RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 MSMBP08118 114 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 UBCP0CG48 685 aaKnown RBP4.07□□□□□ -1.76
LINC00550-201ENST00000629293 LYL1P12980 280 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 CXCL2P19875 107 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 HTR2CP28335 458 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 DEFA6Q01524 100 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 GLT8D1Q68CQ7 371 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 DCXRQ7Z4W1 244 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.07□□□□□ -1.76
LINC00550-201ENST00000629293 FTMTQ8N4E7 242 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 TMEM229BQ8NBD8 167 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 BEND2Q8NDZ0 799 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 Q8NFD4 153 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 OR52B4Q8NGK2 314 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 OR10S1Q8NGN2 331 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 NEU4Q8WWR8 484 aaPredicted RBP4.07□□□□□ -1.76
LINC00550-201ENST00000629293 DACT3Q96B18 629 aaPredicted RBP4.07□□□□□ -1.76
LINC00550-201ENST00000629293 SEH1LQ96EE3 360 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 MRPL13Q9BYD1 178 aaKnown RBP4.07□□□□□ -1.76
LINC00550-201ENST00000629293 ALX4Q9H161 411 aaPredicted RBP4.07□□□□□ -1.76
LINC00550-201ENST00000629293 MED29Q9NX70 200 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 CKLFQ9UBR5 152 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 OPN4Q9UHM6 478 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 OR52A1Q9UKL2 312 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 C9orf118A6NHY6 69 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 SYNGR3O43761 229 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 SNAPC5O75971 98 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 IFNA7P01567 189 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 CD2P06729 351 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF735P0CB33 412 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 FKBP2P26885 142 aaKnown RBP4.07□□□□□ -1.76
LINC00550-201ENST00000629293 PRSS3P35030 304 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 RBMXP38159 391 aaKnown RBP4.07□□□□□ -1.76
LINC00550-201ENST00000629293 PPOXP50336 477 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 AP2S1P53680 142 aaPredicted RBP4.07□□□□□ -1.76
LINC00550-201ENST00000629293 H2BFSP57053 126 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 ACTBP60709 375 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 TSPAN5P62079 268 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 QRFPP83859 136 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 POU3F1Q03052 451 aaPredicted RBP4.07□□□□□ -1.76
LINC00550-201ENST00000629293 MPPED2Q15777 294 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 GRK1Q15835 563 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 C2orf68Q2NKX9 166 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 RBMS3Q6XE24 437 aaKnown RBP4.07□□□□□ -1.76
LINC00550-201ENST00000629293 OR13C3Q8NGS6 347 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 ASB13Q8WXK3 278 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 SLC25A44Q96H78 314 aaPredicted RBP4.07□□□□□ -1.76
LINC00550-201ENST00000629293 NKX3-1Q99801 234 aaPredicted RBP4.07□□□□□ -1.76
LINC00550-201ENST00000629293 SLC6A7Q99884 636 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 GINS4Q9BRT9 223 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 MEGF9Q9H1U4 602 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 MYEF2Q9P2K5 600 aaKnown RBP4.07□□□□□ -1.76
LINC00550-201ENST00000629293 CYB5R1Q9UHQ9 305 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 MARCH11A6NNE9 402 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 TRIM77I1YAP6 450 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 RGS11O94810 467 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 VAMP5O95183 116 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 TTRP02766 147 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 CD3DP04234 171 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 GTF2F2P13984 249 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF823P16415 610 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 MPZP25189 248 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 TAS2R19P59542 299 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 GLYATL3Q5SZD4 288 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 TMEM244Q5VVB8 128 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 RGS7BPQ6MZT1 257 aaPredicted RBP4.07□□□□□ -1.76
LINC00550-201ENST00000629293 STEAP1BQ6NZ63 245 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 LINC00346Q8IVM7 164 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 OR2AK2Q8NG84 335 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 OR51S1Q8NGJ8 323 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 OR51F2Q8NH61 342 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 C11orf40Q8WZ69 217 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 AQP3Q92482 292 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 GAL3ST1Q99999 423 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 DPCDQ9BVM2 203 aaPredicted RBP4.07□□□□□ -1.76
LINC00550-201ENST00000629293 SF3B5Q9BWJ5 86 aaKnown RBP4.07□□□□□ -1.76
LINC00550-201ENST00000629293 ATG5Q9H1Y0 275 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 PCDHB16Q9NRJ7 776 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 UBQLN2Q9UHD9 624 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 GAGE10A6NGK3 116 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF726A6NNF4 738 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 HMSDA8MTL9 139 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 MCRIP1C9JLW8 97 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 TRAF3IP2O43734 574 aaPredicted RBP4.06□□□□□ -1.76
LINC00550-201ENST00000629293 ACSM4P0C7M7 580 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 PGA4P0DJD7 388 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 PGA3P0DJD8 388 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 CBR1P16152 277 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 ZFP36P26651 326 aaKnown RBP4.06□□□□□ -1.76
LINC00550-201ENST00000629293 HSD11B1P28845 292 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 ARR3P36575 388 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 CAPZA1P52907 286 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 LCN2P80188 198 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 OPCMLQ14982 345 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 EFNB3Q15768 340 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 MOGAT2Q3SYC2 334 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 MIDNQ504T8 468 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 NHLRC3Q5JS37 347 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 XP32Q5T750 250 aa4.06□□□□□ -1.76
LINC00550-201ENST00000629293 DCAF12L2Q5VW00 463 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms