RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Avpr2O88721 371 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Mdh2P08249 338 aaKnown RBP16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Cd40lgP27548 260 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Eif1P48024 113 aaKnown RBP16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 KcnrgQ2TUM3 264 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 BtlaQ7TSA3 306 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Zfp819Q80V81 607 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Srrm4Q8BKA3 608 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Adamts4Q8BNJ2 833 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Depp1Q8K2F3 205 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 RtbdnQ8QZY4 247 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Olfr1301Q8VGE7 312 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Pink1Q99MQ3 580 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Ms4a4dQ99N05 225 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Q9CYS6 286 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Il36bQ9D6Z6 183 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Ap1s2Q9DB50 160 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Clec6aQ9JKF4 209 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Olfr122W4VSP0 330 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gm17655A0A1B0GT13 591 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Vmn1r138D3YTY2 306 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gm8693E9PW18 306 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Zfp688E9Q5M9 274 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gm4498K9J7G4 306 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Vmn1r118L7N273 306 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Tlx3O55144 291 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Col5a1O88207 1838 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 AhsgP29699 345 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Olfr774Q7TRI5 312 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Atpaf1Q811I0 324 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Arf2Q8BSL7 181 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Dnajb11Q99KV1 358 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 P2ry4Q9JJS7 361 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Fbxw4Q9JMJ2 410 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Fbxo6Q9QZN4 295 aa16.43■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Dhrs3O88876 302 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Hoxb5P09079 269 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Guca2aP33680 116 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gramd2aQ3V3G7 320 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 DbpQ60925 325 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Hes3Q61657 175 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 ZpbpQ62522 350 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Tas2r120Q7M721 295 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Olfr32Q7TQZ0 308 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Edem2Q8BJT9 577 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Sdhaf4Q8BTE0 104 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Olfr168Q8VF05 312 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Zfand6Q9DCH6 223 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Rspo1Q9Z132 265 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gm4858A0A0A6YWS7 318 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Olfr455A0A0B4J1M2 317 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Olfr267A2AM35 313 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Vmn2r82G3UWA2 865 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Tgfbr3O88393 850 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Tcl1aP56280 116 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Rasd2P63032 266 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 H3f3aP84244 136 aaKnown RBP16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 SryQ05738 395 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 N4bp2l1Q3V2Q8 238 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 P4ha3Q6W3F0 542 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Tmem106cQ80VP8 260 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 NelfaQ8BG30 530 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Zfp52Q8BJ45 724 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Csnk1a1Q8BK63 337 aaKnown RBP16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Tssk5Q8C1R0 372 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Nfam1Q8R4V1 264 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Olfr1279Q8VF38 313 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Olfr1451Q8VFX5 310 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Ppp1r1aQ9ERT9 171 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gal3st1Q9JHE4 423 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Angptl4Q9Z1P8 410 aa16.42■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gm8024L7N2E0 100 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Sh2b3O09039 548 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Cxcl10P17515 98 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 GrprP21729 384 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Ewsr1Q61545 655 aaKnown RBP16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Il17fQ7TNI7 161 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Cbln2Q8BGU2 224 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Vmn1r211Q8R266 298 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Vmn1r235Q8R297 328 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 MynnQ99MD8 610 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Teddm3Q9CQH1 294 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Rep15Q9D7T1 230 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Dchs2A0A0A6YW72 3346 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gm38303A0A0A6YWW8 100 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gm43517E9PYS1 339 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Adh1P00329 375 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 LumP51885 338 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Cuzd1P70412 606 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 VegfdP97946 358 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Tex52Q3TTI8 308 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 SetmarQ80UJ9 309 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Tm2d3Q8BJ83 261 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Dmrta1Q8CFG4 490 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Nectin4Q8R007 508 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Tmem150bQ8R218 238 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Olfr279Q8VFD8 310 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Olfr1280Q8VGG8 305 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Mcts1Q9DB27 181 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 RangrfQ9JIB0 185 aa16.41■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 71.8 ms