RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 LSM2Q9Y333 95 aaKnown RBP12.19□□□□□ -0.46
PHGDH-231ENST00000641939 PKD1L1Q8TDX9 2849 aa12.19□□□□□ -0.46
PHGDH-231ENST00000641939 IGHV2-26A0A0B4J1V2 119 aa12.18□□□□□ -0.46
PHGDH-231ENST00000641939 ZNF780AO75290 641 aaPredicted RBP12.18□□□□□ -0.46
PHGDH-231ENST00000641939 MMP23AO75900 390 aa12.18□□□□□ -0.46
PHGDH-231ENST00000641939 MAS1P04201 325 aa12.18□□□□□ -0.46
PHGDH-231ENST00000641939 SERPINA2P20848 420 aa12.18□□□□□ -0.46
PHGDH-231ENST00000641939 MAPK3P27361 379 aaPredicted RBP12.18□□□□□ -0.46
PHGDH-231ENST00000641939 RBM11P57052 281 aaKnown RBP12.18□□□□□ -0.46
PHGDH-231ENST00000641939 IRF3Q14653 427 aa12.18□□□□□ -0.46
PHGDH-231ENST00000641939 SPHARQ15513 63 aa12.18□□□□□ -0.46
PHGDH-231ENST00000641939 MED22Q15528 200 aa12.18□□□□□ -0.46
PHGDH-231ENST00000641939 NHLRC3Q5JS37 347 aa12.18□□□□□ -0.46
PHGDH-231ENST00000641939 PRAMEF5Q5TYX0 476 aa12.18□□□□□ -0.46
PHGDH-231ENST00000641939 OR52W1Q6IF63 320 aa12.18□□□□□ -0.46
PHGDH-231ENST00000641939 HEPN1Q6WQI6 88 aa12.18□□□□□ -0.46
PHGDH-231ENST00000641939 CDH26Q8IXH8 852 aa12.18□□□□□ -0.46
PHGDH-231ENST00000641939 JAGN1Q8N5M9 183 aa12.18□□□□□ -0.46
PHGDH-231ENST00000641939 MS4A15Q8N5U1 240 aa12.18□□□□□ -0.46
PHGDH-231ENST00000641939 MALSU1Q96EH3 234 aa12.18□□□□□ -0.46
PHGDH-231ENST00000641939 PPIL3Q9H2H8 161 aaKnown RBP12.18□□□□□ -0.46
PHGDH-231ENST00000641939 DUSP21Q9H596 190 aa12.18□□□□□ -0.46
PHGDH-231ENST00000641939 OR6C3Q9NZP0 311 aa12.18□□□□□ -0.46
PHGDH-231ENST00000641939 WNK1Q9H4A3 2382 aa12.17□□□□□ -0.46
PHGDH-231ENST00000641939 VGLL3A8MV65 326 aa12.17□□□□□ -0.46
PHGDH-231ENST00000641939 PIN1P1O15428 100 aa12.17□□□□□ -0.46
PHGDH-231ENST00000641939 RGS10O43665 173 aa12.17□□□□□ -0.46
PHGDH-231ENST00000641939 CDK2P24941 298 aa12.17□□□□□ -0.46
PHGDH-231ENST00000641939 KCNJ3P48549 501 aa12.17□□□□□ -0.46
PHGDH-231ENST00000641939 GPR176Q14439 515 aa12.17□□□□□ -0.46
PHGDH-231ENST00000641939 SSX2Q16385 188 aa12.17□□□□□ -0.46
PHGDH-231ENST00000641939 LY6EQ16553 131 aa12.17□□□□□ -0.46
PHGDH-231ENST00000641939 SLC22A6Q4U2R8 563 aa12.17□□□□□ -0.46
PHGDH-231ENST00000641939 LDLRAD2Q5SZI1 272 aa12.17□□□□□ -0.46
PHGDH-231ENST00000641939 MINOS1Q5TGZ0 78 aa12.17□□□□□ -0.46
PHGDH-231ENST00000641939 Q6ZSV7 163 aa12.17□□□□□ -0.46
PHGDH-231ENST00000641939 LINC00596Q86U02 117 aa12.17□□□□□ -0.46
PHGDH-231ENST00000641939 DYNAPQ8N1N2 210 aa12.17□□□□□ -0.46
PHGDH-231ENST00000641939 LINC01006Q8NI28 216 aa12.17□□□□□ -0.46
PHGDH-231ENST00000641939 MUL1Q969V5 352 aa12.17□□□□□ -0.46
PHGDH-231ENST00000641939 BARHL1Q9BZE3 327 aa12.17□□□□□ -0.46
PHGDH-231ENST00000641939 NCOR1P1Q9H4R4 102 aa12.17□□□□□ -0.46
PHGDH-231ENST00000641939 IFT22Q9H7X7 185 aa12.17□□□□□ -0.46
PHGDH-231ENST00000641939 KIF25Q9UIL4 384 aa12.17□□□□□ -0.46
PHGDH-231ENST00000641939 MRPS28Q9Y2Q9 187 aaKnown RBP12.17□□□□□ -0.46
PHGDH-231ENST00000641939 MINOS1-NBL1R4GNA1 71 aa12.17□□□□□ -0.46
PHGDH-231ENST00000641939 MEIKINA0A087WXM9 373 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 ZNF729A6NN14 1252 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-231ENST00000641939 GEMIN2O14893 280 aaKnown RBP12.16□□□□□ -0.46
PHGDH-231ENST00000641939 TSPAN9O75954 239 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 OR7C1O76099 320 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-231ENST00000641939 GTF2F2P13984 249 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 CRHBPP24387 322 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 PAX5Q02548 391 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 GPR50Q13585 617 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 FAM189A2Q15884 450 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 ACSM3Q53FZ2 586 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 PLA1AQ53H76 456 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 UNQ9370/PRO34162Q6UXP9 181 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 BAIAP2L2Q6UXY1 529 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 RTN4RL2Q86UN3 420 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 ABHD12Q8N2K0 398 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 NKAIN3Q8N8D7 197 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 ZNF565Q8N9K5 539 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 SUMF2Q8NBJ7 301 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 OR4D6Q8NGJ1 314 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 PIFOQ8TCI5 191 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 WFDC12Q8WWY7 111 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 TMED9Q9BVK6 235 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 DPCDQ9BVM2 203 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-231ENST00000641939 C16orf95Q9H693 158 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 RAB18Q9NP72 206 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 RNF114Q9Y508 228 aa12.16□□□□□ -0.46
PHGDH-231ENST00000641939 KBTBD11-OT1A0A1B0GTJ5 212 aa12.15□□□□□ -0.46
PHGDH-231ENST00000641939 A0A1W2PP11 408 aa12.15□□□□□ -0.46
PHGDH-231ENST00000641939 MEGF11A6BM72 1044 aa12.15□□□□□ -0.46
PHGDH-231ENST00000641939 ATP6V1G2O95670 118 aa12.15□□□□□ -0.46
PHGDH-231ENST00000641939 GLP1RP43220 463 aa12.15□□□□□ -0.46
PHGDH-231ENST00000641939 INSL4Q14641 139 aa12.15□□□□□ -0.46
PHGDH-231ENST00000641939 C17orf58Q2M2W7 97 aa12.15□□□□□ -0.46
PHGDH-231ENST00000641939 MPV17LQ2QL34 196 aa12.15□□□□□ -0.46
PHGDH-231ENST00000641939 RSBN1Q5VWQ0 802 aaPredicted RBP12.15□□□□□ -0.46
PHGDH-231ENST00000641939 AWAT2Q6E213 333 aa12.15□□□□□ -0.46
PHGDH-231ENST00000641939 GLIPR1L1Q6UWM5 242 aa12.15□□□□□ -0.46
PHGDH-231ENST00000641939 LIAT1Q6ZQX7 453 aa12.15□□□□□ -0.46
PHGDH-231ENST00000641939 OR4P4Q8NGL7 312 aa12.15□□□□□ -0.46
PHGDH-231ENST00000641939 OR13A1Q8NGR1 328 aa12.15□□□□□ -0.46
PHGDH-231ENST00000641939 NDNFQ8TB73 568 aa12.15□□□□□ -0.46
PHGDH-231ENST00000641939 PLPPR1Q8TBJ4 325 aa12.15□□□□□ -0.46
PHGDH-231ENST00000641939 MRPS24Q96EL2 167 aaKnown RBP12.15□□□□□ -0.46
PHGDH-231ENST00000641939 CNBD2Q96M20 576 aa12.15□□□□□ -0.46
PHGDH-231ENST00000641939 UQCC2Q9BRT2 126 aa12.15□□□□□ -0.46
PHGDH-231ENST00000641939 ABCB10Q9NRK6 738 aa12.15□□□□□ -0.46
PHGDH-231ENST00000641939 ZNF581Q9P0T4 197 aa12.15□□□□□ -0.46
PHGDH-231ENST00000641939 CGB3P0DN86 165 aa12.14□□□□□ -0.47
PHGDH-231ENST00000641939 CGB7P0DN87 165 aa12.14□□□□□ -0.47
PHGDH-231ENST00000641939 HTR1DP28221 377 aa12.14□□□□□ -0.47
PHGDH-231ENST00000641939 CD34P28906 385 aa12.14□□□□□ -0.47
PHGDH-231ENST00000641939 GDNFP39905 211 aa12.14□□□□□ -0.47
PHGDH-231ENST00000641939 DYNLT3P51808 116 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms