RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 March1Q6NZQ8 289 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Znf728Q6P5C7 752 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Cypt4Q6P925 153 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Olfr399Q7TRX3 311 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Cldn17Q8BXA6 224 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Lrtm1Q8BXQ3 356 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Nfatc4Q8K120 901 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Plrg1Q922V4 513 aaKnown RBP10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Tex43Q9D9I1 141 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 1700013G24RikQ9DAC6 286 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Hspb9Q9DAM3 168 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Mfap5Q9QZJ6 164 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 HnrnpdlQ9Z130 301 aaKnown RBP10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Atoh7Q9Z2E5 149 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Dchs2A0A0A6YW72 3346 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Igkv15-103A0A140T8P3 115 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Gm14403A2BFU4 402 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Opn1mwO35599 359 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 B3galt2O54905 422 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 EhfO70273 300 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Tbx15O70306 602 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 ArafP04627 604 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Stfa1P35175 97 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Tcl1aP56280 116 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Atp5iQ06185 71 aaKnown RBP10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Agbl4Q09LZ8 540 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Q3TEI4 1023 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Zfp772Q3UQL6 416 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Rps27Q6ZWU9 84 aaKnown RBP10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Prss54Q7M756 383 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Muc20Q8BUE7 656 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Dzank1Q8C008 778 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Gm13199Q8C8E0 125 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Q9CRW3 126 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Mtif3Q9CZD5 276 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Ergic1Q9DC16 290 aaKnown RBP10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Reep6Q9JM62 201 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Adam18Q9R157 719 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Opn3Q9WUK7 400 aa10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Mecp2Q9Z2D6 484 aaKnown RBP10.22□□□□□ -0.77
Sdc1-201ENSMUST00000020911 F8Q06194 2319 aa10.21□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Chrna10B2RX82 447 aa10.21□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Gm4141K9J7H2 306 aa10.21□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Olfr741L7N1Y5 311 aa10.21□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Adcyap1O70176 175 aa10.21□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Acrv1P50289 261 aa10.21□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Zdhhc2P59267 366 aa10.21□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Mmp7Q10738 264 aa10.21□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Gm10447Q3UQ92 135 aa10.21□□□□□ -0.77
Sdc1-201ENSMUST00000020911 AccslQ3UX83 580 aa10.21□□□□□ -0.77
Sdc1-201ENSMUST00000020911 SspnQ62147 216 aa10.21□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Saxo2Q8BQB6 394 aa10.21□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Tmem222Q8BVA2 208 aa10.21□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Cdc34Q8CFI2 235 aa10.21□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Vmn1r17Q8R2D8 303 aa10.21□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Calhm2Q8VEC4 323 aa10.21□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Rab30Q923S9 203 aa10.21□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Tmem100Q9CQG9 134 aa10.21□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Xrcc2Q9CX47 278 aa10.21□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Gm11214V9GX06 183 aa10.21□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Dock4P59764 1978 aa10.21□□□□□ -0.77
Sdc1-201ENSMUST00000020911 Cacna1bO55017 2327 aa10.21□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Gm3952A0A0A6YXJ1 191 aa10.21□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Cdc34bA0A140T8I4 237 aa10.21□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Gm13083A2AGW5 501 aa10.21□□□□□ -0.78
Sdc1-201ENSMUST00000020911 PdgfbP31240 241 aa10.21□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Gabrr1P56475 480 aa10.21□□□□□ -0.78
Sdc1-201ENSMUST00000020911 CycsP62897 105 aaKnown RBP10.21□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Olfr429Q7TRW1 312 aa10.21□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Ppp1r3bQ8C767 284 aa10.21□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Hoxc12Q8K5B8 280 aa10.21□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Vmn1r73Q8R293 303 aa10.21□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Plpp7Q91WB2 271 aa10.21□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Fbxo36Q9CQ24 188 aa10.21□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Ier3ip1Q9CR20 82 aa10.21□□□□□ -0.78
Sdc1-201ENSMUST00000020911 PmpcaQ9DC61 524 aa10.21□□□□□ -0.78
Sdc1-201ENSMUST00000020911 AtmQ62388 3066 aa10.21□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Gm17655A0A1B0GT13 591 aa10.2□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Gm21761J3QK00 171 aa10.2□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Pcp2P12660 120 aa10.2□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Defa-rs7P50715 91 aa10.2□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Lsm5P62322 91 aa10.2□□□□□ -0.78
Sdc1-201ENSMUST00000020911 SelenotP62342 195 aa10.2□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Cnn2Q08093 305 aa10.2□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Q0VG62 139 aa10.2□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Olfr1340Q3KPC7 315 aa10.2□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Tex30Q3TUU5 225 aa10.2□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Lin28bQ45KJ6 247 aaKnown RBP10.2□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Spock1Q62288 442 aa10.2□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Psg22Q810J1 475 aa10.2□□□□□ -0.78
Sdc1-201ENSMUST00000020911 RergQ8R367 199 aa10.2□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Olfr109Q8VG96 314 aa10.2□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Mrgpra1Q91WW5 304 aa10.2□□□□□ -0.78
Sdc1-201ENSMUST00000020911 MmdQ9CQY7 238 aa10.2□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Atp6v1fQ9D1K2 119 aa10.2□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Spns3Q9D232 514 aa10.2□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Slc25a27Q9D6D0 322 aa10.2□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Mfsd1Q9DC37 464 aa10.2□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Tmem183Q9JJB9 375 aa10.2□□□□□ -0.78
Sdc1-201ENSMUST00000020911 Fgf21Q9JJN1 210 aa10.2□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms