RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 TMEM100Q9NV29 134 aa14.45□□□□□ -0.1
PHGDH-229ENST00000641891 C3orf85A0A1B0GTC6 90 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 TRDCB7Z8K6 153 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 PRSS44E7EML9 344 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 TK1P04183 234 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 FAM157CP0CG43 387 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 KCNJ3P48549 501 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 GUSBP1Q15486 140 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 GABRA6Q16445 453 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 SPIN3Q5JUX0 258 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 FBXW12Q6X9E4 464 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 TBC1D26Q86UD7 250 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 PKIBQ9C010 78 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 FBXL17Q9UF56 701 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 AMDHD2Q9Y303 409 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 EP300Q09472 2414 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-229ENST00000641891 J3QT63 122 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 AGFG2O95081 481 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 TGFBR3Q03167 851 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 BTN1A1Q13410 526 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 SRSF7Q16629 238 aaKnown RBP eCLIP14.44□□□□□ -0.1
PHGDH-229ENST00000641891 TMEM268Q5VZI3 342 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 GAPTQ8N292 157 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 SLC25A40Q8TBP6 338 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 PLK3Q9H4B4 646 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 DLL3Q9NYJ7 618 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 ATP23Q9Y6H3 246 aa14.44□□□□□ -0.1
PHGDH-229ENST00000641891 PTPRBP23467 1997 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 ZNF318Q5VUA4 2279 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 TRAV17A0A0B4J275 112 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 HSD17B6O14756 317 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 SELEP16581 610 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 KIR2DL2P43627 348 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-229ENST00000641891 ARHGDIBP52566 201 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 AKR1C2P52895 323 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 AKR1C1Q04828 323 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 ATRAIDQ6UW56 229 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 Q6ZT83 130 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 RNF141Q8WVD5 230 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 ERGIC1Q969X5 290 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 MARC2Q969Z3 335 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 USB1Q9BQ65 265 aaKnown RBP14.43□□□□□ -0.1
PHGDH-229ENST00000641891 GLRX2Q9NS18 164 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 SPEF1Q9Y4P9 236 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 TRAV39A0A0B4J263 110 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 TPD52L2O43399 206 aaKnown RBP14.43□□□□□ -0.1
PHGDH-229ENST00000641891 APOC3P02656 99 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 ZNF44P15621 663 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 TMEM33P57088 247 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 FOXF2Q12947 444 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 LINC00596Q86U02 117 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 LDLRAD3Q86YD5 345 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 ZNF565Q8N9K5 539 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 SCCPDHQ8NBX0 429 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 OR1J1Q8NGS3 322 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 NARS2Q96I59 477 aaKnown RBP14.43□□□□□ -0.1
PHGDH-229ENST00000641891 RTL8AQ9BWD3 113 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 TAF9BQ9HBM6 251 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 ZDHHC8Q9ULC8 765 aa14.43□□□□□ -0.1
PHGDH-229ENST00000641891 KIR2DS1A0A191URI9 304 aa14.42□□□□□ -0.1
PHGDH-229ENST00000641891 ZNF705EA8MWA4 302 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-229ENST00000641891 H0YL77 283 aa14.42□□□□□ -0.1
PHGDH-229ENST00000641891 AQP7O14520 342 aa14.42□□□□□ -0.1
PHGDH-229ENST00000641891 TUSC2O75896 110 aa14.42□□□□□ -0.1
PHGDH-229ENST00000641891 SLC34A2O95436 690 aa14.42□□□□□ -0.1
PHGDH-229ENST00000641891 MPV17P39210 176 aa14.42□□□□□ -0.1
PHGDH-229ENST00000641891 KIR2DS4P43632 304 aa14.42□□□□□ -0.1
PHGDH-229ENST00000641891 MRPL49Q13405 166 aaKnown RBP14.42□□□□□ -0.1
PHGDH-229ENST00000641891 IL13RA2Q14627 380 aa14.42□□□□□ -0.1
PHGDH-229ENST00000641891 KIR2DS1Q14954 304 aa14.42□□□□□ -0.1
PHGDH-229ENST00000641891 MST1LQ2TV78 715 aa14.42□□□□□ -0.1
PHGDH-229ENST00000641891 Q6P435 159 aa14.42□□□□□ -0.1
PHGDH-229ENST00000641891 C17orf50Q8WW18 174 aa14.42□□□□□ -0.1
PHGDH-229ENST00000641891 ADAT1Q9BUB4 502 aaKnown RBP14.42□□□□□ -0.1
PHGDH-229ENST00000641891 PIGMQ9H3S5 423 aa14.42□□□□□ -0.1
PHGDH-229ENST00000641891 SPACA1Q9HBV2 294 aa14.42□□□□□ -0.1
PHGDH-229ENST00000641891 CCL28Q9NRJ3 127 aa14.42□□□□□ -0.1
PHGDH-229ENST00000641891 FBXO9Q9UK97 447 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-229ENST00000641891 DEGS1O15121 323 aa14.41□□□□□ -0.1
PHGDH-229ENST00000641891 SRSF3P84103 164 aaKnown RBP14.41□□□□□ -0.1
PHGDH-229ENST00000641891 PSG7Q13046 419 aa14.41□□□□□ -0.1
PHGDH-229ENST00000641891 PCSK4Q6UW60 755 aa14.41□□□□□ -0.1
PHGDH-229ENST00000641891 TMEM222Q9H0R3 208 aa14.41□□□□□ -0.1
PHGDH-229ENST00000641891 PLA2G2EQ9NZK7 142 aa14.41□□□□□ -0.1
PHGDH-229ENST00000641891 NKX2-6A6NCS4 301 aa14.41□□□□□ -0.1
PHGDH-229ENST00000641891 SIRPB1O00241 398 aa14.41□□□□□ -0.1
PHGDH-229ENST00000641891 GPR31O00270 319 aa14.41□□□□□ -0.1
PHGDH-229ENST00000641891 TAAR5O14804 337 aa14.41□□□□□ -0.1
PHGDH-229ENST00000641891 TNFSF12O43508 249 aa14.41□□□□□ -0.1
PHGDH-229ENST00000641891 FBXO24O75426 580 aa14.41□□□□□ -0.1
PHGDH-229ENST00000641891 UCP2P55851 309 aa14.41□□□□□ -0.1
PHGDH-229ENST00000641891 RCL1Q9Y2P8 373 aaKnown RBP14.41□□□□□ -0.1
PHGDH-229ENST00000641891 UBE2J1Q9Y385 318 aaPredicted RBP14.41□□□□□ -0.1
PHGDH-229ENST00000641891 PRRC2CQ9Y520 2896 aaKnown RBP14.41□□□□□ -0.1
PHGDH-229ENST00000641891 LRP5LA4QPB2 252 aa14.4□□□□□ -0.1
PHGDH-229ENST00000641891 E5RGE8 158 aa14.4□□□□□ -0.1
PHGDH-229ENST00000641891 CDIPTO14735 213 aa14.4□□□□□ -0.1
PHGDH-229ENST00000641891 HOXA4Q00056 320 aaPredicted RBP14.4□□□□□ -0.1
PHGDH-229ENST00000641891 ZNF154Q13106 437 aa14.4□□□□□ -0.1
PHGDH-229ENST00000641891 FAM185AQ8N0U4 392 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms