RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 C12orf54Q6X4T0 127 aa3.4□□□□□ -1.87
TRAPPC9-216ENST00000634178 OR2W3Q7Z3T1 314 aa3.4□□□□□ -1.87
TRAPPC9-216ENST00000634178 CRLF3Q8IUI8 442 aa3.4□□□□□ -1.87
TRAPPC9-216ENST00000634178 CBLN2Q8IUK8 224 aa3.4□□□□□ -1.87
TRAPPC9-216ENST00000634178 ASCC1Q8N9N2 400 aaKnown RBP3.4□□□□□ -1.87
TRAPPC9-216ENST00000634178 RPEQ96AT9 228 aa3.4□□□□□ -1.87
TRAPPC9-216ENST00000634178 LRRC58Q96CX6 371 aa3.4□□□□□ -1.87
TRAPPC9-216ENST00000634178 NRBF2Q96F24 287 aa3.4□□□□□ -1.87
TRAPPC9-216ENST00000634178 TRIB3Q96RU7 358 aa3.4□□□□□ -1.87
TRAPPC9-216ENST00000634178 SNRNP25Q9BV90 132 aaKnown RBP3.4□□□□□ -1.87
TRAPPC9-216ENST00000634178 OR52A5Q9H2C5 316 aa3.4□□□□□ -1.87
TRAPPC9-216ENST00000634178 DHX35Q9H5Z1 703 aaKnown RBP3.4□□□□□ -1.87
TRAPPC9-216ENST00000634178 DNAJC12Q9UKB3 198 aa3.4□□□□□ -1.87
TRAPPC9-216ENST00000634178 YLPM1P49750 1951 aaKnown RBP3.4□□□□□ -1.87
TRAPPC9-216ENST00000634178 KMT2CQ8NEZ4 4911 aaKnown RBP3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 TENM1Q9UKZ4 2725 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 IGHV3-64DA0A0J9YX35 117 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 NCBP2LA6PVI3 153 aaKnown RBP3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 H0Y9J4 135 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 NME4O00746 187 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 GABARAPO95166 117 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 SMC2O95347 1197 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 EIF4EP06730 217 aaKnown RBP3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 MAGP20916 626 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 MYL9P24844 172 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 LHX2P50458 406 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 ZNF138P52744 262 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 TAS2R39P59534 338 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 PPP1CBP62140 327 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 ERCC8Q13216 396 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 KIR2DS1Q14954 304 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 GABRA6Q16445 453 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 CYB5R2Q6BCY4 276 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 ARL9Q6T311 187 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 PCP2Q8IVA1 136 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 SPERTQ8NA61 448 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 DUSP18Q8NEJ0 188 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 TFGQ92734 400 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 MRGPRFQ96AM1 343 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 RNF185Q96GF1 192 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 WFIKKN1Q96NZ8 548 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 CCL19Q99731 98 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 SELENOSQ9BQE4 189 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 ARMC7Q9H6L4 198 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 MED4Q9NPJ6 270 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 EML6Q6ZMW3 1958 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 FREM1Q5H8C1 2179 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 HEATR5AQ86XA9 2040 aa3.39□□□□□ -1.87
TRAPPC9-216ENST00000634178 NBEAL2Q6ZNJ1 2754 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 TRBV6-6A0A0A6YYG2 114 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 IGLV1-36A0A0B4J1U3 117 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 IGHV3-66A0A0C4DH42 116 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 LOC100653049A0A140TA62 436 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 ZNF879B4DU55 563 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 F8VZ95 297 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 INS-IGF2F8WCM5 200 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 H3BN98 237 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 ERI3O43414 337 aaKnown RBP3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 KRT34O76011 436 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 GLSO94925 669 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 STATHP02808 62 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 HLA-DQB2P05538 268 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 USF1P22415 310 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 PEBP1P30086 187 aaKnown RBP3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 PFN2P35080 140 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 PCK1P35558 622 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 CFHR2P36980 270 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 CSNK1A1P48729 337 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 FABP6P51161 128 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 RELAQ04206 551 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 PPIDQ08752 370 aaKnown RBP3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 FAM53BQ14153 422 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 PAFAH1B3Q15102 231 aaKnown RBP3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 FAM83EQ2M2I3 478 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 ZNF829Q3KNS6 432 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 C6orf52Q5T4I8 152 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 METTL21CQ5VZV1 264 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 PPP1R2P3Q6NXS1 205 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 DNAJC24Q6P3W2 148 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 RPS19BP1Q86WX3 136 aaKnown RBP3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 KIF2BQ8N4N8 673 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 OR6K6Q8NGW6 343 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 ABHD3Q8WU67 409 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 LRRC29Q8WV35 223 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 RNF138Q8WVD3 245 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 MCEEQ96PE7 176 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 PEBP4Q96S96 227 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 CYTH2Q99418 400 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 REG4Q9BYZ8 158 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 RBM22Q9NW64 420 aaKnown RBP eCLIP3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 PSG8Q9UQ74 426 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 KPTNQ9Y664 436 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 HEATR5BQ9P2D3 2071 aa3.38□□□□□ -1.87
TRAPPC9-216ENST00000634178 MED12Q93074 2177 aa3.37□□□□□ -1.87
TRAPPC9-216ENST00000634178 IGLV3-16A0A075B6K0 115 aa3.37□□□□□ -1.87
TRAPPC9-216ENST00000634178 DEFB108AA8MXU0 73 aa3.37□□□□□ -1.87
TRAPPC9-216ENST00000634178 HACD1B0YJ81 288 aa3.37□□□□□ -1.87
TRAPPC9-216ENST00000634178 TXNDC9O14530 226 aa3.37□□□□□ -1.87
TRAPPC9-216ENST00000634178 LIN7AO14910 233 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC9-216ENST00000634178 ZNF861PO60384 105 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms