RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 RDH10Q8IZV5 341 aa11.49□□□□□ -0.57
PNKP-218ENST00000625299 OR8H3Q8N146 312 aa11.49□□□□□ -0.57
PNKP-218ENST00000625299 DNAAF1Q8NEP3 725 aa11.49□□□□□ -0.57
PNKP-218ENST00000625299 OR11H1Q8NG94 326 aa11.49□□□□□ -0.57
PNKP-218ENST00000625299 OR10X1Q8NGY0 326 aa11.49□□□□□ -0.57
PNKP-218ENST00000625299 ADAT3Q96EY9 351 aaPredicted RBP11.49□□□□□ -0.57
PNKP-218ENST00000625299 CALYQ9NYX4 217 aa11.49□□□□□ -0.57
PNKP-218ENST00000625299 PSG11Q9UQ72 335 aa11.49□□□□□ -0.57
PNKP-218ENST00000625299 SIRT4Q9Y6E7 314 aaPredicted RBP11.49□□□□□ -0.57
PNKP-218ENST00000625299 A0A1W2PPE3 182 aa11.48□□□□□ -0.57
PNKP-218ENST00000625299 B2RBV5 119 aa11.48□□□□□ -0.57
PNKP-218ENST00000625299 SLC33A1O00400 549 aaPredicted RBP11.48□□□□□ -0.57
PNKP-218ENST00000625299 DEGS1O15121 323 aa11.48□□□□□ -0.57
PNKP-218ENST00000625299 APOL3O95236 402 aa11.48□□□□□ -0.57
PNKP-218ENST00000625299 CSN2P05814 226 aa11.48□□□□□ -0.57
PNKP-218ENST00000625299 ELANEP08246 267 aa11.48□□□□□ -0.57
PNKP-218ENST00000625299 FRMD6-AS1P0C7T7 363 aa11.48□□□□□ -0.57
PNKP-218ENST00000625299 ZNF20P17024 532 aa11.48□□□□□ -0.57
PNKP-218ENST00000625299 ATF1P18846 271 aa11.48□□□□□ -0.57
PNKP-218ENST00000625299 PRKACBP22694 351 aa11.48□□□□□ -0.57
PNKP-218ENST00000625299 REG1BP48304 166 aa11.48□□□□□ -0.57
PNKP-218ENST00000625299 FAM27D1Q5T7N8 215 aa11.48□□□□□ -0.57
PNKP-218ENST00000625299 ADAMTSL5Q6ZMM2 481 aa11.48□□□□□ -0.57
PNKP-218ENST00000625299 TCEANCQ8N8B7 351 aa11.48□□□□□ -0.57
PNKP-218ENST00000625299 CCDC54Q8NEL0 328 aa11.48□□□□□ -0.57
PNKP-218ENST00000625299 HAVCR2Q8TDQ0 301 aa11.48□□□□□ -0.57
PNKP-218ENST00000625299 C4orf3Q8WVX3 66 aa11.48□□□□□ -0.57
PNKP-218ENST00000625299 SPACA5Q96QH8 159 aa11.48□□□□□ -0.57
PNKP-218ENST00000625299 PRRG3Q9BZD7 231 aa11.48□□□□□ -0.57
PNKP-218ENST00000625299 COMMD4Q9H0A8 199 aa11.48□□□□□ -0.57
PNKP-218ENST00000625299 IDI2-AS1Q9NZ38 188 aa11.48□□□□□ -0.57
PNKP-218ENST00000625299 CSMD3Q7Z407 3707 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 HYDINQ4G0P3 5121 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 MEIKINA0A087WXM9 373 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 METTL15A6NJ78 407 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 HSD17B6O14756 317 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 RRP9O43818 475 aaKnown RBP11.47□□□□□ -0.57
PNKP-218ENST00000625299 KDM4BO94953 1096 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 UBCP0CG48 685 aaKnown RBP11.47□□□□□ -0.57
PNKP-218ENST00000625299 VDAC1P21796 283 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 FHL3Q13643 280 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 PTGES3Q15185 160 aaKnown RBP11.47□□□□□ -0.57
PNKP-218ENST00000625299 Q6P435 159 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 TGIF2LXQ8IUE1 241 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 ARHGAP24Q8N264 748 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 PRSS35Q8N3Z0 413 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 ZNF565Q8N9K5 539 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 CHST4Q8NCG5 386 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 OR13A1Q8NGR1 328 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 RFESDQ8TAC1 157 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 CANT1Q8WVQ1 401 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 FGGYQ96C11 551 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 C10orf35Q96D05 121 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 RNFT2Q96EX2 444 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 EAF1Q96JC9 268 aaPredicted RBP11.47□□□□□ -0.57
PNKP-218ENST00000625299 OPALINQ96PE5 141 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 ABCG5Q9H222 651 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 ISYNA1Q9NPH2 558 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 KRT84Q9NSB2 600 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 LIN7CQ9NUP9 197 aaKnown RBP11.47□□□□□ -0.57
PNKP-218ENST00000625299 ZNF446Q9NWS9 450 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 KIF25Q9UIL4 384 aa11.47□□□□□ -0.57
PNKP-218ENST00000625299 A0A1W2PQL4 384 aaPredicted RBP11.46□□□□□ -0.57
PNKP-218ENST00000625299 CCRL2O00421 344 aa11.46□□□□□ -0.57
PNKP-218ENST00000625299 IL1AP01583 271 aa11.46□□□□□ -0.57
PNKP-218ENST00000625299 AADACL4Q5VUY2 407 aa11.46□□□□□ -0.57
PNKP-218ENST00000625299 NXNL2Q5VZ03 156 aa11.46□□□□□ -0.57
PNKP-218ENST00000625299 OR10H4Q8NGA5 316 aa11.46□□□□□ -0.57
PNKP-218ENST00000625299 MRGPRDQ8TDS7 321 aa11.46□□□□□ -0.57
PNKP-218ENST00000625299 SPSB1Q96BD6 273 aa11.46□□□□□ -0.57
PNKP-218ENST00000625299 ASB9Q96DX5 294 aa11.46□□□□□ -0.57
PNKP-218ENST00000625299 OR5B12Q96R08 314 aa11.46□□□□□ -0.57
PNKP-218ENST00000625299 CITED4Q96RK1 184 aa11.46□□□□□ -0.57
PNKP-218ENST00000625299 IL4I1Q96RQ9 567 aa11.46□□□□□ -0.57
PNKP-218ENST00000625299 OSBPL10Q9BXB5 764 aa11.46□□□□□ -0.57
PNKP-218ENST00000625299 IGHV1-3A0A0C4DH29 117 aa11.45□□□□□ -0.58
PNKP-218ENST00000625299 H0YJX3 145 aa11.45□□□□□ -0.58
PNKP-218ENST00000625299 MPZL2O60487 215 aa11.45□□□□□ -0.58
PNKP-218ENST00000625299 C21orf33P30042 268 aaPredicted RBP11.45□□□□□ -0.58
PNKP-218ENST00000625299 SSTR5P35346 364 aa11.45□□□□□ -0.58
PNKP-218ENST00000625299 KIR3DL2P43630 455 aa11.45□□□□□ -0.58
PNKP-218ENST00000625299 INSL3P51460 131 aa11.45□□□□□ -0.58
PNKP-218ENST00000625299 PAN3Q58A45 887 aaKnown RBP11.45□□□□□ -0.58
PNKP-218ENST00000625299 FAM220AQ7Z4H9 259 aa11.45□□□□□ -0.58
PNKP-218ENST00000625299 GID4Q8IVV7 300 aa11.45□□□□□ -0.58
PNKP-218ENST00000625299 RNF152Q8N8N0 203 aa11.45□□□□□ -0.58
PNKP-218ENST00000625299 Q8N9W7 124 aa11.45□□□□□ -0.58
PNKP-218ENST00000625299 OR13C9Q8NGT0 318 aa11.45□□□□□ -0.58
PNKP-218ENST00000625299 OR2T10Q8NGZ9 312 aa11.45□□□□□ -0.58
PNKP-218ENST00000625299 TMEM163Q8TC26 289 aa11.45□□□□□ -0.58
PNKP-218ENST00000625299 NR1H4Q96RI1 486 aaPredicted RBP11.45□□□□□ -0.58
PNKP-218ENST00000625299 RASL11BQ9BPW5 248 aa11.45□□□□□ -0.58
PNKP-218ENST00000625299 HSPB9Q9BQS6 159 aa11.45□□□□□ -0.58
PNKP-218ENST00000625299 GNG8Q9UK08 70 aa11.45□□□□□ -0.58
PNKP-218ENST00000625299 TRAV39A0A0B4J263 110 aa11.44□□□□□ -0.58
PNKP-218ENST00000625299 SAP30O75446 220 aa11.44□□□□□ -0.58
PNKP-218ENST00000625299 DCTN3O75935 186 aa11.44□□□□□ -0.58
PNKP-218ENST00000625299 GAPDHP04406 335 aaKnown RBP11.44□□□□□ -0.58
PNKP-218ENST00000625299 HCKP08631 526 aa11.44□□□□□ -0.58
PNKP-218ENST00000625299 OR8U8P0C7N1 319 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms