RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Vstm2bQ9JME9 285 aa11.76□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Ldlrad3A2AR95 345 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Tlx3O55144 291 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Fkbp2P45878 140 aaKnown RBP11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Hmga2P52927 108 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Rab3aP63011 220 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Fndc4Q3TR08 231 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Sec14l3Q5SQ27 401 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Pld6Q5SWZ9 221 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Csnk2a1Q60737 391 aaKnown RBP11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 2210407C18RikQ6YI28 220 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Olfr1489Q8VFQ5 313 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 2900055J20RikQ9D6G3 140 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Actl6aQ9Z2N8 429 aaKnown RBP11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Dock9Q8BIK4 2055 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Ccdc9bA3KGF9 545 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Vmn2r82G3UWA2 865 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Gm21818J3KMS6 170 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Phb2O35129 299 aaKnown RBP11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 HckP08103 524 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Cd40lgP27548 260 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Ccr2P51683 373 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 AgrpP56473 131 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 KcnrgQ2TUM3 264 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Olfr803Q8VFI3 308 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Olfr992Q8VGC6 309 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Ubl7Q91W67 380 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Tspan2Q922J6 221 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Hspb2Q99PR8 182 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Pttg1Q9CQJ7 199 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 PsenenQ9CQR7 101 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Dram2Q9CR48 267 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Utp23Q9CX11 249 aaKnown RBP11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Eif1bQ9CXU9 113 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Tmem225Q9D9S2 230 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Tex29Q9DA77 186 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Bex3Q9WTZ9 124 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Clec4dQ9Z2H6 219 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Gm26992S4R1A3 76 aa11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Urb1Q571H0 2274 aaKnown RBP11.75□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Gm14409A2ARR8 349 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Olfr1029A2ATE0 324 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Mmp27D3YV89 551 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Gm15737D3YZR0 106 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Gm8126E9Q1N7 198 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 CtsbP10605 339 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 FgrP14234 517 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 TaglnP37804 201 aaKnown RBP11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Cnr1P47746 473 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Ear2P97425 156 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Dok1P97465 482 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Rhox4fQ2MDF8 205 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Rhox4cQ2MDG1 205 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Olfr1028Q7TR89 324 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Rrnad1Q8BZG5 475 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Nsun5Q8K4F6 465 aaKnown RBP11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Vmn1r229Q8R2A9 306 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Lpcat3Q91V01 487 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Rhox4aQ9D3I8 205 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Tnfrsf19Q9JLL3 416 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Gm21294A0A087WS79 222 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Gm10358A0A1D5RLD8 333 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Vmn1r174E9PYW5 313 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Igh-VJ558P01758 117 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 GapdhP16858 333 aaKnown RBP11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Ca6P18761 317 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Rasl12Q08AT1 266 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Lefty1Q64280 368 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Kiaa1456Q80WQ4 447 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Tacstd2Q8BGV3 317 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 SowahbQ8BZW2 760 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Gtf2f2Q8R0A0 249 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Vmn1r193Q8R258 319 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Phospho1Q8R2H9 267 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 C8gQ8VCG4 202 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Olfr1254Q8VFB1 314 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Olfr777Q8VFH3 311 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Tram1Q91V04 374 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Rtn4rQ99PI8 473 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Il36bQ9D6Z6 183 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Gm3839S4R1W1 333 aa11.74□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Gm21488A0A087WR99 222 aa11.73□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Gm45716A0A1B0GRQ0 93 aa11.73□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Dgat2l6A2ADU8 337 aa11.73□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Zfp961E9Q4R5 444 aa11.73□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Vmn1r7E9Q8T0 311 aa11.73□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Slc17a3G3UWD9 498 aa11.73□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Efna4O08542 206 aa11.73□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Fli1P26323 452 aa11.73□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Rac3P60764 192 aa11.73□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Tmem104Q3TB48 496 aa11.73□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Glt8d1Q6NSU3 371 aa11.73□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Olfr1283Q7TQY4 305 aa11.73□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Olfr107Q7TRK4 309 aa11.73□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Klhl24Q8BRG6 600 aa11.73□□□□□ -0.53
Rnf4-204ENSMUST00000182047 NaxeQ8K4Z3 282 aa11.73□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Tmem234Q8R1E7 140 aa11.73□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Calhm2Q8VEC4 323 aa11.73□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Gdf15Q9Z0J7 303 aa11.73□□□□□ -0.53
Rnf4-204ENSMUST00000182047 Unc119Q9Z2R6 240 aa11.73□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 44.6 ms