RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 AKR1E2Q96JD6 320 aa17.61■□□□□ 0.41
SRRT-218ENST00000620394 NCOR1P1Q9H4R4 102 aa17.61■□□□□ 0.41
SRRT-218ENST00000620394 FAM118AQ9NWS6 357 aa17.61■□□□□ 0.41
SRRT-218ENST00000620394 OR6C3Q9NZP0 311 aa17.61■□□□□ 0.41
SRRT-218ENST00000620394 FAM172BPA6NC97 362 aa17.6■□□□□ 0.41
SRRT-218ENST00000620394 LY6LH3BQJ8 138 aa17.6■□□□□ 0.41
SRRT-218ENST00000620394 H3BUI4 141 aa17.6■□□□□ 0.41
SRRT-218ENST00000620394 DEGS1O15121 323 aa17.6■□□□□ 0.41
SRRT-218ENST00000620394 CGB3P0DN86 165 aa17.6■□□□□ 0.41
SRRT-218ENST00000620394 CGB7P0DN87 165 aa17.6■□□□□ 0.41
SRRT-218ENST00000620394 BRS3P32247 399 aa17.6■□□□□ 0.41
SRRT-218ENST00000620394 ARHGDIBP52566 201 aa17.6■□□□□ 0.41
SRRT-218ENST00000620394 GBX2P52951 348 aaPredicted RBP17.6■□□□□ 0.41
SRRT-218ENST00000620394 SCN1BQ07699 218 aa17.6■□□□□ 0.41
SRRT-218ENST00000620394 IL13RA2Q14627 380 aa17.6■□□□□ 0.41
SRRT-218ENST00000620394 WFDC9Q8NEX5 89 aa17.6■□□□□ 0.41
SRRT-218ENST00000620394 OR4D6Q8NGJ1 314 aa17.6■□□□□ 0.41
SRRT-218ENST00000620394 LINC00574Q9H8X3 128 aa17.6■□□□□ 0.41
SRRT-218ENST00000620394 FGF20Q9NP95 211 aaPredicted RBP17.6■□□□□ 0.41
SRRT-218ENST00000620394 TRAV24A0A0B4J272 114 aa17.59■□□□□ 0.41
SRRT-218ENST00000620394 KBTBD11-OT1A0A1B0GTJ5 212 aa17.59■□□□□ 0.41
SRRT-218ENST00000620394 OOSP1A8MZH6 123 aa17.59■□□□□ 0.41
SRRT-218ENST00000620394 H0YJX3 145 aa17.59■□□□□ 0.41
SRRT-218ENST00000620394 BUB1B-PAK6H3BSN5 160 aa17.59■□□□□ 0.41
SRRT-218ENST00000620394 GABRPO00591 440 aa17.59■□□□□ 0.41
SRRT-218ENST00000620394 WBP4O75554 376 aaKnown RBP17.59■□□□□ 0.41
SRRT-218ENST00000620394 IGLL1P15814 213 aa17.59■□□□□ 0.41
SRRT-218ENST00000620394 RAB3AP20336 220 aa17.59■□□□□ 0.41
SRRT-218ENST00000620394 CEACAM3P40198 252 aa17.59■□□□□ 0.41
SRRT-218ENST00000620394 KLHL22Q53GT1 634 aa17.59■□□□□ 0.41
SRRT-218ENST00000620394 TPTE2P1Q5T6R2 138 aa17.59■□□□□ 0.41
SRRT-218ENST00000620394 LPCAT4Q643R3 524 aa17.59■□□□□ 0.41
SRRT-218ENST00000620394 OR51A2Q8NGJ7 313 aa17.59■□□□□ 0.41
SRRT-218ENST00000620394 KIRREL1Q96J84 757 aa17.59■□□□□ 0.41
SRRT-218ENST00000620394 WWC2-AS2Q96NR7 200 aa17.59■□□□□ 0.41
SRRT-218ENST00000620394 RDH12Q96NR8 316 aa17.59■□□□□ 0.41
SRRT-218ENST00000620394 OR5M11Q96RB7 305 aa17.59■□□□□ 0.41
SRRT-218ENST00000620394 OR2F2O95006 317 aa17.58■□□□□ 0.4
SRRT-218ENST00000620394 CD83Q01151 205 aa17.58■□□□□ 0.4
SRRT-218ENST00000620394 CCDC58Q4VC31 144 aa17.58■□□□□ 0.4
SRRT-218ENST00000620394 ARSJQ5FYB0 599 aaPredicted RBP17.58■□□□□ 0.4
SRRT-218ENST00000620394 UTF1Q5T230 341 aa17.58■□□□□ 0.4
SRRT-218ENST00000620394 ASCL4Q6XD76 172 aa17.58■□□□□ 0.4
SRRT-218ENST00000620394 RBM14Q96PK6 669 aaKnown RBP17.58■□□□□ 0.4
SRRT-218ENST00000620394 SLC25A33Q9BSK2 321 aa17.58■□□□□ 0.4
SRRT-218ENST00000620394 CD24P25063 80 aa17.57■□□□□ 0.4
SRRT-218ENST00000620394 KCNJ3P48549 501 aa17.57■□□□□ 0.4
SRRT-218ENST00000620394 GTF2A1P52655 376 aaPredicted RBP17.57■□□□□ 0.4
SRRT-218ENST00000620394 SLC35A2P78381 396 aa17.57■□□□□ 0.4
SRRT-218ENST00000620394 ZSCAN26Q16670 478 aa17.57■□□□□ 0.4
SRRT-218ENST00000620394 PAN3Q58A45 887 aaKnown RBP17.57■□□□□ 0.4
SRRT-218ENST00000620394 XAF1Q6GPH4 301 aa17.57■□□□□ 0.4
SRRT-218ENST00000620394 CCDC144NLQ6NUI1 221 aa17.57■□□□□ 0.4
SRRT-218ENST00000620394 RPL22L1Q6P5R6 122 aaKnown RBP17.57■□□□□ 0.4
SRRT-218ENST00000620394 OR13A1Q8NGR1 328 aa17.57■□□□□ 0.4
SRRT-218ENST00000620394 OR9G1Q8NH87 305 aa17.57■□□□□ 0.4
SRRT-218ENST00000620394 CNIH3Q8TBE1 160 aa17.57■□□□□ 0.4
SRRT-218ENST00000620394 TNFAIP8L1Q8WVP5 186 aa17.57■□□□□ 0.4
SRRT-218ENST00000620394 TAS2R4Q9NYW5 299 aa17.57■□□□□ 0.4
SRRT-218ENST00000620394 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.57■□□□□ 0.4
SRRT-218ENST00000620394 KIF25Q9UIL4 384 aa17.57■□□□□ 0.4
SRRT-218ENST00000620394 COL7A1Q02388 2944 aa17.56■□□□□ 0.4
SRRT-218ENST00000620394 TOR1AO14656 332 aa17.56■□□□□ 0.4
SRRT-218ENST00000620394 AMY1AP04745 511 aa17.56■□□□□ 0.4
SRRT-218ENST00000620394 AMY2AP04746 511 aa17.56■□□□□ 0.4
SRRT-218ENST00000620394 PF4V1P10720 104 aa17.56■□□□□ 0.4
SRRT-218ENST00000620394 GLP1RP43220 463 aa17.56■□□□□ 0.4
SRRT-218ENST00000620394 PRRX1P54821 245 aa17.56■□□□□ 0.4
SRRT-218ENST00000620394 SMN1Q16637 294 aaKnown RBP17.56■□□□□ 0.4
SRRT-218ENST00000620394 NHLRC3Q5JS37 347 aa17.56■□□□□ 0.4
SRRT-218ENST00000620394 RSBN1Q5VWQ0 802 aaPredicted RBP17.56■□□□□ 0.4
SRRT-218ENST00000620394 GPR148Q8TDV2 347 aa17.56■□□□□ 0.4
SRRT-218ENST00000620394 IFT22Q9H7X7 185 aa17.56■□□□□ 0.4
SRRT-218ENST00000620394 ING3Q9NXR8 418 aa17.56■□□□□ 0.4
SRRT-218ENST00000620394 SMPD3Q9NY59 655 aaPredicted RBP17.56■□□□□ 0.4
SRRT-218ENST00000620394 CALYQ9NYX4 217 aa17.56■□□□□ 0.4
SRRT-218ENST00000620394 IL36GQ9NZH8 169 aa17.56■□□□□ 0.4
SRRT-218ENST00000620394 NPIPB11E5RHQ5 1161 aa17.55■□□□□ 0.4
SRRT-218ENST00000620394 HSPB6O14558 160 aa17.55■□□□□ 0.4
SRRT-218ENST00000620394 MAGEB3O15480 346 aa17.55■□□□□ 0.4
SRRT-218ENST00000620394 IL1AP01583 271 aa17.55■□□□□ 0.4
SRRT-218ENST00000620394 CD2P06729 351 aa17.55■□□□□ 0.4
SRRT-218ENST00000620394 DCKP27707 260 aa17.55■□□□□ 0.4
SRRT-218ENST00000620394 SOX2P48431 317 aa17.55■□□□□ 0.4
SRRT-218ENST00000620394 ZNF565Q8N9K5 539 aa17.55■□□□□ 0.4
SRRT-218ENST00000620394 OR5AU1Q8NGC0 362 aa17.55■□□□□ 0.4
SRRT-218ENST00000620394 TMEM106AQ96A25 262 aa17.55■□□□□ 0.4
SRRT-218ENST00000620394 RCC1LQ96I51 464 aaKnown RBP17.55■□□□□ 0.4
SRRT-218ENST00000620394 GPER1Q99527 375 aa17.55■□□□□ 0.4
SRRT-218ENST00000620394 PCDHB16Q9NRJ7 776 aa17.55■□□□□ 0.4
SRRT-218ENST00000620394 MEIKINA0A087WXM9 373 aa17.54■□□□□ 0.4
SRRT-218ENST00000620394 FAM90A18PA6NE21 464 aa17.54■□□□□ 0.4
SRRT-218ENST00000620394 FAM90A16PA6NEW6 464 aa17.54■□□□□ 0.4
SRRT-218ENST00000620394 FAM90A20PA6NIJ5 464 aa17.54■□□□□ 0.4
SRRT-218ENST00000620394 FAM90A9PA6NNJ1 464 aa17.54■□□□□ 0.4
SRRT-218ENST00000620394 FAM90A12PA8MX19 464 aa17.54■□□□□ 0.4
SRRT-218ENST00000620394 FAM90A5PA8MXJ8 464 aa17.54■□□□□ 0.4
SRRT-218ENST00000620394 M0QZK8 103 aa17.54■□□□□ 0.4
SRRT-218ENST00000620394 DUS4LO95620 317 aaKnown RBP17.54■□□□□ 0.4
SRRT-218ENST00000620394 FAM90A15PP0C7V4 464 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms