RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 SLC25A40Q8TBP6 338 aa18.32■□□□□ 0.52
CLN6-224ENST00000638076 PRRX2Q99811 253 aa18.32■□□□□ 0.52
CLN6-224ENST00000638076 RIMS4Q9H426 269 aaPredicted RBP18.32■□□□□ 0.52
CLN6-224ENST00000638076 PTPRBP23467 1997 aa18.32■□□□□ 0.52
CLN6-224ENST00000638076 IGKV1-6A0A0C4DH72 117 aa18.32■□□□□ 0.52
CLN6-224ENST00000638076 C3orf85A0A1B0GTC6 90 aa18.32■□□□□ 0.52
CLN6-224ENST00000638076 H7C1Q1 480 aa18.32■□□□□ 0.52
CLN6-224ENST00000638076 FGF16O43320 207 aa18.32■□□□□ 0.52
CLN6-224ENST00000638076 SLC34A2O95436 690 aa18.32■□□□□ 0.52
CLN6-224ENST00000638076 KCNJ3P48549 501 aa18.32■□□□□ 0.52
CLN6-224ENST00000638076 NOVA1P51513 510 aaKnown RBP18.32■□□□□ 0.52
CLN6-224ENST00000638076 TCF15Q12870 199 aa18.32■□□□□ 0.52
CLN6-224ENST00000638076 SPIN3Q5JUX0 258 aa18.32■□□□□ 0.52
CLN6-224ENST00000638076 STPG2Q8N412 459 aa18.32■□□□□ 0.52
CLN6-224ENST00000638076 OR1J1Q8NGS3 322 aa18.32■□□□□ 0.52
CLN6-224ENST00000638076 GTF3AQ92664 365 aaKnown RBP18.32■□□□□ 0.52
CLN6-224ENST00000638076 COQ3Q9NZJ6 369 aa18.32■□□□□ 0.52
CLN6-224ENST00000638076 PCDHB10Q9UN67 800 aa18.32■□□□□ 0.52
CLN6-224ENST00000638076 ARID1AO14497 2285 aa18.31■□□□□ 0.52
CLN6-224ENST00000638076 ESPL1Q14674 2120 aa18.31■□□□□ 0.52
CLN6-224ENST00000638076 ZNF891A8MT65 544 aaPredicted RBP18.31■□□□□ 0.52
CLN6-224ENST00000638076 MBPP02686 304 aaPredicted RBP18.31■□□□□ 0.52
CLN6-224ENST00000638076 UCP2P55851 309 aa18.31■□□□□ 0.52
CLN6-224ENST00000638076 ALKBH6Q3KRA9 238 aa18.31■□□□□ 0.52
CLN6-224ENST00000638076 MEX3BQ6ZN04 569 aaKnown RBP18.31■□□□□ 0.52
CLN6-224ENST00000638076 FAM185AQ8N0U4 392 aa18.31■□□□□ 0.52
CLN6-224ENST00000638076 OR1S2Q8NGQ3 325 aa18.31■□□□□ 0.52
CLN6-224ENST00000638076 WNT2BQ93097 391 aa18.31■□□□□ 0.52
CLN6-224ENST00000638076 ASF1BQ9NVP2 202 aa18.31■□□□□ 0.52
CLN6-224ENST00000638076 DLL3Q9NYJ7 618 aa18.31■□□□□ 0.52
CLN6-224ENST00000638076 FBXO9Q9UK97 447 aaPredicted RBP18.31■□□□□ 0.52
CLN6-224ENST00000638076 CNOT4O95628 575 aaKnown RBP18.31■□□□□ 0.52
CLN6-224ENST00000638076 ZNF44P15621 663 aa18.31■□□□□ 0.52
CLN6-224ENST00000638076 M6PRP20645 277 aa18.31■□□□□ 0.52
CLN6-224ENST00000638076 FAM76BQ5HYJ3 339 aa18.31■□□□□ 0.52
CLN6-224ENST00000638076 ZNF818PQ6ZRF7 136 aa18.31■□□□□ 0.52
CLN6-224ENST00000638076 ZNF565Q8N9K5 539 aa18.31■□□□□ 0.52
CLN6-224ENST00000638076 BOLLQ8N9W6 283 aaKnown RBP18.31■□□□□ 0.52
CLN6-224ENST00000638076 SPERTQ8NA61 448 aa18.31■□□□□ 0.52
CLN6-224ENST00000638076 SCCPDHQ8NBX0 429 aa18.31■□□□□ 0.52
CLN6-224ENST00000638076 RNF141Q8WVD5 230 aa18.31■□□□□ 0.52
CLN6-224ENST00000638076 ADAT1Q9BUB4 502 aaKnown RBP18.31■□□□□ 0.52
CLN6-224ENST00000638076 IGKV1D-13A0A0B4J2D9 117 aa18.3■□□□□ 0.52
CLN6-224ENST00000638076 LRP5LA4QPB2 252 aa18.3■□□□□ 0.52
CLN6-224ENST00000638076 TAAR5O14804 337 aa18.3■□□□□ 0.52
CLN6-224ENST00000638076 CTXN2P0C2S0 81 aa18.3■□□□□ 0.52
CLN6-224ENST00000638076 IGKV1-13P0DP09 117 aa18.3■□□□□ 0.52
CLN6-224ENST00000638076 RAC2P15153 192 aa18.3■□□□□ 0.52
CLN6-224ENST00000638076 HOXC12P31275 282 aa18.3■□□□□ 0.52
CLN6-224ENST00000638076 RPL7L1Q6DKI1 246 aaKnown RBP18.3■□□□□ 0.52
CLN6-224ENST00000638076 TBC1D26Q86UD7 250 aa18.3■□□□□ 0.52
CLN6-224ENST00000638076 LDLRAD3Q86YD5 345 aa18.3■□□□□ 0.52
CLN6-224ENST00000638076 TMEM100Q9NV29 134 aa18.3■□□□□ 0.52
CLN6-224ENST00000638076 PRR33A8MZF0 331 aa18.29■□□□□ 0.52
CLN6-224ENST00000638076 DEGS1O15121 323 aa18.29■□□□□ 0.52
CLN6-224ENST00000638076 CEACAM4O75871 244 aa18.29■□□□□ 0.52
CLN6-224ENST00000638076 TUSC2O75896 110 aa18.29■□□□□ 0.52
CLN6-224ENST00000638076 AGFG2O95081 481 aa18.29■□□□□ 0.52
CLN6-224ENST00000638076 FOXF2Q12947 444 aa18.29■□□□□ 0.52
CLN6-224ENST00000638076 SLC35G3Q8N808 338 aa18.29■□□□□ 0.52
CLN6-224ENST00000638076 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.29■□□□□ 0.52
CLN6-224ENST00000638076 OR52M1Q8NGK5 317 aa18.29■□□□□ 0.52
CLN6-224ENST00000638076 TAAR6Q96RI8 345 aa18.29■□□□□ 0.52
CLN6-224ENST00000638076 IFT22Q9H7X7 185 aa18.29■□□□□ 0.52
CLN6-224ENST00000638076 CNOT1A5YKK6 2376 aaKnown RBP18.29■□□□□ 0.52
CLN6-224ENST00000638076 COX5AP20674 150 aa18.29■□□□□ 0.52
CLN6-224ENST00000638076 PSG7Q13046 419 aa18.29■□□□□ 0.52
CLN6-224ENST00000638076 TMEM268Q5VZI3 342 aa18.29■□□□□ 0.52
CLN6-224ENST00000638076 GAPTQ8N292 157 aa18.29■□□□□ 0.52
CLN6-224ENST00000638076 TMEM222Q9H0R3 208 aa18.29■□□□□ 0.52
CLN6-224ENST00000638076 TMED3Q9Y3Q3 217 aa18.29■□□□□ 0.52
CLN6-224ENST00000638076 TRBV6-6A0A0A6YYG2 114 aa18.28■□□□□ 0.52
CLN6-224ENST00000638076 IGHV3-64DA0A0J9YX35 117 aa18.28■□□□□ 0.52
CLN6-224ENST00000638076 GPR31O00270 319 aa18.28■□□□□ 0.52
CLN6-224ENST00000638076 GLAP06280 429 aa18.28■□□□□ 0.52
CLN6-224ENST00000638076 HOXB1P14653 301 aaPredicted RBP18.28■□□□□ 0.52
CLN6-224ENST00000638076 CBR1P16152 277 aa18.28■□□□□ 0.52
CLN6-224ENST00000638076 RCC1P18754 421 aaPredicted RBP18.28■□□□□ 0.52
CLN6-224ENST00000638076 ACSF3Q4G176 576 aaPredicted RBP18.28■□□□□ 0.52
CLN6-224ENST00000638076 Q6P435 159 aa18.28■□□□□ 0.52
CLN6-224ENST00000638076 RHOFQ9HBH0 211 aa18.28■□□□□ 0.52
CLN6-224ENST00000638076 POLDIP2Q9Y2S7 368 aa18.28■□□□□ 0.52
CLN6-224ENST00000638076 IQCF6A8MYZ5 107 aa18.28■□□□□ 0.52
CLN6-224ENST00000638076 B8ZZF3 427 aa18.28■□□□□ 0.52
CLN6-224ENST00000638076 CDIPTO14735 213 aa18.28■□□□□ 0.52
CLN6-224ENST00000638076 IGKV3-15P01624 115 aa18.28■□□□□ 0.52
CLN6-224ENST00000638076 ZNF154Q13106 437 aa18.28■□□□□ 0.52
CLN6-224ENST00000638076 PCSK4Q6UW60 755 aa18.28■□□□□ 0.52
CLN6-224ENST00000638076 WDR31Q8NA23 367 aa18.28■□□□□ 0.52
CLN6-224ENST00000638076 PIGMQ9H3S5 423 aa18.28■□□□□ 0.52
CLN6-224ENST00000638076 TAF9BQ9HBM6 251 aa18.28■□□□□ 0.52
CLN6-224ENST00000638076 AMDHD2Q9Y303 409 aa18.28■□□□□ 0.52
CLN6-224ENST00000638076 E5RGE8 158 aa18.27■□□□□ 0.52
CLN6-224ENST00000638076 HSD17B6O14756 317 aa18.27■□□□□ 0.52
CLN6-224ENST00000638076 FAM157CP0CG43 387 aa18.27■□□□□ 0.52
CLN6-224ENST00000638076 MPV17P39210 176 aa18.27■□□□□ 0.52
CLN6-224ENST00000638076 RND3P61587 244 aa18.27■□□□□ 0.52
CLN6-224ENST00000638076 SMUG1Q53HV7 270 aa18.27■□□□□ 0.52
CLN6-224ENST00000638076 ZNF880Q6PDB4 577 aa18.27■□□□□ 0.52
CLN6-224ENST00000638076 Q8IYB0 196 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms