RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 SOCS1O15524 211 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 GATA3P23771 443 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 ERP29P30040 261 aaKnown RBP13.21□□□□□ -0.29
CLN6-216ENST00000636876 BLVRBP30043 206 aaPredicted RBP13.21□□□□□ -0.29
CLN6-216ENST00000636876 VEGFCP49767 419 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 P2RX3P56373 397 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 EDDM3BP56851 147 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 RPL31P62899 125 aaKnown RBP13.21□□□□□ -0.29
CLN6-216ENST00000636876 ATXN7L3Q14CW9 347 aaPredicted RBP13.21□□□□□ -0.29
CLN6-216ENST00000636876 FAM189A2Q15884 450 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 BRICD5Q6PL45 260 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 CLEC9AQ6UXN8 241 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 BPIFB2Q8N4F0 458 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 OR4M2Q8NGB6 313 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 OR4M1Q8NGD0 313 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 OR56B1Q8NGI3 324 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 DYNC2LI1Q8TCX1 351 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 COQ2Q96H96 371 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 C19orf12Q9NSK7 152 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 RHBDL2Q9NX52 303 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 NDUFA13Q9P0J0 144 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 RSL24D1Q9UHA3 163 aaKnown RBP13.21□□□□□ -0.29
CLN6-216ENST00000636876 KCNS2Q9ULS6 477 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 SPATA2Q9UM82 520 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 INSIG2Q9Y5U4 225 aa13.21□□□□□ -0.29
CLN6-216ENST00000636876 A0A1W2PQ09 198 aa13.2□□□□□ -0.3
CLN6-216ENST00000636876 FUOMA2VDF0 154 aa13.2□□□□□ -0.3
CLN6-216ENST00000636876 DPPA5A6NC42 116 aa13.2□□□□□ -0.3
CLN6-216ENST00000636876 METTL21EPA6NDL7 271 aa13.2□□□□□ -0.3
CLN6-216ENST00000636876 FOXI3A8MTJ6 420 aaPredicted RBP13.2□□□□□ -0.3
CLN6-216ENST00000636876 MCRIP1C9JLW8 97 aa13.2□□□□□ -0.3
CLN6-216ENST00000636876 LIPFP07098 398 aa13.2□□□□□ -0.3
CLN6-216ENST00000636876 PPIAL4GP0DN37 164 aa13.2□□□□□ -0.3
CLN6-216ENST00000636876 ZNF182P17025 639 aaPredicted RBP13.2□□□□□ -0.3
CLN6-216ENST00000636876 PAX5Q02548 391 aa13.2□□□□□ -0.3
CLN6-216ENST00000636876 MEF2CQ06413 473 aaPredicted RBP13.2□□□□□ -0.3
CLN6-216ENST00000636876 AESQ08117 197 aa13.2□□□□□ -0.3
CLN6-216ENST00000636876 DYNC1I2Q13409 638 aaKnown RBP13.2□□□□□ -0.3
CLN6-216ENST00000636876 RBM39Q14498 530 aaKnown RBP13.2□□□□□ -0.3
CLN6-216ENST00000636876 KRBOX4Q5JUW0 171 aa13.2□□□□□ -0.3
CLN6-216ENST00000636876 NKAPLQ5M9Q1 402 aa13.2□□□□□ -0.3
CLN6-216ENST00000636876 BTNL3Q6UXE8 466 aa13.2□□□□□ -0.3
CLN6-216ENST00000636876 FAM185AQ8N0U4 392 aa13.2□□□□□ -0.3
CLN6-216ENST00000636876 PLPPR1Q8TBJ4 325 aa13.2□□□□□ -0.3
CLN6-216ENST00000636876 NEK7Q8TDX7 302 aa13.2□□□□□ -0.3
CLN6-216ENST00000636876 ACOT12Q8WYK0 555 aa13.2□□□□□ -0.3
CLN6-216ENST00000636876 SLC25A38Q96DW6 304 aa13.2□□□□□ -0.3
CLN6-216ENST00000636876 DMRTB1Q96MA1 342 aa13.2□□□□□ -0.3
CLN6-216ENST00000636876 GSX1Q9H4S2 264 aaPredicted RBP13.2□□□□□ -0.3
CLN6-216ENST00000636876 YAE1D1Q9NRH1 226 aa13.2□□□□□ -0.3
CLN6-216ENST00000636876 LPAR3Q9UBY5 353 aa13.2□□□□□ -0.3
CLN6-216ENST00000636876 DSCAML1Q8TD84 2053 aa13.2□□□□□ -0.3
CLN6-216ENST00000636876 J3QLI3 93 aa13.19□□□□□ -0.3
CLN6-216ENST00000636876 SOX6P35712 828 aa13.19□□□□□ -0.3
CLN6-216ENST00000636876 GLIPR1P48060 266 aa13.19□□□□□ -0.3
CLN6-216ENST00000636876 TMEM50BP56557 158 aa13.19□□□□□ -0.3
CLN6-216ENST00000636876 PAX8Q06710 450 aa13.19□□□□□ -0.3
CLN6-216ENST00000636876 RSBN1Q5VWQ0 802 aaPredicted RBP13.19□□□□□ -0.3
CLN6-216ENST00000636876 TMEM200BQ69YZ2 307 aa13.19□□□□□ -0.3
CLN6-216ENST00000636876 C6orf201Q7Z4U5 140 aa13.19□□□□□ -0.3
CLN6-216ENST00000636876 TPRX1Q8N7U7 411 aa13.19□□□□□ -0.3
CLN6-216ENST00000636876 CYYR1Q96J86 154 aa13.19□□□□□ -0.3
CLN6-216ENST00000636876 SULT4A1Q9BR01 284 aa13.19□□□□□ -0.3
CLN6-216ENST00000636876 ATG5Q9H1Y0 275 aa13.19□□□□□ -0.3
CLN6-216ENST00000636876 NCOR1P1Q9H4R4 102 aa13.19□□□□□ -0.3
CLN6-216ENST00000636876 ING3Q9NXR8 418 aa13.19□□□□□ -0.3
CLN6-216ENST00000636876 CCDC59Q9P031 241 aaKnown RBP13.19□□□□□ -0.3
CLN6-216ENST00000636876 hADV38S2A0JD32 116 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 ODAMA1E959 279 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 UBE2QL1A1L167 161 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 A8MV72 311 aaPredicted RBP13.18□□□□□ -0.3
CLN6-216ENST00000636876 RAB27BO00194 218 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 HOXB4P17483 251 aaPredicted RBP13.18□□□□□ -0.3
CLN6-216ENST00000636876 MOGAT2Q3SYC2 334 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 SLC35E4Q6ICL7 350 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 FAHD2BQ6P2I3 314 aaPredicted RBP13.18□□□□□ -0.3
CLN6-216ENST00000636876 ZNF497Q6ZNH5 498 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 TCF23Q7RTU1 214 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 RTN4RL2Q86UN3 420 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 KIR3DL3Q8N743 410 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 OR10R2Q8NGX6 335 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 AP3S1Q92572 193 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 FAHD2AQ96GK7 314 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 ARHGAP5-AS1Q96IT6 56 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 FAAP24Q9BTP7 215 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 TMPRSS13Q9BYE2 586 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 PLEKHJ1Q9NW61 149 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 ETAA1Q9NY74 926 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 ONECUT1Q9UBC0 465 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 KIF25Q9UIL4 384 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 HSF4Q9ULV5 492 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 LINC00312Q9Y6C7 94 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 ANK3Q12955 4377 aaKnown RBP13.18□□□□□ -0.3
CLN6-216ENST00000636876 KIAA2026Q5HYC2 2103 aa13.18□□□□□ -0.3
CLN6-216ENST00000636876 TMEM30CPA0ZSE6 113 aa13.17□□□□□ -0.3
CLN6-216ENST00000636876 CA11O75493 328 aa13.17□□□□□ -0.3
CLN6-216ENST00000636876 SCGNO76038 276 aa13.17□□□□□ -0.3
CLN6-216ENST00000636876 ARF6P62330 175 aa13.17□□□□□ -0.3
CLN6-216ENST00000636876 ZNF273Q14593 569 aa13.17□□□□□ -0.3
CLN6-216ENST00000636876 CR1LQ2VPA4 569 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms