RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 C5orf64Q2M2E5 130 aa4.4□□□□□ -1.71
CDKL5-204ENST00000623364 TMEM69Q5SWH9 247 aa4.4□□□□□ -1.71
CDKL5-204ENST00000623364 LRIF1Q5T3J3 769 aa4.4□□□□□ -1.71
CDKL5-204ENST00000623364 SLX4IPQ5VYV7 408 aa4.4□□□□□ -1.71
CDKL5-204ENST00000623364 SSX7Q7RTT5 188 aa4.4□□□□□ -1.71
CDKL5-204ENST00000623364 LINC00346Q8IVM7 164 aa4.4□□□□□ -1.71
CDKL5-204ENST00000623364 LINC00471Q8N535 108 aa4.4□□□□□ -1.71
CDKL5-204ENST00000623364 GBGT1Q8N5D6 347 aa4.4□□□□□ -1.71
CDKL5-204ENST00000623364 POC5Q8NA72 575 aa4.4□□□□□ -1.71
CDKL5-204ENST00000623364 DNAAF1Q8NEP3 725 aa4.4□□□□□ -1.71
CDKL5-204ENST00000623364 LFNGQ8NES3 379 aa4.4□□□□□ -1.71
CDKL5-204ENST00000623364 BBS1Q8NFJ9 593 aa4.4□□□□□ -1.71
CDKL5-204ENST00000623364 PPP1R14BQ96C90 147 aa4.4□□□□□ -1.71
CDKL5-204ENST00000623364 PPP3R2Q96LZ3 170 aa4.4□□□□□ -1.71
CDKL5-204ENST00000623364 ZNF251Q9BRH9 671 aa4.4□□□□□ -1.71
CDKL5-204ENST00000623364 C1orf50Q9BV19 199 aa4.4□□□□□ -1.71
CDKL5-204ENST00000623364 CHST5Q9GZS9 411 aa4.4□□□□□ -1.71
CDKL5-204ENST00000623364 PARP12Q9H0J9 701 aaKnown RBP4.4□□□□□ -1.71
CDKL5-204ENST00000623364 PNRC2Q9NPJ4 139 aaKnown RBP4.4□□□□□ -1.71
CDKL5-204ENST00000623364 MEPEQ9NQ76 525 aaPredicted RBP4.4□□□□□ -1.71
CDKL5-204ENST00000623364 GRHPRQ9UBQ7 328 aa4.4□□□□□ -1.71
CDKL5-204ENST00000623364 OR4C46A6NHA9 309 aa4.39□□□□□ -1.71
CDKL5-204ENST00000623364 CCDC154A6NI56 674 aa4.39□□□□□ -1.71
CDKL5-204ENST00000623364 DYNC1I1O14576 645 aa4.39□□□□□ -1.71
CDKL5-204ENST00000623364 TPST2O60704 377 aa4.39□□□□□ -1.71
CDKL5-204ENST00000623364 MT-ND1P03886 318 aa4.39□□□□□ -1.71
CDKL5-204ENST00000623364 DSTNP60981 165 aa4.39□□□□□ -1.71
CDKL5-204ENST00000623364 CLINT1Q14677 625 aa4.39□□□□□ -1.71
CDKL5-204ENST00000623364 PTGES3Q15185 160 aaKnown RBP4.39□□□□□ -1.71
CDKL5-204ENST00000623364 DHRS4L2Q6PKH6 230 aa4.39□□□□□ -1.71
CDKL5-204ENST00000623364 FAM131AQ6UXB0 335 aa4.39□□□□□ -1.71
CDKL5-204ENST00000623364 SCXQ7RTU7 201 aa4.39□□□□□ -1.71
CDKL5-204ENST00000623364 AMIGO2Q86SJ2 522 aa4.39□□□□□ -1.71
CDKL5-204ENST00000623364 OR4C15Q8NGM1 316 aa4.39□□□□□ -1.71
CDKL5-204ENST00000623364 RTN4IP1Q8WWV3 396 aaPredicted RBP4.39□□□□□ -1.71
CDKL5-204ENST00000623364 EMG1Q92979 244 aaKnown RBP4.39□□□□□ -1.71
CDKL5-204ENST00000623364 USMG5Q96IX5 58 aa4.39□□□□□ -1.71
CDKL5-204ENST00000623364 MCHR1Q99705 422 aa4.39□□□□□ -1.71
CDKL5-204ENST00000623364 HES4Q9HCC6 221 aa4.39□□□□□ -1.71
CDKL5-204ENST00000623364 THUMPD1Q9NXG2 353 aaKnown RBP4.39□□□□□ -1.71
CDKL5-204ENST00000623364 TBC1D24Q9ULP9 559 aa4.39□□□□□ -1.71
CDKL5-204ENST00000623364 SLC7A7Q9UM01 511 aa4.39□□□□□ -1.71
CDKL5-204ENST00000623364 POLDIP2Q9Y2S7 368 aa4.39□□□□□ -1.71
CDKL5-204ENST00000623364 FIS1Q9Y3D6 152 aa4.39□□□□□ -1.71
CDKL5-204ENST00000623364 X6R8D5 127 aa4.39□□□□□ -1.71
CDKL5-204ENST00000623364 RPS10-NUDT3A0A1W2PQS6 291 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 OR5B21A6NL26 309 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 CPSF4LA6NMK7 179 aaKnown RBP4.38□□□□□ -1.71
CDKL5-204ENST00000623364 ZNF729A6NN14 1252 aaPredicted RBP4.38□□□□□ -1.71
CDKL5-204ENST00000623364 NBR2O15453 112 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 PEX11AO75192 247 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 NUDT3O95989 172 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 ALDOCP09972 364 aaKnown RBP4.38□□□□□ -1.71
CDKL5-204ENST00000623364 PRKXP51817 358 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 CLDN8P56748 225 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 NAA20P61599 178 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 BNIP1Q12981 228 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 MED21Q13503 144 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 CASP8Q14790 479 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 TMEM41BQ5BJD5 291 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 ZNF773Q6PK81 442 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 ZNF621Q6ZSS3 439 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 NFE4Q86UQ8 179 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 BATF2Q8N1L9 274 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 OR52N4Q8NGI2 321 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 MRGPRDQ8TDS7 321 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 TSPEARQ8WU66 669 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 FAM103A1Q9BTL3 118 aaKnown RBP4.38□□□□□ -1.71
CDKL5-204ENST00000623364 ZNF426Q9BUY5 554 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 SYT4Q9H2B2 425 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 TUBB1Q9H4B7 451 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 RAD21L1Q9H4I0 556 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 BCL2L10Q9HD36 194 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 AIG1Q9NVV5 245 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 GIMAP2Q9UG22 337 aa4.38□□□□□ -1.71
CDKL5-204ENST00000623364 NEBP20929 6669 aa4.37□□□□□ -1.71
CDKL5-204ENST00000623364 TEX48A0A1B0GUV7 120 aa4.37□□□□□ -1.71
CDKL5-204ENST00000623364 C5orf58C9J3I9 102 aa4.37□□□□□ -1.71
CDKL5-204ENST00000623364 J3QT63 122 aa4.37□□□□□ -1.71
CDKL5-204ENST00000623364 TSPAN4O14817 238 aa4.37□□□□□ -1.71
CDKL5-204ENST00000623364 TXNL1O43396 289 aa4.37□□□□□ -1.71
CDKL5-204ENST00000623364 TPST1O60507 370 aa4.37□□□□□ -1.71
CDKL5-204ENST00000623364 MRPS14O60783 128 aaKnown RBP4.37□□□□□ -1.71
CDKL5-204ENST00000623364 REG1AP05451 166 aa4.37□□□□□ -1.71
CDKL5-204ENST00000623364 IL3RAP26951 378 aa4.37□□□□□ -1.71
CDKL5-204ENST00000623364 CMC4P56277 68 aaPredicted RBP4.37□□□□□ -1.71
CDKL5-204ENST00000623364 LINC01547P58512 204 aaPredicted RBP4.37□□□□□ -1.71
CDKL5-204ENST00000623364 CEACAM21Q3KPI0 293 aa4.37□□□□□ -1.71
CDKL5-204ENST00000623364 SLC36A3Q495N2 470 aa4.37□□□□□ -1.71
CDKL5-204ENST00000623364 KLHL12Q53G59 568 aa4.37□□□□□ -1.71
CDKL5-204ENST00000623364 CEP78Q5JTW2 689 aa4.37□□□□□ -1.71
CDKL5-204ENST00000623364 ATAD3CQ5T2N8 411 aa4.37□□□□□ -1.71
CDKL5-204ENST00000623364 SLC16A12Q6ZSM3 486 aa4.37□□□□□ -1.71
CDKL5-204ENST00000623364 KRT73Q86Y46 540 aa4.37□□□□□ -1.71
CDKL5-204ENST00000623364 FNDC5Q8NAU1 212 aa4.37□□□□□ -1.71
CDKL5-204ENST00000623364 C11orf65Q8NCR3 313 aa4.37□□□□□ -1.71
CDKL5-204ENST00000623364 ADAD2Q8NCV1 583 aaKnown RBP4.37□□□□□ -1.71
CDKL5-204ENST00000623364 FAM156AQ8NDB6 213 aa4.37□□□□□ -1.71
CDKL5-204ENST00000623364 OR5A2Q8NGI9 324 aa4.37□□□□□ -1.71
CDKL5-204ENST00000623364 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms