RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 DPM3Q9P2X0 92 aa9.11□□□□□ -0.95
CPNE3-210ENST00000621245 HHLA2Q9UM44 414 aa9.11□□□□□ -0.95
CPNE3-210ENST00000621245 RYR2Q92736 4967 aa9.11□□□□□ -0.95
CPNE3-210ENST00000621245 TRGV10A0A0A0MS01 117 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 TRAV39A0A0B4J263 110 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 TRAV24A0A0B4J272 114 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 SH2D1BO14796 132 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 ZFPL1O95159 310 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 CYB5AP00167 134 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 MT-ND2P03891 347 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 DBTP11182 482 aaKnown RBP9.1□□□□□ -0.95
CPNE3-210ENST00000621245 CD34P28906 385 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 PTGFRP43088 359 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 OR3A4PP47883 348 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 CCR9P51686 369 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 GTF2A1P52655 376 aaPredicted RBP9.1□□□□□ -0.95
CPNE3-210ENST00000621245 RBM39Q14498 530 aaKnown RBP9.1□□□□□ -0.95
CPNE3-210ENST00000621245 HLA-DRB5Q30154 266 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 SLC25A30Q5SVS4 291 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 XAF1Q6GPH4 301 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 FAM53AQ6NSI3 398 aaPredicted RBP9.1□□□□□ -0.95
CPNE3-210ENST00000621245 C18orf65Q6ZTR6 163 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 CBR4Q8N4T8 237 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 ACBD7Q8N6N7 88 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 OR13A1Q8NGR1 328 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 OR10K1Q8NGX5 313 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 PLPPR1Q8TBJ4 325 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 FBLIM1Q8WUP2 373 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 APH1BQ8WW43 257 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 MYDGFQ969H8 173 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 ZCCHC4Q9H5U6 513 aa9.1□□□□□ -0.95
CPNE3-210ENST00000621245 TENM3Q9P273 2699 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 BUB1B-PAK6H3BSN5 160 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 GABRPO00591 440 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 PEX14O75381 377 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 CIB2O75838 187 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 CGB3P0DN86 165 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 CGB7P0DN87 165 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 NFYBP25208 207 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 GLP1RP43220 463 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 ALDH3A2P51648 485 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 KRTAP10-11P60412 298 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 EMX1Q04741 257 aaPredicted RBP9.09□□□□□ -0.95
CPNE3-210ENST00000621245 GALEQ14376 348 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 KISS1Q15726 138 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 LTC4SQ16873 150 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 PIGYQ3MUY2 71 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 ETV3LQ6ZN32 361 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 OR4F17Q8NGA8 305 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 OR52I1Q8NGK6 324 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 TRUB1Q8WWH5 349 aaKnown RBP9.09□□□□□ -0.95
CPNE3-210ENST00000621245 SGCDQ92629 289 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 ORAI1Q96D31 301 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 KIRREL1Q96J84 757 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 RBM14Q96PK6 669 aaKnown RBP9.09□□□□□ -0.95
CPNE3-210ENST00000621245 OR4F4Q96R69 305 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 NR1H4Q96RI1 486 aaPredicted RBP9.09□□□□□ -0.95
CPNE3-210ENST00000621245 SLC29A1Q99808 456 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 GAL3ST2Q9H3Q3 398 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 NECAP2Q9NVZ3 263 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 ERVK13-1Q9NX77 482 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 TAS2R4Q9NYW5 299 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 KIF25Q9UIL4 384 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 STARD9Q9P2P6 4700 aa9.09□□□□□ -0.95
CPNE3-210ENST00000621245 A0A087X0M5 115 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 A0A1B0GX30 115 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 A0A1W2PPE3 182 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 A0A1W2PPI3 338 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 H0YJX3 145 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 K7EIL1 84 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 DEGS1O15121 323 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 SULT1B1O43704 296 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 XPNPEP2O43895 674 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 OR2F2O95006 317 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 CSN2P05814 226 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 HCKP08631 526 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 OCM2P0CE71 109 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 OCMP0CE72 109 aaPredicted RBP9.08□□□□□ -0.96
CPNE3-210ENST00000621245 TMEM225BP0DP42 221 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 SSTR5P35346 364 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 SOX2P48431 317 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 SMN1Q16637 294 aaKnown RBP9.08□□□□□ -0.96
CPNE3-210ENST00000621245 C9orf152Q5JTZ5 239 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 LCE2AQ5TA79 106 aaPredicted RBP9.08□□□□□ -0.96
CPNE3-210ENST00000621245 ZNF691Q5VV52 312 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 ZBTB49Q6ZSB9 765 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 KCTD20Q7Z5Y7 419 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 SAXO1Q8IYX7 474 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 OR51T1Q8NGJ9 327 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 OR13C5Q8NGS8 318 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 UBALD1Q8TB05 177 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 INPP5EQ9NRR6 644 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 GFOD1Q9NXC2 390 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 TAS2R3Q9NYW6 316 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 CALYQ9NYX4 217 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 GMPPBQ9Y5P6 360 aa9.08□□□□□ -0.96
CPNE3-210ENST00000621245 WI2-2373I1.2A0A1W2PRP0 233 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 TCRBV4S1A1TA0A5B7 111 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 LEUTXA8MZ59 168 aa9.07□□□□□ -0.96
CPNE3-210ENST00000621245 ATP5HO75947 161 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms