RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 MSMBP08118 114 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 KRT16P08779 473 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 UBTFL6P0CB48 400 aaPredicted RBP1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 DNAH10OSP0CZ25 163 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 ZNF35P13682 527 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 GATA1P15976 413 aaPredicted RBP1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 TAC1P20366 129 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 NPR2P20594 1047 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 FKBP2P26885 142 aaKnown RBP1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 IL12AP29459 219 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 MDH2P40926 338 aaKnown RBP1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 RFX3P48380 749 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 EVX1P49640 407 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 FABP6P51161 128 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 SH3BGRP55822 239 aaPredicted RBP1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 PLP1P60201 277 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 SNRPD2P62316 118 aaKnown RBP1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 SCRN3Q0VDG4 424 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 MERTKQ12866 999 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 GGTLC2Q14390 218 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 GNMTQ14749 295 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 CASP8Q14790 479 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 OXA1LQ15070 435 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 DGUOKQ16854 277 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 CCDC153Q494R4 210 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 KLF17Q5JT82 389 aaPredicted RBP1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 UTF1Q5T230 341 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 ATAD3CQ5T2N8 411 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 OR2G6Q5TZ20 316 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 CARD17Q5XLA6 110 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 C8orf74Q6P047 294 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 RNASEKQ6P5S7 137 aaKnown RBP1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 CASP12Q6UXS9 341 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 ACOT7LQ6ZUV0 252 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 EIF3MQ7L2H7 374 aaKnown RBP1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 OLIG3Q7RTU3 272 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 COMTD1Q86VU5 262 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 PPP1R27Q86WC6 154 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 ZNF584Q8IVC4 421 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 NUDCD3Q8IVD9 361 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 C10orf107Q8IVU9 208 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 LRRC34Q8IZ02 419 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 CLECL1Q8IZS7 167 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 ZCCHC24Q8N2G6 241 aaKnown RBP1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 KRTCAP2Q8N6L1 136 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 ZDHHC22Q8N966 263 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 OR1L6Q8NGR2 347 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 OR5AK3PQ8NH89 298 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 CLDND2Q8NHS1 167 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 CLHC1Q8NHS4 586 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 SGMS2Q8NHU3 365 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 CDC26Q8NHZ8 85 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 TWIST2Q8WVJ9 160 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 DNAJA4Q8WW22 397 aaPredicted RBP1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 OR5P2Q8WZ92 322 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 YIPF5Q969M3 257 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 TESCQ96BS2 214 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 LRRC58Q96CX6 371 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 MUCL1Q96DR8 90 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 CCDC126Q96EE4 140 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 NEURL3Q96EH8 262 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 VSIG2Q96IQ7 327 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 TEX37Q96LM6 180 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 CCDC115Q96NT0 180 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 OXGR1Q96P68 337 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 ZIM3Q96PE6 472 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 KIR2DL4Q99706 377 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 LINC00470Q9BZP3 86 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 FAM192AQ9GZU8 254 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 PPA2Q9H2U2 334 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 Q9H3A6 140 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 RBKSQ9H477 322 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 NARFLQ9H6Q4 476 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 ZNF702PQ9H963 129 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 RRAGDQ9NQL2 400 aaPredicted RBP1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 MYEF2Q9P2K5 600 aaKnown RBP1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 LGALS13Q9UHV8 139 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 MOKQ9UQ07 419 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 NOSIPQ9Y314 301 aaKnown RBP1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 CSDC2Q9Y534 153 aaKnown RBP1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 N6AMT1Q9Y5N5 214 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 GMEB1Q9Y692 573 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 KMT2AQ03164 3969 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 ARHGAP32A7KAX9 2087 aa1.81□□□□□ -2.12
SMARCB1-208ENST00000634926 TMED7-TICAM2A0A0A6YYA0 188 aa1.8□□□□□ -2.12
SMARCB1-208ENST00000634926 B4DSR2 109 aa1.8□□□□□ -2.12
SMARCB1-208ENST00000634926 C9JVG2 144 aa1.8□□□□□ -2.12
SMARCB1-208ENST00000634926 LOC110117498-PIK3R3F6TDL0 507 aa1.8□□□□□ -2.12
SMARCB1-208ENST00000634926 H3BNH8 94 aa1.8□□□□□ -2.12
SMARCB1-208ENST00000634926 CLDN34H7C241 214 aa1.8□□□□□ -2.12
SMARCB1-208ENST00000634926 J3QLI3 93 aa1.8□□□□□ -2.12
SMARCB1-208ENST00000634926 hCG_2039718K7EN88 272 aa1.8□□□□□ -2.12
SMARCB1-208ENST00000634926 K7N7A8 449 aa1.8□□□□□ -2.12
SMARCB1-208ENST00000634926 RNF13O43567 381 aa1.8□□□□□ -2.12
SMARCB1-208ENST00000634926 EIF1BO60739 113 aaKnown RBP1.8□□□□□ -2.12
SMARCB1-208ENST00000634926 MRPL33O75394 65 aaKnown RBP1.8□□□□□ -2.12
SMARCB1-208ENST00000634926 SERF1AO75920 110 aa1.8□□□□□ -2.12
SMARCB1-208ENST00000634926 SNAP29O95721 258 aa1.8□□□□□ -2.12
SMARCB1-208ENST00000634926 TMEM50AO95807 157 aa1.8□□□□□ -2.12
SMARCB1-208ENST00000634926 LGI1O95970 557 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms