UWP2 260 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 COMMD1Q8N668 190 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 ZNF552Q9H707 407 aaPredicted RBP12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 PRSS50Q9UI38 385 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 OR5B21A6NL26 309 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 HBE1P02100 147 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 ROS1P08922 2347 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 NTF4P34130 210 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 DYNLT3P51808 116 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 B3GALT5-AS1P59052 145 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 HES3Q5TGS1 186 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 GALNT14Q96FL9 552 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 TMEM222Q9H0R3 208 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 GNG13Q9P2W3 67 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 MPC1Q9Y5U8 109 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 H7C1Q1 480 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 SH2D1BO14796 132 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 HOXA6P31267 233 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 HBG1P69891 147 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 HBG2P69892 147 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 ZNF766Q5HY98 468 aa12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 RBMXL1Q96E39 390 aaKnown RBP12.87□□□□□ -0.35
UBE2D4-201ENST00000222402 CEACAM18A8MTB9 384 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 DKK1O94907 266 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 IFNA17P01571 189 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 ATP6V0CP27449 155 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 ELLP55199 621 aaPredicted RBP12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 ZNF154Q13106 437 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 NUFIP2Q7Z417 695 aaKnown RBP12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 C12orf57Q99622 126 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 NIPSNAP3BQ9BS92 247 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 SLC35B3Q9H1N7 401 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 ZNF703Q9H7S9 590 aaPredicted RBP12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 SMCO3A2RU48 225 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 ARG1P05089 322 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 TUBG1P23258 451 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 FABP6P51161 128 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 FOXL2NBQ6ZUU3 175 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 C5orf24Q7Z6I8 188 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 FAM24BQ8N5W8 94 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 CACNG5Q9UF02 275 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 C21orf140B9A014 251 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 SP1P08047 785 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 SPP1P10451 314 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 RAB11AP62491 216 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 EDDM3AQ14507 147 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 MDP1Q86V88 176 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 BARX1Q9HBU1 254 aaPredicted RBP12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 DUSP13Q9UII6 198 aa12.86□□□□□ -0.35
UBE2D4-201ENST00000222402 C7orf77A4D0Y5 90 aa12.85□□□□□ -0.35
UBE2D4-201ENST00000222402 CDIPTO14735 213 aa12.85□□□□□ -0.35
UBE2D4-201ENST00000222402 OR2C1O95371 312 aa12.85□□□□□ -0.35
UBE2D4-201ENST00000222402 KCNJ3P48549 501 aa12.85□□□□□ -0.35
UBE2D4-201ENST00000222402 RUNX1Q01196 453 aa12.85□□□□□ -0.35
UBE2D4-201ENST00000222402 ZNF818PQ6ZRF7 136 aa12.85□□□□□ -0.35
UBE2D4-201ENST00000222402 OR10V1Q8NGI7 309 aa12.85□□□□□ -0.35
UBE2D4-201ENST00000222402 SMIM8Q96KF7 97 aa12.85□□□□□ -0.35
UBE2D4-201ENST00000222402 C1QTNF5Q9BXJ0 243 aa12.85□□□□□ -0.35
UBE2D4-201ENST00000222402 ANAPC10Q9UM13 185 aa12.85□□□□□ -0.35
UBE2D4-201ENST00000222402 IFNA1P01562 189 aa12.85□□□□□ -0.35
UBE2D4-201ENST00000222402 TMEM252Q8N6L7 170 aa12.85□□□□□ -0.35
UBE2D4-201ENST00000222402 TUBD1Q9UJT1 453 aa12.85□□□□□ -0.35
UBE2D4-201ENST00000222402 RPS2P15880 293 aaKnown RBP12.85□□□□□ -0.35
UBE2D4-201ENST00000222402 ACP1P24666 158 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms