RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Lime1Q9EQR5 269 aa10.06□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Cx3cr1Q9Z0D9 354 aa10.06□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Plxnb3Q9QY40 1902 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 A0A286YDP4 300 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Fndc10A2A9Q0 223 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Ifna1P01572 189 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Lyz2P08905 148 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 P2ry2P35383 373 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr18Q0VAX9 331 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Scand1Q2M4I6 142 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Hs3st6Q5GFD5 342 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Thap4Q6P3Z3 569 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Zfp933Q6PEE4 468 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Fam117aQ7TNF9 451 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 AmtQ8CFA2 403 aaKnown RBP10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Tsc22d4Q9EQN3 387 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Atoh7Q9Z2E5 149 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Vmn1r180B9EK86 305 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Vmn1r170K7N6W9 304 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Emg1O35130 244 aaKnown RBP10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr1507Q0VEP0 313 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr1287Q7TQY1 305 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Fam53bQ8BGR5 422 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Pla2g3Q8BZT7 504 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr638Q8VH20 321 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Pla1aQ8VI78 456 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Mrpl24Q9CQ06 216 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Slc25a22Q9D6M3 323 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Ms4a4bQ9ES61 226 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Paqr4Q9JJE4 273 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 EdarQ9R187 448 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Pcnx1Q9QYC1 2344 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Gm2075J3QMW5 144 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 EndogO08600 294 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Syt3O35681 587 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Rab18P35293 206 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Gm6760Q0ZNK3 87 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Gpr173Q6PI62 373 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr1412Q8VET3 321 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr512Q8VFZ4 326 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Vmn1r43Q8VIC9 329 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Mus81Q91ZJ0 551 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Elovl1Q9JLJ5 279 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Hnf4gQ9WUU6 408 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Armcx4E9PWM3 2356 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Gm2026A2ART4 498 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 SftpcP21841 193 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 AhsgP29699 345 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 CryzP47199 331 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 VegfbP49766 207 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Hmga2P52927 108 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr5Q60889 312 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 St8sia3Q64689 380 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Igsf21Q7TNR6 468 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr1341Q7TQV4 312 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Tmem127Q8BGP5 238 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Cdadc1Q8BMD5 523 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr1297Q8VGE8 312 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 HypmQ9CR04 117 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Arrdc2Q9D668 407 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Ndufaf3Q9JKL4 185 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Adh4Q9QYY9 377 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 MvkQ9R008 395 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Col6a6Q8C6K9 2265 aa10.05□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Rpl23a-ps3A0A140T8M7 156 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr721-ps1A0A140T8T9 324 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Vmn2r83E9Q0G7 864 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr64F8VPZ8 307 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Efna4O08542 206 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Ntsr1O88319 424 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Hbb-bh0P04443 147 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 CebpbP28033 296 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Rpl23aP62751 156 aaKnown RBP10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Fam173aQ501J2 229 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Ssr4Q62186 172 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr1509Q7TQQ0 308 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr132Q7TRI8 313 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Mrps10Q80ZK0 160 aaKnown RBP10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Edem2Q8BJT9 577 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 B130006D01RikQ8BRH6 153 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr998Q8VF76 314 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr497Q8VG08 314 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Arrdc1Q99KN1 434 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 FcrlsQ9EQY5 509 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Hacd1Q9QY80 281 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Trav15d-1-dv6d-1A0A075B624 124 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Gm3573L7N292 184 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 VtnP29788 478 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 AdmP97297 184 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Ldlrad2Q3V0V0 142 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 MENTQ569E4 350 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Gpatch2Q7TQC7 527 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Prelid1Q8R107 217 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr341Q8VGK9 313 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Yif1aQ91XB7 293 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Pofut1Q91ZW2 393 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Slc25a2Q99ML6 265 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Nsa2Q9CR47 260 aaKnown RBP10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 1700029F12RikQ9CRB4 147 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Mtfp1Q9CRB8 166 aa10.04□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 92 ms