RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 ZNF732B4DXR9 585 aa11.27□□□□□ -0.61
CTNS-201ENST00000046640 NDUFS6O75380 124 aaKnown RBP11.27□□□□□ -0.61
CTNS-201ENST00000046640 SP1P08047 785 aa11.27□□□□□ -0.61
CTNS-201ENST00000046640 FBP1P09467 338 aa11.27□□□□□ -0.61
CTNS-201ENST00000046640 CCL20P78556 96 aa11.27□□□□□ -0.61
CTNS-201ENST00000046640 TMEM187Q14656 261 aa11.27□□□□□ -0.61
CTNS-201ENST00000046640 DAZAP2Q15038 168 aaPredicted RBP11.27□□□□□ -0.61
CTNS-201ENST00000046640 TSC22D1Q15714 1073 aa11.27□□□□□ -0.61
CTNS-201ENST00000046640 SPIN3Q5JUX0 258 aa11.27□□□□□ -0.61
CTNS-201ENST00000046640 SLC2A9Q9NRM0 540 aa11.27□□□□□ -0.61
CTNS-201ENST00000046640 LUZP4Q9P127 313 aa11.27□□□□□ -0.61
CTNS-201ENST00000046640 TUBD1Q9UJT1 453 aa11.27□□□□□ -0.61
CTNS-201ENST00000046640 MRPS18CQ9Y3D5 142 aaKnown RBP11.27□□□□□ -0.61
CTNS-201ENST00000046640 URGCP-MRPS24S4R325 110 aa11.27□□□□□ -0.61
CTNS-201ENST00000046640 SYNGR1O43759 233 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 PDCD6O75340 191 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 WISP2O76076 250 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 SULT1A1P50225 295 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 NSUN5P2Q63ZY6 315 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 TMEM217Q8N7C4 229 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 UBAC2Q8NBM4 344 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 HPSE2Q8WWQ2 592 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 HSF4Q9ULV5 492 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 MMP24Q9Y5R2 645 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 TERTO14746 1132 aaKnown RBP11.26□□□□□ -0.61
CTNS-201ENST00000046640 S100A8P05109 93 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 DANCRP0C864 163 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 FUT3P21217 361 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 AADACP22760 399 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 EIF3IQ13347 325 aaKnown RBP11.26□□□□□ -0.61
CTNS-201ENST00000046640 SURF2Q15527 256 aaPredicted RBP11.26□□□□□ -0.61
CTNS-201ENST00000046640 HAGHQ16775 308 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 C17orf78Q8N4C9 275 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 CCDC54Q8NEL0 328 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 RP1L1Q8IWN7 2480 aaPredicted RBP11.26□□□□□ -0.61
CTNS-201ENST00000046640 IGKV3D-15A0A087WSY6 115 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 C21orf140B9A014 251 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 HS3ST1O14792 307 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 MT-ND4LP03901 98 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 RAB5AP20339 215 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 ARG2P78540 354 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 RTL6Q6ICC9 239 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 FAM180AQ6UWF9 173 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 P4HA3Q7Z4N8 544 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 GCNT2Q8N0V5 402 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 ZNF561Q8N587 486 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 SLC35G3Q8N808 338 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 EDARADDQ8WWZ3 215 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 EXTL1Q92935 676 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 TMEM45BQ96B21 275 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 TP53RKQ96S44 253 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 REPIN1Q9BWE0 567 aaKnown RBP11.26□□□□□ -0.61
CTNS-201ENST00000046640 PLEKHA2Q9HB19 425 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 ZNF286AQ9HBT8 521 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 MTCH1Q9NZJ7 389 aa11.26□□□□□ -0.61
CTNS-201ENST00000046640 CST7O76096 145 aa11.25□□□□□ -0.61
CTNS-201ENST00000046640 GAPDHP04406 335 aaKnown RBP11.25□□□□□ -0.61
CTNS-201ENST00000046640 SCTP09683 121 aa11.25□□□□□ -0.61
CTNS-201ENST00000046640 GLP1RP43220 463 aa11.25□□□□□ -0.61
CTNS-201ENST00000046640 SLC10A1Q14973 349 aa11.25□□□□□ -0.61
CTNS-201ENST00000046640 PPA1Q15181 289 aa11.25□□□□□ -0.61
CTNS-201ENST00000046640 PLA2G2CQ5R387 149 aa11.25□□□□□ -0.61
CTNS-201ENST00000046640 ASCL4Q6XD76 172 aa11.25□□□□□ -0.61
CTNS-201ENST00000046640 PRDM14Q9GZV8 571 aa11.25□□□□□ -0.61
CTNS-201ENST00000046640 TRAV39A0A0B4J263 110 aa11.25□□□□□ -0.61
CTNS-201ENST00000046640 NKX2-6A6NCS4 301 aa11.25□□□□□ -0.61
CTNS-201ENST00000046640 RPS10P46783 165 aaKnown RBP11.25□□□□□ -0.61
CTNS-201ENST00000046640 OR2T2Q6IF00 324 aa11.25□□□□□ -0.61
CTNS-201ENST00000046640 RDH5Q92781 318 aa11.25□□□□□ -0.61
CTNS-201ENST00000046640 RRP8O43159 456 aaKnown RBP11.24□□□□□ -0.61
CTNS-201ENST00000046640 ST8SIA3O43173 380 aa11.24□□□□□ -0.61
CTNS-201ENST00000046640 GPR137BO60478 399 aa11.24□□□□□ -0.61
CTNS-201ENST00000046640 YIF1AO95070 293 aa11.24□□□□□ -0.61
CTNS-201ENST00000046640 COLCA1Q6ZS62 124 aa11.24□□□□□ -0.61
CTNS-201ENST00000046640 OR2G3Q8NGZ4 309 aa11.24□□□□□ -0.61
CTNS-201ENST00000046640 UBALD1Q8TB05 177 aa11.24□□□□□ -0.61
CTNS-201ENST00000046640 OR51M1Q9H341 326 aa11.24□□□□□ -0.61
CTNS-201ENST00000046640 RIF1Q5UIP0 2472 aaKnown RBP11.24□□□□□ -0.61
CTNS-201ENST00000046640 UBE2CO00762 179 aa11.24□□□□□ -0.61
CTNS-201ENST00000046640 SSSCA1O60232 199 aa11.24□□□□□ -0.61
CTNS-201ENST00000046640 CA11O75493 328 aa11.24□□□□□ -0.61
CTNS-201ENST00000046640 DTYMKP23919 212 aa11.24□□□□□ -0.61
CTNS-201ENST00000046640 P2RY1P47900 373 aa11.24□□□□□ -0.61
CTNS-201ENST00000046640 HERV-K104P61576 105 aa11.24□□□□□ -0.61
CTNS-201ENST00000046640 PLP2Q04941 152 aa11.24□□□□□ -0.61
CTNS-201ENST00000046640 ZNF343Q6P1L6 599 aa11.24□□□□□ -0.61
CTNS-201ENST00000046640 LIAT1Q6ZQX7 453 aa11.24□□□□□ -0.61
CTNS-201ENST00000046640 ZDHHC23Q8IYP9 409 aa11.24□□□□□ -0.61
CTNS-201ENST00000046640 SPSB4Q96A44 273 aa11.24□□□□□ -0.61
CTNS-201ENST00000046640 RNF122Q9H9V4 155 aa11.24□□□□□ -0.61
CTNS-201ENST00000046640 ZNF391Q9UJN7 358 aa11.24□□□□□ -0.61
CTNS-201ENST00000046640 SPTBN2O15020 2390 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 MGAQ8IWI9 3026 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 KLRC4-KLRK1H3BQV0 150 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 CLN5O75503 358 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 SELEP16581 610 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 CA6P23280 308 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 RUNX1Q01196 453 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 GNMTQ14749 295 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 SOHLH1Q5JUK2 328 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms