RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 GGHQ92820 318 aa13.78□□□□□ -0.2
HMGN3-203ENST00000620514 SMIM19Q96E16 107 aa13.78□□□□□ -0.2
HMGN3-203ENST00000620514 DPM3Q9P2X0 92 aa13.78□□□□□ -0.2
HMGN3-203ENST00000620514 ZNF281Q9Y2X9 895 aa13.78□□□□□ -0.2
HMGN3-203ENST00000620514 ZNF729A6NN14 1252 aaPredicted RBP13.77□□□□□ -0.21
HMGN3-203ENST00000620514 ALDOBP05062 364 aa13.77□□□□□ -0.21
HMGN3-203ENST00000620514 CGB3P0DN86 165 aa13.77□□□□□ -0.21
HMGN3-203ENST00000620514 CGB7P0DN87 165 aa13.77□□□□□ -0.21
HMGN3-203ENST00000620514 MYL12AP19105 171 aa13.77□□□□□ -0.21
HMGN3-203ENST00000620514 CD34P28906 385 aa13.77□□□□□ -0.21
HMGN3-203ENST00000620514 GLP1RP43220 463 aa13.77□□□□□ -0.21
HMGN3-203ENST00000620514 IL13RA2Q14627 380 aa13.77□□□□□ -0.21
HMGN3-203ENST00000620514 FBLN7Q53RD9 439 aa13.77□□□□□ -0.21
HMGN3-203ENST00000620514 LAIR2Q6ISS4 152 aa13.77□□□□□ -0.21
HMGN3-203ENST00000620514 C1QL4Q86Z23 238 aa13.77□□□□□ -0.21
HMGN3-203ENST00000620514 PACRGLQ8N7B6 248 aa13.77□□□□□ -0.21
HMGN3-203ENST00000620514 SETD9Q8NE22 299 aa13.77□□□□□ -0.21
HMGN3-203ENST00000620514 Q8NFD4 153 aa13.77□□□□□ -0.21
HMGN3-203ENST00000620514 OR4D6Q8NGJ1 314 aa13.77□□□□□ -0.21
HMGN3-203ENST00000620514 OR13A1Q8NGR1 328 aa13.77□□□□□ -0.21
HMGN3-203ENST00000620514 PLPPR1Q8TBJ4 325 aa13.77□□□□□ -0.21
HMGN3-203ENST00000620514 ZNF596Q8TC21 504 aa13.77□□□□□ -0.21
HMGN3-203ENST00000620514 CPNE2Q96FN4 548 aaPredicted RBP13.77□□□□□ -0.21
HMGN3-203ENST00000620514 TMEM80Q96HE8 168 aa13.77□□□□□ -0.21
HMGN3-203ENST00000620514 OR5M11Q96RB7 305 aa13.77□□□□□ -0.21
HMGN3-203ENST00000620514 PRSS22Q9GZN4 317 aa13.77□□□□□ -0.21
HMGN3-203ENST00000620514 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.77□□□□□ -0.21
HMGN3-203ENST00000620514 KIF25Q9UIL4 384 aa13.77□□□□□ -0.21
HMGN3-203ENST00000620514 ING4Q9UNL4 249 aa13.77□□□□□ -0.21
HMGN3-203ENST00000620514 MEIKINA0A087WXM9 373 aa13.76□□□□□ -0.21
HMGN3-203ENST00000620514 TRBV5-5A0A0J9YX44 114 aa13.76□□□□□ -0.21
HMGN3-203ENST00000620514 KBTBD11-OT1A0A1B0GTJ5 212 aa13.76□□□□□ -0.21
HMGN3-203ENST00000620514 GNAO1P09471 354 aa13.76□□□□□ -0.21
HMGN3-203ENST00000620514 CD28P10747 220 aa13.76□□□□□ -0.21
HMGN3-203ENST00000620514 NFYBP25208 207 aa13.76□□□□□ -0.21
HMGN3-203ENST00000620514 PPP3R1P63098 170 aa13.76□□□□□ -0.21
HMGN3-203ENST00000620514 HLA-DRB5Q30154 266 aa13.76□□□□□ -0.21
HMGN3-203ENST00000620514 TMEM95Q3KNT9 176 aa13.76□□□□□ -0.21
HMGN3-203ENST00000620514 DDI2Q5TDH0 399 aa13.76□□□□□ -0.21
HMGN3-203ENST00000620514 RSBN1Q5VWQ0 802 aaPredicted RBP13.76□□□□□ -0.21
HMGN3-203ENST00000620514 DMKNQ6E0U4 476 aaPredicted RBP13.76□□□□□ -0.21
HMGN3-203ENST00000620514 DTX3Q8N9I9 347 aa13.76□□□□□ -0.21
HMGN3-203ENST00000620514 ZNF485Q8NCK3 441 aa13.76□□□□□ -0.21
HMGN3-203ENST00000620514 OR52N1Q8NH53 320 aa13.76□□□□□ -0.21
HMGN3-203ENST00000620514 GHSRQ92847 366 aa13.76□□□□□ -0.21
HMGN3-203ENST00000620514 KIRREL1Q96J84 757 aa13.76□□□□□ -0.21
HMGN3-203ENST00000620514 TMEM138Q9NPI0 162 aa13.76□□□□□ -0.21
HMGN3-203ENST00000620514 OR6C3Q9NZP0 311 aa13.76□□□□□ -0.21
HMGN3-203ENST00000620514 A0A087X0M5 115 aa13.75□□□□□ -0.21
HMGN3-203ENST00000620514 TRAV39A0A0B4J263 110 aa13.75□□□□□ -0.21
HMGN3-203ENST00000620514 A0A1B0GX30 115 aa13.75□□□□□ -0.21
HMGN3-203ENST00000620514 MAGEA13PA6NCF6 341 aa13.75□□□□□ -0.21
HMGN3-203ENST00000620514 LEUTXA8MZ59 168 aa13.75□□□□□ -0.21
HMGN3-203ENST00000620514 BUB1B-PAK6H3BSN5 160 aa13.75□□□□□ -0.21
HMGN3-203ENST00000620514 TOR1AO14656 332 aa13.75□□□□□ -0.21
HMGN3-203ENST00000620514 IGHV3-7P01780 117 aa13.75□□□□□ -0.21
HMGN3-203ENST00000620514 IGFBP3P17936 291 aaPredicted RBP13.75□□□□□ -0.21
HMGN3-203ENST00000620514 BDKRB2P30411 391 aa13.75□□□□□ -0.21
HMGN3-203ENST00000620514 ZNF93P35789 620 aaPredicted RBP13.75□□□□□ -0.21
HMGN3-203ENST00000620514 RPS11P62280 158 aaKnown RBP eCLIP13.75□□□□□ -0.21
HMGN3-203ENST00000620514 ST3GAL4Q11206 333 aa13.75□□□□□ -0.21
HMGN3-203ENST00000620514 DOC2BQ14184 412 aa13.75□□□□□ -0.21
HMGN3-203ENST00000620514 TPTE2P1Q5T6R2 138 aa13.75□□□□□ -0.21
HMGN3-203ENST00000620514 WIPF2Q8TF74 440 aaPredicted RBP13.75□□□□□ -0.21
HMGN3-203ENST00000620514 LEAP2Q969E1 77 aa13.75□□□□□ -0.21
HMGN3-203ENST00000620514 PGLYRP3Q96LB9 341 aa13.75□□□□□ -0.21
HMGN3-203ENST00000620514 WNT10AQ9GZT5 417 aa13.75□□□□□ -0.21
HMGN3-203ENST00000620514 METTL9Q9H1A3 318 aa13.75□□□□□ -0.21
HMGN3-203ENST00000620514 C8orf4Q9NR00 106 aa13.75□□□□□ -0.21
HMGN3-203ENST00000620514 CHCHD3Q9NX63 227 aaKnown RBP13.75□□□□□ -0.21
HMGN3-203ENST00000620514 CALYQ9NYX4 217 aa13.75□□□□□ -0.21
HMGN3-203ENST00000620514 ST3GAL6Q9Y274 331 aa13.75□□□□□ -0.21
HMGN3-203ENST00000620514 A0A1W2PP11 408 aa13.74□□□□□ -0.21
HMGN3-203ENST00000620514 ANKRD65E5RJM6 399 aa13.74□□□□□ -0.21
HMGN3-203ENST00000620514 LY6LH3BQJ8 138 aa13.74□□□□□ -0.21
HMGN3-203ENST00000620514 XPNPEP2O43895 674 aa13.74□□□□□ -0.21
HMGN3-203ENST00000620514 FBXO24O75426 580 aa13.74□□□□□ -0.21
HMGN3-203ENST00000620514 CAPGP40121 348 aa13.74□□□□□ -0.21
HMGN3-203ENST00000620514 RIPK1Q13546 671 aa13.74□□□□□ -0.21
HMGN3-203ENST00000620514 RBM39Q14498 530 aaKnown RBP13.74□□□□□ -0.21
HMGN3-203ENST00000620514 LTC4SQ16873 150 aa13.74□□□□□ -0.21
HMGN3-203ENST00000620514 NSUN5P1Q3KNT7 163 aa13.74□□□□□ -0.21
HMGN3-203ENST00000620514 ARSJQ5FYB0 599 aaPredicted RBP13.74□□□□□ -0.21
HMGN3-203ENST00000620514 OSR2Q8N2R0 312 aa13.74□□□□□ -0.21
HMGN3-203ENST00000620514 SUMF2Q8NBJ7 301 aa13.74□□□□□ -0.21
HMGN3-203ENST00000620514 RFESDQ8TAC1 157 aa13.74□□□□□ -0.21
HMGN3-203ENST00000620514 MRGPRDQ8TDS7 321 aa13.74□□□□□ -0.21
HMGN3-203ENST00000620514 DPCDQ9BVM2 203 aaPredicted RBP13.74□□□□□ -0.21
HMGN3-203ENST00000620514 BARHL1Q9BZE3 327 aa13.74□□□□□ -0.21
HMGN3-203ENST00000620514 NCOR1P1Q9H4R4 102 aa13.74□□□□□ -0.21
HMGN3-203ENST00000620514 IL36GQ9NZH8 169 aa13.74□□□□□ -0.21
HMGN3-203ENST00000620514 TRAV8-7A0A075B6U6 113 aa13.73□□□□□ -0.21
HMGN3-203ENST00000620514 PNMA8CA0A1B0GUJ8 204 aa13.73□□□□□ -0.21
HMGN3-203ENST00000620514 A0A1W2PPK0 400 aa13.73□□□□□ -0.21
HMGN3-203ENST00000620514 GEMIN2O14893 280 aaKnown RBP13.73□□□□□ -0.21
HMGN3-203ENST00000620514 SERPINA2P20848 420 aa13.73□□□□□ -0.21
HMGN3-203ENST00000620514 BRS3P32247 399 aa13.73□□□□□ -0.21
HMGN3-203ENST00000620514 VDAC2P45880 294 aaPredicted RBP13.73□□□□□ -0.21
HMGN3-203ENST00000620514 PRRX1P54821 245 aa13.73□□□□□ -0.21
HMGN3-203ENST00000620514 RBM11P57052 281 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms