RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Zfp429Q7M6Y0 485 aa8.61□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Cnot4Q8BT14 575 aaKnown RBP8.61□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 March11Q8CBH7 400 aa8.61□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Slc25a1Q8JZU2 311 aa8.61□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Vmn1r73Q8R293 303 aa8.61□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Commd5Q8R395 224 aa8.61□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Olfr1377Q8VGH1 307 aa8.61□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Olfr46Q8VGJ4 318 aa8.61□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Cavin3Q91VJ2 260 aa8.61□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Glo1Q9CPU0 184 aa8.61□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Tmem42Q9CR22 157 aa8.61□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 NubplQ9CWD8 319 aa8.61□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 MtfmtQ9D799 386 aa8.61□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Gng13Q9JMF3 67 aa8.61□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Cln8Q9QUK3 288 aa8.61□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Angptl4Q9Z1P8 410 aa8.61□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Gm11361A0A1Y7VKY1 152 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Gm16368A0A1Y7VNG9 144 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Kiaa1324A2AFS3 1009 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Npffr1E9Q468 432 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Ccr6O54689 367 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Rps18P62270 152 aaKnown RBP8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Rps10P63325 165 aaKnown RBP8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Rasl2-9Q61820 216 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 St8sia1Q64687 355 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Ptpmt1Q66GT5 193 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Dact2Q7TN08 757 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Actbl2Q8BFZ3 376 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 SargQ8BI29 606 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Depp1Q8K2F3 205 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Vmn1r183Q8K3N5 305 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Tmem144Q8VEH0 348 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Nmnat3Q99JR6 245 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 GhsrQ99P50 364 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Ackr1Q9QUI6 334 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Olfr155Q9QZ22 319 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Cx3cr1Q9Z0D9 354 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Olfr1089A0A1L1SRK6 311 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Ceacam16E9QA28 426 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Olfr773F6VS78 311 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Gm21972J3QN38 98 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Lef1P27782 397 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Mas1P30554 324 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 LepP41160 167 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 RidaP52760 135 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Lbx1P52955 282 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Gm813Q3UWK9 176 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Ewsr1Q61545 655 aaKnown RBP8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Znf511Q6P0X2 227 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Med16Q6PGF3 828 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Parp16Q7TMM8 322 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Olfr1137Q7TR40 310 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Olfr901Q7TRD1 311 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Mrpl22Q8BU88 206 aaKnown RBP8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Neurl3Q8CJC5 254 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Vmn1r220Q8R272 298 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 RabepkQ8VCH5 380 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Olfr772Q8VGC5 311 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Lhfpl3Q9CTN8 222 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Unc119Q9Z2R6 240 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Fbxw27A0A1D5RLF0 466 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Fndc7A2AED3 737 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Gm9047B9EJX3 177 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Olfr243E9PV96 316 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Gm21976J3QNN2 249 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Vmn2r66K7N6R9 851 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 P01637 128 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Prkar2aP12367 401 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Tcl1aP56280 116 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 SnrpeP62305 92 aaKnown RBP8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Rasd2P63032 266 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Nhlh1Q02576 133 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Mfsd4b3Q3UN21 355 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Slc22a14Q497L9 629 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Nxph1Q61200 271 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 JkampQ8BI36 311 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 4930451G09RikQ8C5G4 195 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Syngr3Q8R191 229 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 SptssaQ8R207 71 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Vmn1r211Q8R266 298 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Dmbx1Q91ZK4 381 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Olfr702Q920Z2 318 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Q9DAE7 121 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Zfand6Q9DCH6 223 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Olfr710Q9EP55 310 aa8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Tagln2Q9WVA4 199 aaKnown RBP8.6□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Olfr936J3KMV2 267 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Bmi1P25916 324 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Dnase1P49183 284 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Trav5d-4Q5R1F6 114 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Sdhaf2Q8C6I2 164 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Olfr156Q8VGA9 318 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Znf281Q99LI5 893 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Rpusd4Q9CWX4 377 aaKnown RBP8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Syt7Q9R0N7 403 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Gm13769A2ATW2 309 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Gm21783J3QM57 227 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Trav13d-3J3QMG8 112 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 Hbb-bh0P04443 147 aa8.59□□□□□ -1.03
Pcdh1-201ENSMUST00000057185 CryabP23927 175 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 50.7 ms