RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 TRDCB7Z8K6 153 aa12.54□□□□□ -0.4
SCARB2-208ENST00000638372 EFEMP2O95967 443 aa12.54□□□□□ -0.4
SCARB2-208ENST00000638372 ADH4P08319 380 aa12.54□□□□□ -0.4
SCARB2-208ENST00000638372 ZNF574Q6ZN55 896 aaPredicted RBP12.54□□□□□ -0.4
SCARB2-208ENST00000638372 SKA3Q8IX90 412 aa12.54□□□□□ -0.4
SCARB2-208ENST00000638372 POM121L2Q96KW2 1035 aa12.54□□□□□ -0.4
SCARB2-208ENST00000638372 DHRS9Q9BPW9 319 aa12.54□□□□□ -0.4
SCARB2-208ENST00000638372 CXXC4Q9H2H0 198 aa12.54□□□□□ -0.4
SCARB2-208ENST00000638372 VSIG4Q9Y279 399 aa12.54□□□□□ -0.4
SCARB2-208ENST00000638372 V9GYS6 101 aa12.54□□□□□ -0.4
SCARB2-208ENST00000638372 PATJQ8NI35 1801 aa12.54□□□□□ -0.4
SCARB2-208ENST00000638372 J3QT63 122 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 GDF9O60383 454 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 ZNF90Q03938 601 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 FOXO1Q12778 655 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 IL17BQ9UHF5 180 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 RALGAPA2Q2PPJ7 1873 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 WDR90Q96KV7 1748 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 KCNAB3O43448 404 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 CLN5O75503 358 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 CD1AP06126 327 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 KCNJ3P48549 501 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 NCR3LG1Q68D85 454 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 LIAT1Q6ZQX7 453 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 APCDD1LQ8NCL9 501 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 MMP24Q9Y5R2 645 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 TRAF3IP2O43734 574 aaPredicted RBP12.53□□□□□ -0.4
SCARB2-208ENST00000638372 CLEC3BP05452 202 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 VSIG10L2P0DP72 767 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 VDAC1P21796 283 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 OR5A2Q8NGI9 324 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 OR13D1Q8NGV5 346 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 CA5BP1Q8WTZ4 195 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 NTNG2Q96CW9 530 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 GLRX2Q9NS18 164 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 NEUROG3Q9Y4Z2 214 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 NYNRINQ9P2P1 1898 aaKnown RBP12.53□□□□□ -0.4
SCARB2-208ENST00000638372 TMPRSS2O15393 492 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 IFI6P09912 130 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 HOXD11P31277 338 aaPredicted RBP12.53□□□□□ -0.4
SCARB2-208ENST00000638372 MDH2P40926 338 aaKnown RBP12.53□□□□□ -0.4
SCARB2-208ENST00000638372 LRFN3Q9BTN0 628 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 LPAR5Q9H1C0 372 aa12.53□□□□□ -0.4
SCARB2-208ENST00000638372 ELF5Q9UKW6 265 aaPredicted RBP12.53□□□□□ -0.4
SCARB2-208ENST00000638372 CHST1O43916 411 aa12.52□□□□□ -0.4
SCARB2-208ENST00000638372 S100A7P31151 101 aa12.52□□□□□ -0.4
SCARB2-208ENST00000638372 IL13RA2Q14627 380 aa12.52□□□□□ -0.4
SCARB2-208ENST00000638372 DCAF12L2Q5VW00 463 aa12.52□□□□□ -0.4
SCARB2-208ENST00000638372 CDCP2Q5VXM1 449 aa12.52□□□□□ -0.4
SCARB2-208ENST00000638372 MOGAT3Q86VF5 341 aa12.52□□□□□ -0.4
SCARB2-208ENST00000638372 SAT2Q96F10 170 aaPredicted RBP12.52□□□□□ -0.4
SCARB2-208ENST00000638372 NOTCH3Q9UM47 2321 aa12.52□□□□□ -0.4
SCARB2-208ENST00000638372 RLFQ13129 1914 aa12.52□□□□□ -0.41
SCARB2-208ENST00000638372 ADAM11O75078 769 aa12.52□□□□□ -0.41
SCARB2-208ENST00000638372 HRASP01112 189 aa12.52□□□□□ -0.41
SCARB2-208ENST00000638372 PRR27Q6MZM9 219 aa12.52□□□□□ -0.41
SCARB2-208ENST00000638372 BHLHA15Q7RTS1 189 aaPredicted RBP12.52□□□□□ -0.41
SCARB2-208ENST00000638372 ZNF251Q9BRH9 671 aa12.52□□□□□ -0.41
SCARB2-208ENST00000638372 ZNF331Q9NQX6 463 aaPredicted RBP12.52□□□□□ -0.41
SCARB2-208ENST00000638372 KLF4O43474 513 aa12.52□□□□□ -0.41
SCARB2-208ENST00000638372 FREM3P0C091 2139 aa12.52□□□□□ -0.41
SCARB2-208ENST00000638372 ZP3P21754 424 aa12.52□□□□□ -0.41
SCARB2-208ENST00000638372 SLC25A47Q6Q0C1 308 aa12.52□□□□□ -0.41
SCARB2-208ENST00000638372 ETV3LQ6ZN32 361 aa12.52□□□□□ -0.41
SCARB2-208ENST00000638372 MMP26Q9NRE1 261 aa12.52□□□□□ -0.41
SCARB2-208ENST00000638372 HAND1O96004 215 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 PCOLCEQ15113 449 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 MTCL1Q9Y4B5 1905 aaKnown RBP12.51□□□□□ -0.41
SCARB2-208ENST00000638372 RAMP1O60894 148 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 ZNF528Q3MIS6 628 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 FFAR4Q5NUL3 377 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 ATP1A1-AS1Q5TC04 95 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 STPG1Q5TH74 334 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 ZNF519Q8TB69 540 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 ZNRF4Q8WWF5 429 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 IL36GQ9NZH8 169 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 ZNF107Q9UII5 783 aaPredicted RBP12.51□□□□□ -0.41
SCARB2-208ENST00000638372 ATRXP46100 2492 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 A0A0U1RQV5 110 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 CDRT15L2A8MXV6 281 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 H0Y8G0 127 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 K7EQM0 130 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 FSTP19883 344 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 SCGB2A2Q13296 93 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 HFEQ30201 348 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 TPRX1Q8N7U7 411 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 PHYHIPLQ96FC7 376 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 GPR137Q96N19 417 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 GINS3Q9BRX5 216 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 OR51I2Q9H344 312 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 SLC25A22Q9H936 323 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 DVL1O14640 695 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 FABP1P07148 127 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 COX6A1P12074 109 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 COX7A1P24310 79 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 PMELP40967 661 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 DVL1P1P54792 670 aaPredicted RBP12.51□□□□□ -0.41
SCARB2-208ENST00000638372 MPV17LQ2QL34 196 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 HOGA1Q86XE5 327 aa12.51□□□□□ -0.41
SCARB2-208ENST00000638372 DOCK7Q96N67 2140 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms