RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 GSTT2P0CG29 244 aa14.55□□□□□ -0.08
PHGDH-234ENST00000642041 PGA5P0DJD9 388 aa14.55□□□□□ -0.08
PHGDH-234ENST00000642041 ANXA3P12429 323 aa14.55□□□□□ -0.08
PHGDH-234ENST00000642041 PAX1P15863 534 aa14.55□□□□□ -0.08
PHGDH-234ENST00000642041 ERP29P30040 261 aaKnown RBP14.55□□□□□ -0.08
PHGDH-234ENST00000642041 CALCRP30988 508 aa14.55□□□□□ -0.08
PHGDH-234ENST00000642041 ZNF83P51522 516 aa14.55□□□□□ -0.08
PHGDH-234ENST00000642041 MPPED2Q15777 294 aa14.55□□□□□ -0.08
PHGDH-234ENST00000642041 NKAPLQ5M9Q1 402 aa14.55□□□□□ -0.08
PHGDH-234ENST00000642041 ZNF626Q68DY1 528 aa14.55□□□□□ -0.08
PHGDH-234ENST00000642041 OVCH2Q7RTZ1 564 aa14.55□□□□□ -0.08
PHGDH-234ENST00000642041 POC1AQ8NBT0 407 aa14.55□□□□□ -0.08
PHGDH-234ENST00000642041 BHLHE23Q8NDY6 225 aa14.55□□□□□ -0.08
PHGDH-234ENST00000642041 LILRB1Q8NHL6 650 aaPredicted RBP14.55□□□□□ -0.08
PHGDH-234ENST00000642041 PPP1R35Q8TAP8 253 aa14.55□□□□□ -0.08
PHGDH-234ENST00000642041 ZFAND1Q8TCF1 268 aa14.55□□□□□ -0.08
PHGDH-234ENST00000642041 NKX3-1Q99801 234 aaPredicted RBP14.55□□□□□ -0.08
PHGDH-234ENST00000642041 C19orf24Q9BVV8 132 aa14.55□□□□□ -0.08
PHGDH-234ENST00000642041 UBTD1Q9HAC8 227 aa14.55□□□□□ -0.08
PHGDH-234ENST00000642041 MTCH1Q9NZJ7 389 aa14.55□□□□□ -0.08
PHGDH-234ENST00000642041 ANXA10Q9UJ72 324 aa14.55□□□□□ -0.08
PHGDH-234ENST00000642041 MEGF8Q7Z7M0 2845 aa14.55□□□□□ -0.08
PHGDH-234ENST00000642041 PLATP00750 562 aa14.54□□□□□ -0.08
PHGDH-234ENST00000642041 FAM157CP0CG43 387 aa14.54□□□□□ -0.08
PHGDH-234ENST00000642041 BCL3P20749 454 aa14.54□□□□□ -0.08
PHGDH-234ENST00000642041 HRH1P35367 487 aa14.54□□□□□ -0.08
PHGDH-234ENST00000642041 GLP1RP43220 463 aa14.54□□□□□ -0.08
PHGDH-234ENST00000642041 EIF2B2P49770 351 aaKnown RBP14.54□□□□□ -0.08
PHGDH-234ENST00000642041 ZNF146Q15072 292 aa14.54□□□□□ -0.08
PHGDH-234ENST00000642041 ZFP69Q49AA0 526 aa14.54□□□□□ -0.08
PHGDH-234ENST00000642041 SPATA46Q5T0L3 261 aa14.54□□□□□ -0.08
PHGDH-234ENST00000642041 ATAD3CQ5T2N8 411 aa14.54□□□□□ -0.08
PHGDH-234ENST00000642041 RNF144BQ7Z419 303 aa14.54□□□□□ -0.08
PHGDH-234ENST00000642041 SCCPDHQ8NBX0 429 aa14.54□□□□□ -0.08
PHGDH-234ENST00000642041 SLAMF9Q96A28 289 aa14.54□□□□□ -0.08
PHGDH-234ENST00000642041 HYLS1Q96M11 299 aa14.54□□□□□ -0.08
PHGDH-234ENST00000642041 VRK1Q99986 396 aaPredicted RBP14.54□□□□□ -0.08
PHGDH-234ENST00000642041 ST6GALNAC5Q9BVH7 336 aa14.54□□□□□ -0.08
PHGDH-234ENST00000642041 C1QTNF6Q9BXI9 259 aa14.54□□□□□ -0.08
PHGDH-234ENST00000642041 OR51B6Q9H340 312 aa14.54□□□□□ -0.08
PHGDH-234ENST00000642041 YAE1D1Q9NRH1 226 aa14.54□□□□□ -0.08
PHGDH-234ENST00000642041 MEIS3P1A6NDR6 274 aa14.53□□□□□ -0.08
PHGDH-234ENST00000642041 DEGS1O15121 323 aa14.53□□□□□ -0.08
PHGDH-234ENST00000642041 CD5LO43866 347 aa14.53□□□□□ -0.08
PHGDH-234ENST00000642041 PRKACAP17612 351 aa14.53□□□□□ -0.08
PHGDH-234ENST00000642041 C4BPBP20851 252 aa14.53□□□□□ -0.08
PHGDH-234ENST00000642041 FPR2P25090 351 aa14.53□□□□□ -0.08
PHGDH-234ENST00000642041 FABP6P51161 128 aa14.53□□□□□ -0.08
PHGDH-234ENST00000642041 ERVK11-1P61568 191 aa14.53□□□□□ -0.08
PHGDH-234ENST00000642041 SCGB2B2Q4G0G5 96 aa14.53□□□□□ -0.08
PHGDH-234ENST00000642041 SIGIRRQ6IA17 410 aa14.53□□□□□ -0.08
PHGDH-234ENST00000642041 DHRS11Q6UWP2 260 aa14.53□□□□□ -0.08
PHGDH-234ENST00000642041 C6orf201Q7Z4U5 140 aa14.53□□□□□ -0.08
PHGDH-234ENST00000642041 MYPOPQ86VE0 399 aaPredicted RBP14.53□□□□□ -0.08
PHGDH-234ENST00000642041 TMEM185AQ8NFB2 350 aa14.53□□□□□ -0.08
PHGDH-234ENST00000642041 ZNF431Q8TF32 576 aaPredicted RBP14.53□□□□□ -0.08
PHGDH-234ENST00000642041 NRIP2Q9BQI9 281 aa14.53□□□□□ -0.08
PHGDH-234ENST00000642041 FAAP24Q9BTP7 215 aa14.53□□□□□ -0.08
PHGDH-234ENST00000642041 TINAGL1Q9GZM7 467 aaPredicted RBP14.53□□□□□ -0.08
PHGDH-234ENST00000642041 ZNF701Q9NV72 531 aaPredicted RBP14.53□□□□□ -0.08
PHGDH-234ENST00000642041 HEATR1Q9H583 2144 aaKnown RBP14.53□□□□□ -0.08
PHGDH-234ENST00000642041 A0A0B4J2A0 478 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 RGS11O94810 467 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 NXPH2O95156 264 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 KNG1P01042 644 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 ADH4P08319 380 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 SULT1A3P0DMM9 295 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 SULT1A4P0DMN0 295 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 ZNF154Q13106 437 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 CBX3Q13185 183 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 IKZF1Q13422 519 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 MICBQ29980 383 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 SMIM21Q3B7S5 101 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 C4orf46Q504U0 113 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 TMEM128Q5BJH2 165 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 LIN54Q6MZP7 749 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 SLC36A1Q7Z2H8 476 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 PEG10Q86TG7 708 aaKnown RBP14.52□□□□□ -0.09
PHGDH-234ENST00000642041 SLC25A42Q86VD7 318 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 MAPK1IP1LQ8NDC0 245 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 SLC6A7Q99884 636 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 SYT3Q9BQG1 590 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 FN3KRPQ9HA64 309 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 RAB9BQ9NP90 201 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 DECR2Q9NUI1 292 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 SHPKQ9UHJ6 478 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 AK3Q9UIJ7 227 aa14.52□□□□□ -0.09
PHGDH-234ENST00000642041 RAI1Q7Z5J4 1906 aaPredicted RBP14.51□□□□□ -0.09
PHGDH-234ENST00000642041 RNF223E7ERA6 249 aa14.51□□□□□ -0.09
PHGDH-234ENST00000642041 SIAH2O43255 324 aa14.51□□□□□ -0.09
PHGDH-234ENST00000642041 C1QBP02746 253 aa14.51□□□□□ -0.09
PHGDH-234ENST00000642041 FCGR3AP08637 254 aa14.51□□□□□ -0.09
PHGDH-234ENST00000642041 LMO1P25800 156 aa14.51□□□□□ -0.09
PHGDH-234ENST00000642041 GATA4P43694 442 aa14.51□□□□□ -0.09
PHGDH-234ENST00000642041 NPBWR2P48146 333 aa14.51□□□□□ -0.09
PHGDH-234ENST00000642041 UCP3P55916 312 aa14.51□□□□□ -0.09
PHGDH-234ENST00000642041 PIGYQ3MUY2 71 aa14.51□□□□□ -0.09
PHGDH-234ENST00000642041 TMEM255AQ5JRV8 349 aa14.51□□□□□ -0.09
PHGDH-234ENST00000642041 TRAT1Q6PIZ9 186 aa14.51□□□□□ -0.09
PHGDH-234ENST00000642041 GVQW1Q8N7I0 195 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms