RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 DENND4BO75064 1496 aaPredicted RBP2.36□□□□□ -2.03
PSPC1-208ENST00000635562 COL5A2P05997 1499 aaPredicted RBP2.36□□□□□ -2.03
PSPC1-208ENST00000635562 ABCC10Q5T3U5 1492 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 KMT2EQ8IZD2 1858 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 RLFQ13129 1914 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 MED23Q9ULK4 1368 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 KIF20BQ96Q89 1820 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 NOS1P29475 1434 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 CLIP1P30622 1438 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 MYOM3Q5VTT5 1437 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 SSH2Q76I76 1423 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 RRBP1Q9P2E9 1410 aaKnown RBP2.35□□□□□ -2.03
PSPC1-208ENST00000635562 YEATS2Q9ULM3 1422 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 NCKAP5O14513 1909 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 GRIN2BQ13224 1484 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 CCDC18Q5T9S5 1454 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 IGHV4-61A0A0C4DH41 118 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 A0A0J9YY10 115 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 A0A1B0GX78 115 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 TMEM189A5PLL7 270 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 F6UZH7 168 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 NPIPB9F8W1W9 429 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 J3KT08 172 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 COPEO14579 308 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 CDX4O14627 284 aaPredicted RBP2.35□□□□□ -2.03
PSPC1-208ENST00000635562 GYG2O15488 501 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 TYROBPO43914 113 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 FGF17O60258 216 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 IGLV2-11P01706 119 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 IGHV4-59P01825 116 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 IGHG2P01859 326 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 APOA2P02652 100 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 DBIP07108 87 aaKnown RBP2.35□□□□□ -2.03
PSPC1-208ENST00000635562 PGA4P0DJD7 388 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 PGA3P0DJD8 388 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 PGA5P0DJD9 388 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 OR5H8P0DN80 308 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF708P17019 499 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF30P17039 623 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 CA6P23280 308 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 SRIP30626 198 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 APLNRP35414 380 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 GLRXP35754 106 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 ATP4BP51164 291 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 APOC4P55056 127 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 LIM2P55344 173 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 ABCE1P61221 599 aaKnown RBP2.35□□□□□ -2.03
PSPC1-208ENST00000635562 PPP3R1P63098 170 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 SLC35A2P78381 396 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 SLC35A1P78382 337 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 RUNX3Q13761 415 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 OR7A5Q15622 319 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF239Q16600 458 aaKnown RBP2.35□□□□□ -2.03
PSPC1-208ENST00000635562 IAH1Q2TAA2 248 aaPredicted RBP2.35□□□□□ -2.03
PSPC1-208ENST00000635562 CEACAM16Q2WEN9 425 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 TMEM30BQ3MIR4 351 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 FAM106AQ4KMX7 169 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 ATP6AP1LQ52LC2 224 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 ATP1A1-AS1Q5TC04 95 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 TEX261Q6UWH6 196 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 FAM183BPQ6ZVS7 135 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 CHMP1BQ7LBR1 199 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 TRPT1Q86TN4 253 aaKnown RBP2.35□□□□□ -2.03
PSPC1-208ENST00000635562 OOSP2Q86WS3 158 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 BAP18Q8IXM2 172 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 PDZD9Q8IXQ8 264 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 FAM24BQ8N5W8 94 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 ACBD7Q8N6N7 88 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 COX18Q8N8Q8 333 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 OR2T33Q8NG76 320 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 OR9I1Q8NGQ6 314 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 OR2A1Q8NGT9 310 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 OR1S1Q8NH92 325 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 ZFP90Q8TF47 636 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 SRSF12Q8WXF0 261 aaKnown RBP2.35□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF524Q96C55 264 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 ROPN1LQ96C74 230 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 RNF157Q96PX1 679 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 PLEKHF1Q96S99 279 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 KLF6Q99612 283 aaPredicted RBP2.35□□□□□ -2.03
PSPC1-208ENST00000635562 DOHHQ9BU89 302 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 EMC6Q9BV81 110 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 LINC00470Q9BZP3 86 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 SH3BGRL3Q9H299 93 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 C3orf14Q9HBI5 128 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 ESM1Q9NQ30 184 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 LYRM2Q9NU23 88 aaPredicted RBP2.35□□□□□ -2.03
PSPC1-208ENST00000635562 TMEM38BQ9NVV0 291 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 EHFQ9NZC4 300 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 MRPL27Q9P0M9 148 aaKnown RBP2.35□□□□□ -2.03
PSPC1-208ENST00000635562 C19orf25Q9UFG5 118 aaPredicted RBP2.35□□□□□ -2.03
PSPC1-208ENST00000635562 ANXA10Q9UJ72 324 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 ERG28Q9UKR5 140 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF256Q9Y2P7 627 aaPredicted RBP2.35□□□□□ -2.03
PSPC1-208ENST00000635562 U3KQ87 197 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 REREQ9P2R6 1566 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 CARMIL3Q8ND23 1372 aa2.35□□□□□ -2.03
PSPC1-208ENST00000635562 ATG2AQ2TAZ0 1938 aa2.34□□□□□ -2.03
PSPC1-208ENST00000635562 MIA2Q96PC5 1412 aa2.34□□□□□ -2.03
PSPC1-208ENST00000635562 C2orf16Q68DN1 1984 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms