RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 CAMLGP49069 296 aa18.99■□□□□ 0.63
CCDC9-201ENST00000221922 NHLH2Q02577 135 aa18.99■□□□□ 0.63
CCDC9-201ENST00000221922 CLN3Q13286 438 aa18.99■□□□□ 0.63
CCDC9-201ENST00000221922 FAM185AQ8N0U4 392 aa18.99■□□□□ 0.63
CCDC9-201ENST00000221922 SLC35G3Q8N808 338 aa18.99■□□□□ 0.63
CCDC9-201ENST00000221922 OR1K1Q8NGR3 316 aa18.99■□□□□ 0.63
CCDC9-201ENST00000221922 FGF23Q9GZV9 251 aaPredicted RBP18.99■□□□□ 0.63
CCDC9-201ENST00000221922 C19orf12Q9NSK7 152 aa18.99■□□□□ 0.63
CCDC9-201ENST00000221922 PRSS50Q9UI38 385 aa18.99■□□□□ 0.63
CCDC9-201ENST00000221922 RCL1Q9Y2P8 373 aaKnown RBP18.99■□□□□ 0.63
CCDC9-201ENST00000221922 PCP4L1A6NKN8 68 aa18.98■□□□□ 0.63
CCDC9-201ENST00000221922 CD300LBA8K4G0 201 aa18.98■□□□□ 0.63
CCDC9-201ENST00000221922 CDS2O95674 445 aa18.98■□□□□ 0.63
CCDC9-201ENST00000221922 IFNA4P05014 189 aa18.98■□□□□ 0.63
CCDC9-201ENST00000221922 SRPXP78539 464 aa18.98■□□□□ 0.63
CCDC9-201ENST00000221922 ZNF616Q08AN1 781 aa18.98■□□□□ 0.63
CCDC9-201ENST00000221922 ETV3LQ6ZN32 361 aa18.98■□□□□ 0.63
CCDC9-201ENST00000221922 C3orf85A0A1B0GTC6 90 aa18.97■□□□□ 0.63
CCDC9-201ENST00000221922 ANKRD30BLA7E2S9 258 aa18.97■□□□□ 0.63
CCDC9-201ENST00000221922 NGFP01138 241 aa18.97■□□□□ 0.63
CCDC9-201ENST00000221922 FBXW9Q5XUX1 488 aa18.97■□□□□ 0.63
CCDC9-201ENST00000221922 IGFL2Q6UWQ7 119 aa18.97■□□□□ 0.63
CCDC9-201ENST00000221922 CLCC1Q96S66 551 aa18.97■□□□□ 0.63
CCDC9-201ENST00000221922 SH3BGRL3Q9H299 93 aa18.97■□□□□ 0.63
CCDC9-201ENST00000221922 PLK3Q9H4B4 646 aa18.97■□□□□ 0.63
CCDC9-201ENST00000221922 C12orf49Q9H741 205 aa18.97■□□□□ 0.63
CCDC9-201ENST00000221922 MPC1Q9Y5U8 109 aa18.97■□□□□ 0.63
CCDC9-201ENST00000221922 FHITP49789 147 aa18.97■□□□□ 0.63
CCDC9-201ENST00000221922 SRSF6Q13247 344 aaKnown RBP18.97■□□□□ 0.63
CCDC9-201ENST00000221922 HABP2Q14520 560 aaPredicted RBP18.97■□□□□ 0.63
CCDC9-201ENST00000221922 GNMTQ14749 295 aa18.97■□□□□ 0.63
CCDC9-201ENST00000221922 LINC00596Q86U02 117 aa18.97■□□□□ 0.63
CCDC9-201ENST00000221922 C2CD4CQ8TF44 421 aa18.97■□□□□ 0.63
CCDC9-201ENST00000221922 BOD1Q96IK1 185 aa18.97■□□□□ 0.63
CCDC9-201ENST00000221922 TMEM222Q9H0R3 208 aa18.97■□□□□ 0.63
CCDC9-201ENST00000221922 TUBA4BQ9H853 241 aa18.97■□□□□ 0.63
CCDC9-201ENST00000221922 CRIM1Q9NZV1 1036 aa18.97■□□□□ 0.63
CCDC9-201ENST00000221922 TRDCB7Z8K6 153 aa18.96■□□□□ 0.63
CCDC9-201ENST00000221922 IL18BPO95998 194 aa18.96■□□□□ 0.63
CCDC9-201ENST00000221922 IGSF11Q5DX21 431 aa18.96■□□□□ 0.63
CCDC9-201ENST00000221922 FDCSPQ8NFU4 85 aa18.96■□□□□ 0.63
CCDC9-201ENST00000221922 BCL2L2Q92843 193 aaPredicted RBP18.96■□□□□ 0.63
CCDC9-201ENST00000221922 C14orf79Q96F83 325 aa18.96■□□□□ 0.63
CCDC9-201ENST00000221922 TMEM56Q96MV1 263 aa18.96■□□□□ 0.63
CCDC9-201ENST00000221922 C12orf57Q99622 126 aa18.96■□□□□ 0.63
CCDC9-201ENST00000221922 TMEM56-RWDD3S4R434 201 aa18.96■□□□□ 0.63
CCDC9-201ENST00000221922 OR5B21A6NL26 309 aa18.96■□□□□ 0.63
CCDC9-201ENST00000221922 IGHG3P01860 377 aa18.96■□□□□ 0.63
CCDC9-201ENST00000221922 GNRHRP30968 328 aa18.96■□□□□ 0.63
CCDC9-201ENST00000221922 CCL11P51671 97 aa18.96■□□□□ 0.63
CCDC9-201ENST00000221922 EWSR1Q01844 656 aaKnown RBP eCLIP18.96■□□□□ 0.636e-7■■■■□ 25.8
CCDC9-201ENST00000221922 RNF212Q495C1 297 aa18.96■□□□□ 0.63
CCDC9-201ENST00000221922 ZFP82Q8N141 532 aa18.96■□□□□ 0.63
CCDC9-201ENST00000221922 BATF2Q8N1L9 274 aa18.96■□□□□ 0.63
CCDC9-201ENST00000221922 SFT2D1Q8WV19 159 aa18.96■□□□□ 0.63
CCDC9-201ENST00000221922 OR5P3Q8WZ94 311 aa18.96■□□□□ 0.63
CCDC9-201ENST00000221922 HIST1H2BAQ96A08 127 aa18.96■□□□□ 0.63
CCDC9-201ENST00000221922 USB1Q9BQ65 265 aaKnown RBP18.96■□□□□ 0.63
CCDC9-201ENST00000221922 SPACA1Q9HBV2 294 aa18.96■□□□□ 0.63
CCDC9-201ENST00000221922 RPS10P5Q9NQ39 176 aa18.96■□□□□ 0.63
CCDC9-201ENST00000221922 MTCH1Q9NZJ7 389 aa18.96■□□□□ 0.63
CCDC9-201ENST00000221922 NAPSAO96009 420 aa18.95■□□□□ 0.62
CCDC9-201ENST00000221922 RAB5BP61020 215 aa18.95■□□□□ 0.62
CCDC9-201ENST00000221922 RND3P61587 244 aa18.95■□□□□ 0.62
CCDC9-201ENST00000221922 HIKESHIQ53FT3 197 aa18.95■□□□□ 0.62
CCDC9-201ENST00000221922 MEX3BQ6ZN04 569 aaKnown RBP18.95■□□□□ 0.62
CCDC9-201ENST00000221922 ZNF573Q86YE8 665 aa18.95■□□□□ 0.62
CCDC9-201ENST00000221922 Q9N2K0 584 aa18.95■□□□□ 0.62
CCDC9-201ENST00000221922 PTPRBP23467 1997 aa18.95■□□□□ 0.62
CCDC9-201ENST00000221922 A0A1B0GW64 132 aa18.94■□□□□ 0.62
CCDC9-201ENST00000221922 C7orf77A4D0Y5 90 aa18.94■□□□□ 0.62
CCDC9-201ENST00000221922 NKX2-6A6NCS4 301 aa18.94■□□□□ 0.62
CCDC9-201ENST00000221922 C1QL1O75973 258 aa18.94■□□□□ 0.62
CCDC9-201ENST00000221922 PRH1P02810 166 aa18.94■□□□□ 0.62
CCDC9-201ENST00000221922 PTAFRP25105 342 aa18.94■□□□□ 0.62
CCDC9-201ENST00000221922 PMP22Q01453 160 aa18.94■□□□□ 0.62
CCDC9-201ENST00000221922 AWAT1Q58HT5 328 aa18.94■□□□□ 0.62
CCDC9-201ENST00000221922 HSD17B11Q8NBQ5 300 aa18.94■□□□□ 0.62
CCDC9-201ENST00000221922 EIF5A2Q9GZV4 153 aaKnown RBP18.94■□□□□ 0.62
CCDC9-201ENST00000221922 K7N7A8 449 aa18.94■□□□□ 0.62
CCDC9-201ENST00000221922 ZNHIT1O43257 154 aa18.94■□□□□ 0.62
CCDC9-201ENST00000221922 TK1P04183 234 aa18.94■□□□□ 0.62
CCDC9-201ENST00000221922 WT1P19544 449 aaPredicted RBP18.94■□□□□ 0.62
CCDC9-201ENST00000221922 WNT5AP41221 380 aa18.94■□□□□ 0.62
CCDC9-201ENST00000221922 NOVA1P51513 510 aaKnown RBP18.94■□□□□ 0.62
CCDC9-201ENST00000221922 GNG3P63215 75 aa18.94■□□□□ 0.62
CCDC9-201ENST00000221922 OR2C3Q8N628 320 aa18.94■□□□□ 0.62
CCDC9-201ENST00000221922 GMPPAQ96IJ6 420 aaPredicted RBP18.94■□□□□ 0.62
CCDC9-201ENST00000221922 RIMS4Q9H426 269 aaPredicted RBP18.94■□□□□ 0.62
CCDC9-201ENST00000221922 KIR2DS1A0A191URI9 304 aa18.93■□□□□ 0.62
CCDC9-201ENST00000221922 J3QW42 95 aa18.93■□□□□ 0.62
CCDC9-201ENST00000221922 MT-ND4LP03901 98 aa18.93■□□□□ 0.62
CCDC9-201ENST00000221922 AKR1C3P42330 323 aa18.93■□□□□ 0.62
CCDC9-201ENST00000221922 KIR2DS4P43632 304 aa18.93■□□□□ 0.62
CCDC9-201ENST00000221922 KIR2DS1Q14954 304 aa18.93■□□□□ 0.62
CCDC9-201ENST00000221922 LFNGQ8NES3 379 aa18.93■□□□□ 0.62
CCDC9-201ENST00000221922 GTF3AQ92664 365 aaKnown RBP18.93■□□□□ 0.62
CCDC9-201ENST00000221922 GLRX2Q9NS18 164 aa18.93■□□□□ 0.62
CCDC9-201ENST00000221922 PRR33A8MZF0 331 aa18.93■□□□□ 0.62
CCDC9-201ENST00000221922 CTAG1AP78358 180 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms