RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 LIPFP07098 398 aa12.14□□□□□ -0.47
PNKP-221ENST00000627317 PPIAL4GP0DN37 164 aa12.14□□□□□ -0.47
PNKP-221ENST00000627317 SNRPBP14678 240 aaKnown RBP12.14□□□□□ -0.47
PNKP-221ENST00000627317 RPS19P39019 145 aaKnown RBP12.14□□□□□ -0.47
PNKP-221ENST00000627317 KCNJ3P48549 501 aa12.14□□□□□ -0.47
PNKP-221ENST00000627317 TMBIM6P55061 237 aa12.14□□□□□ -0.47
PNKP-221ENST00000627317 RAB12Q6IQ22 244 aa12.14□□□□□ -0.47
PNKP-221ENST00000627317 METAP1DQ6UB28 335 aaPredicted RBP12.14□□□□□ -0.47
PNKP-221ENST00000627317 C8orf46Q8TAG6 207 aa12.14□□□□□ -0.47
PNKP-221ENST00000627317 NDNFQ8TB73 568 aa12.14□□□□□ -0.47
PNKP-221ENST00000627317 LGALS14Q8TCE9 139 aa12.14□□□□□ -0.47
PNKP-221ENST00000627317 DACT3Q96B18 629 aaPredicted RBP12.14□□□□□ -0.47
PNKP-221ENST00000627317 TM2D1Q9BX74 207 aa12.14□□□□□ -0.47
PNKP-221ENST00000627317 TMPRSS13Q9BYE2 586 aa12.14□□□□□ -0.47
PNKP-221ENST00000627317 DCSTAMPQ9H295 470 aa12.14□□□□□ -0.47
PNKP-221ENST00000627317 C19orf12Q9NSK7 152 aa12.14□□□□□ -0.47
PNKP-221ENST00000627317 ING3Q9NXR8 418 aa12.14□□□□□ -0.47
PNKP-221ENST00000627317 ONECUT1Q9UBC0 465 aa12.14□□□□□ -0.47
PNKP-221ENST00000627317 RAB22AQ9UL26 194 aa12.14□□□□□ -0.47
PNKP-221ENST00000627317 PEX16Q9Y5Y5 336 aa12.14□□□□□ -0.47
PNKP-221ENST00000627317 FBN3Q75N90 2809 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 KIR2DS1A0A191URI9 304 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 A0A1W2PPH5 198 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 CCDC160A6NGH7 325 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 MCRIP1C9JLW8 97 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 LDLRAD4O15165 306 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 TMEM127O75204 238 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 PDCD6O75340 191 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 CSN2P05814 226 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 RAB6AP20340 208 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 FUT3P21217 361 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 P2RX3P56373 397 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 FAM189A2Q15884 450 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 KRBOX4Q5JUW0 171 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 NKAPLQ5M9Q1 402 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 CMTM4Q8IZR5 234 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 BPIFB2Q8N4F0 458 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 TPRX1Q8N7U7 411 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 LY6G5BQ8NDX9 201 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 SLC25A46Q96AG3 418 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 NEDD4LQ96PU5 975 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 NICN1Q9BSH3 213 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 LPAR5Q9H1C0 372 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 C7orf69Q9H7B7 122 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 RCC2Q9P258 522 aaKnown RBP12.13□□□□□ -0.47
PNKP-221ENST00000627317 OPN4Q9UHM6 478 aa12.13□□□□□ -0.47
PNKP-221ENST00000627317 hADV38S2A0JD32 116 aa12.12□□□□□ -0.47
PNKP-221ENST00000627317 PAHP00439 452 aa12.12□□□□□ -0.47
PNKP-221ENST00000627317 FSHBP01225 129 aa12.12□□□□□ -0.47
PNKP-221ENST00000627317 ERP29P30040 261 aaKnown RBP12.12□□□□□ -0.47
PNKP-221ENST00000627317 BLVRBP30043 206 aaPredicted RBP12.12□□□□□ -0.47
PNKP-221ENST00000627317 SCAND1P57086 179 aa12.12□□□□□ -0.47
PNKP-221ENST00000627317 MEF2CQ06413 473 aaPredicted RBP12.12□□□□□ -0.47
PNKP-221ENST00000627317 AESQ08117 197 aa12.12□□□□□ -0.47
PNKP-221ENST00000627317 PLA2G7Q13093 441 aa12.12□□□□□ -0.47
PNKP-221ENST00000627317 RBM39Q14498 530 aaKnown RBP12.12□□□□□ -0.47
PNKP-221ENST00000627317 KRTAP24-1Q3LI83 254 aa12.12□□□□□ -0.47
PNKP-221ENST00000627317 METTL11BQ5VVY1 283 aa12.12□□□□□ -0.47
PNKP-221ENST00000627317 BRICD5Q6PL45 260 aa12.12□□□□□ -0.47
PNKP-221ENST00000627317 TRAPPC6BQ86SZ2 158 aa12.12□□□□□ -0.47
PNKP-221ENST00000627317 KIR3DL3Q8N743 410 aa12.12□□□□□ -0.47
PNKP-221ENST00000627317 OR56B1Q8NGI3 324 aa12.12□□□□□ -0.47
PNKP-221ENST00000627317 SPATA3Q8NHX4 192 aa12.12□□□□□ -0.47
PNKP-221ENST00000627317 PTX4Q96A99 478 aa12.12□□□□□ -0.47
PNKP-221ENST00000627317 DMRTB1Q96MA1 342 aa12.12□□□□□ -0.47
PNKP-221ENST00000627317 BARHL1Q9BZE3 327 aa12.12□□□□□ -0.47
PNKP-221ENST00000627317 ETV7Q9Y603 341 aa12.12□□□□□ -0.47
PNKP-221ENST00000627317 AUP1Q9Y679 476 aa12.12□□□□□ -0.47
PNKP-221ENST00000627317 A0A0A6YYD4 124 aa12.11□□□□□ -0.47
PNKP-221ENST00000627317 ODAMA1E959 279 aa12.11□□□□□ -0.47
PNKP-221ENST00000627317 MEX3AA1L020 520 aaKnown RBP12.11□□□□□ -0.47
PNKP-221ENST00000627317 METTL21EPA6NDL7 271 aa12.11□□□□□ -0.47
PNKP-221ENST00000627317 GLAP06280 429 aa12.11□□□□□ -0.47
PNKP-221ENST00000627317 CHATP28329 748 aa12.11□□□□□ -0.47
PNKP-221ENST00000627317 GLIPR1P48060 266 aa12.11□□□□□ -0.47
PNKP-221ENST00000627317 VEGFCP49767 419 aa12.11□□□□□ -0.47
PNKP-221ENST00000627317 EFNB2P52799 333 aa12.11□□□□□ -0.47
PNKP-221ENST00000627317 ARF6P62330 175 aa12.11□□□□□ -0.47
PNKP-221ENST00000627317 PAX8Q06710 450 aa12.11□□□□□ -0.47
PNKP-221ENST00000627317 BLMHQ13867 455 aa12.11□□□□□ -0.47
PNKP-221ENST00000627317 SIGIRRQ6IA17 410 aa12.11□□□□□ -0.47
PNKP-221ENST00000627317 TEX29Q8N6K0 151 aa12.11□□□□□ -0.47
PNKP-221ENST00000627317 PLPPR1Q8TBJ4 325 aa12.11□□□□□ -0.47
PNKP-221ENST00000627317 ISOC1Q96CN7 298 aa12.11□□□□□ -0.47
PNKP-221ENST00000627317 COQ2Q96H96 371 aa12.11□□□□□ -0.47
PNKP-221ENST00000627317 ETAA1Q9NY74 926 aa12.11□□□□□ -0.47
PNKP-221ENST00000627317 ABRACLQ9P1F3 81 aa12.11□□□□□ -0.47
PNKP-221ENST00000627317 KIF25Q9UIL4 384 aa12.11□□□□□ -0.47
PNKP-221ENST00000627317 KPTNQ9Y664 436 aa12.11□□□□□ -0.47
PNKP-221ENST00000627317 LINC00312Q9Y6C7 94 aa12.11□□□□□ -0.47
PNKP-221ENST00000627317 MEIKINA0A087WXM9 373 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 TRGV10A0A0A0MS01 117 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 TMEM30CPA0ZSE6 113 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 UBE2QL1A1L167 161 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 RNF212BA8MTL3 300 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 H3BMQ9 156 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 M0R1W7 72 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 SOCS1O15524 211 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 TOX4O94842 621 aa12.1□□□□□ -0.47
PNKP-221ENST00000627317 SRP14P37108 136 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms