RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 RAB29O14966 203 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 IGLV3-25P01717 112 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 TRGC1P0CF51 173 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 PRR35P0CG20 571 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 FAM189BP81408 668 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 SOX4Q06945 474 aaPredicted RBP5.4□□□□□ -1.54
VPS13D-201ENST00000011700 ZNF770Q6IQ21 691 aaPredicted RBP5.4□□□□□ -1.54
VPS13D-201ENST00000011700 OR10G4Q8NGN3 311 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 OR10G9Q8NGN4 311 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 OR10G7Q8NGN6 311 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 OR51E1Q8TCB6 317 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 MZB1Q8WU39 189 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 TMEM140Q9NV12 185 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 ELF5Q9UKW6 265 aaPredicted RBP5.4□□□□□ -1.54
VPS13D-201ENST00000011700 PSG11Q9UQ72 335 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 TET2Q6N021 2002 aaPredicted RBP5.4□□□□□ -1.54
VPS13D-201ENST00000011700 NPIPB8E9PQR5 432 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 NPY1RP25929 384 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 CA7P43166 264 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 MMP16P51512 607 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 LCN2P80188 198 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 MRPL52Q86TS9 123 aaKnown RBP5.4□□□□□ -1.54
VPS13D-201ENST00000011700 MYPOPQ86VE0 399 aaPredicted RBP5.4□□□□□ -1.54
VPS13D-201ENST00000011700 TUSC5Q8IXB3 177 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 OR1L8Q8NGR8 309 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 C20orf24Q9BUV8 137 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 GGACTQ9BVM4 153 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 HEXA-AS1Q9H8Q6 139 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 PDFQ9HBH1 243 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 SEMG1P04279 462 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 CBR1P16152 277 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 PTNP21246 168 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 ZNF141Q15928 474 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 KIR2DL4Q99706 377 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 PLXNA4Q9HCM2 1894 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 TMEM250H0YL14 139 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 K7ESF4 209 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 CDX1P47902 265 aaPredicted RBP5.4□□□□□ -1.55
VPS13D-201ENST00000011700 FHITP49789 147 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 CLDN12P56749 244 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 MEF2BQ02080 365 aaPredicted RBP5.4□□□□□ -1.55
VPS13D-201ENST00000011700 CT83Q5H943 113 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 C10orf128Q5T292 105 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 C12orf73Q69YU5 71 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 GPR82Q96P67 336 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 C2orf88Q9BSF0 95 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 PEF1Q9UBV8 284 aaKnown RBP5.4□□□□□ -1.55
VPS13D-201ENST00000011700 RBFOX2O43251 390 aaKnown RBP eCLIP5.4□□□□□ -1.555e-8■□□□□ 8.9
VPS13D-201ENST00000011700 NKX2-2O95096 273 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 ZGLP1P0C6A0 271 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 OR1N2Q8NGR9 330 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 C16orf52Q8NHV5 167 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 HSD17B8Q92506 261 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 PIGTQ969N2 578 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 SLC46A2Q9BY10 475 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 CXXC4Q9H2H0 198 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 LPAR2Q9HBW0 351 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 LTB4R2Q9NPC1 389 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 ING1Q9UK53 422 aaPredicted RBP5.4□□□□□ -1.55
VPS13D-201ENST00000011700 SIGLEC7Q9Y286 467 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 APCSP02743 223 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 HSPB1P04792 205 aaKnown RBP5.4□□□□□ -1.55
VPS13D-201ENST00000011700 CSF2RBP32927 897 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 SPRED3Q2MJR0 410 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 NSUN5P2Q63ZY6 315 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 LRRTM3Q86VH5 581 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 SPNS2Q8IVW8 549 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 TDHQ8IZJ6 230 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 C11orf42Q8N5U0 333 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 TMEM251Q8N6I4 163 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 OR2I1PQ8NGU4 316 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 ZG16BQ96DA0 208 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 ZNF768Q9H5H4 540 aaKnown RBP5.4□□□□□ -1.55
VPS13D-201ENST00000011700 CLEC2DQ9UHP7 191 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 MMP17Q9ULZ9 603 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 A0A1W2PQM1 296 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 GNG7O60262 68 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 OR2J2O76002 312 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 AKR7A3O95154 331 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 MYBPHQ13203 477 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 P2RY6Q15077 328 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 DEFB110Q30KQ9 67 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 Q56UQ5 140 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 CEACAM6P40199 344 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 DHRS13Q6UX07 377 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 BVESQ8NE79 360 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 OR10D4PQ8NGN7 298 aa5.4□□□□□ -1.55
VPS13D-201ENST00000011700 MRPL32Q9BYC8 188 aaKnown RBP5.4□□□□□ -1.55
VPS13D-201ENST00000011700 ODAMA1E959 279 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 COX5BP10606 129 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 ABHD3Q8WU67 409 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 MRAP2Q96G30 205 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 C11orf68Q9H3H3 251 aaKnown RBP5.39□□□□□ -1.55
VPS13D-201ENST00000011700 NPVFQ9HCQ7 196 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 LRP12Q9Y561 859 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 DHHO43323 396 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 SYNGR2O43760 224 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 LYZL6O75951 148 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 DGCR2P98153 550 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 COX20Q5RI15 118 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms