RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 F8VWA3 439 aa16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 LPAR6P43657 344 aa16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 RRADP55042 308 aa16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 PLCXD3Q63HM9 321 aa16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 NBEAQ8NFP9 2946 aa16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 GPR61Q9BZJ8 451 aa16.72■□□□□ 0.27
LAPTM4B-204ENST00000619747 DMXL2Q8TDJ6 3036 aa16.71■□□□□ 0.27
LAPTM4B-204ENST00000619747 NGFP01138 241 aa16.71■□□□□ 0.27
LAPTM4B-204ENST00000619747 OR3A2P47893 321 aa16.71■□□□□ 0.27
LAPTM4B-204ENST00000619747 TNFRSF9Q07011 255 aa16.71■□□□□ 0.27
LAPTM4B-204ENST00000619747 PPA1Q15181 289 aa16.71■□□□□ 0.27
LAPTM4B-204ENST00000619747 PIGYQ3MUY2 71 aa16.71■□□□□ 0.27
LAPTM4B-204ENST00000619747 FAM89BQ8N5H3 189 aa16.71■□□□□ 0.27
LAPTM4B-204ENST00000619747 CYTL1Q9NRR1 136 aa16.71■□□□□ 0.27
LAPTM4B-204ENST00000619747 CRIM1Q9NZV1 1036 aa16.71■□□□□ 0.27
LAPTM4B-204ENST00000619747 SHANK1Q9Y566 2161 aa16.71■□□□□ 0.27
LAPTM4B-204ENST00000619747 ZNF850A8MQ14 1090 aa16.71■□□□□ 0.26
LAPTM4B-204ENST00000619747 FAM157AC9JC47 383 aa16.71■□□□□ 0.26
LAPTM4B-204ENST00000619747 SERPINA5P05154 406 aa16.71■□□□□ 0.26
LAPTM4B-204ENST00000619747 PIP4P1Q86T03 277 aa16.71■□□□□ 0.26
LAPTM4B-204ENST00000619747 OR5H2Q8NGV7 314 aa16.71■□□□□ 0.26
LAPTM4B-204ENST00000619747 TMEM45BQ96B21 275 aa16.71■□□□□ 0.26
LAPTM4B-204ENST00000619747 TUBA4BQ9H853 241 aa16.71■□□□□ 0.26
LAPTM4B-204ENST00000619747 SPRR3Q9UBC9 169 aa16.71■□□□□ 0.26
LAPTM4B-204ENST00000619747 ZNF107Q9UII5 783 aaPredicted RBP16.71■□□□□ 0.26
LAPTM4B-204ENST00000619747 IGKV1-12A0A0C4DH73 117 aa16.7■□□□□ 0.26
LAPTM4B-204ENST00000619747 IGKV1D-12P01611 117 aa16.7■□□□□ 0.26
LAPTM4B-204ENST00000619747 OPRM1P35372 400 aa16.7■□□□□ 0.26
LAPTM4B-204ENST00000619747 RAB1AP62820 205 aa16.7■□□□□ 0.26
LAPTM4B-204ENST00000619747 HIKESHIQ53FT3 197 aa16.7■□□□□ 0.26
LAPTM4B-204ENST00000619747 SPNS3Q6ZMD2 512 aa16.7■□□□□ 0.26
LAPTM4B-204ENST00000619747 FDCSPQ8NFU4 85 aa16.7■□□□□ 0.26
LAPTM4B-204ENST00000619747 DCUN1D4Q92564 292 aa16.7■□□□□ 0.26
LAPTM4B-204ENST00000619747 MALSU1Q96EH3 234 aa16.7■□□□□ 0.26
LAPTM4B-204ENST00000619747 ATMQ13315 3056 aa16.7■□□□□ 0.26
LAPTM4B-204ENST00000619747 hCG_38984A0A1B0GV85 526 aa16.7■□□□□ 0.26
LAPTM4B-204ENST00000619747 A0A1W2PR80 420 aa16.7■□□□□ 0.26
LAPTM4B-204ENST00000619747 SFTPBP07988 381 aa16.7■□□□□ 0.26
LAPTM4B-204ENST00000619747 SULT1A1P50225 295 aa16.7■□□□□ 0.26
LAPTM4B-204ENST00000619747 RPP30P78346 268 aaKnown RBP16.7■□□□□ 0.26
LAPTM4B-204ENST00000619747 NHLH2Q02577 135 aa16.7■□□□□ 0.26
LAPTM4B-204ENST00000619747 FAM219AQ8IW50 185 aa16.7■□□□□ 0.26
LAPTM4B-204ENST00000619747 ZFP62Q8NB50 900 aaPredicted RBP16.7■□□□□ 0.26
LAPTM4B-204ENST00000619747 TERB2Q8NHR7 220 aa16.7■□□□□ 0.26
LAPTM4B-204ENST00000619747 EHFQ9NZC4 300 aa16.7■□□□□ 0.26
LAPTM4B-204ENST00000619747 GEMIN2O14893 280 aaKnown RBP16.69■□□□□ 0.26
LAPTM4B-204ENST00000619747 FCGR3AP08637 254 aa16.69■□□□□ 0.26
LAPTM4B-204ENST00000619747 BPIFB3P59826 476 aa16.69■□□□□ 0.26
LAPTM4B-204ENST00000619747 SLC25A42Q86VD7 318 aa16.69■□□□□ 0.26
LAPTM4B-204ENST00000619747 CALHM1Q8IU99 346 aa16.69■□□□□ 0.26
LAPTM4B-204ENST00000619747 GCNT2Q8N0V5 402 aa16.69■□□□□ 0.26
LAPTM4B-204ENST00000619747 OR10J5Q8NHC4 309 aa16.69■□□□□ 0.26
LAPTM4B-204ENST00000619747 RGCCQ9H4X1 137 aa16.69■□□□□ 0.26
LAPTM4B-204ENST00000619747 SLC2A8Q9NY64 477 aa16.69■□□□□ 0.26
LAPTM4B-204ENST00000619747 TRGV5A0A0B4J1U4 118 aa16.69■□□□□ 0.26
LAPTM4B-204ENST00000619747 EREGO14944 169 aa16.69■□□□□ 0.26
LAPTM4B-204ENST00000619747 EFSO43281 561 aa16.69■□□□□ 0.26
LAPTM4B-204ENST00000619747 ZBTB25P24278 435 aa16.69■□□□□ 0.26
LAPTM4B-204ENST00000619747 DTD1Q8TEA8 209 aa16.69■□□□□ 0.26
LAPTM4B-204ENST00000619747 RRNAD1Q96FB5 475 aaKnown RBP16.69■□□□□ 0.26
LAPTM4B-204ENST00000619747 KPTNQ9Y664 436 aa16.69■□□□□ 0.26
LAPTM4B-204ENST00000619747 C3orf80F5H4A9 247 aa16.68■□□□□ 0.26
LAPTM4B-204ENST00000619747 ALDH3B1P43353 468 aa16.68■□□□□ 0.26
LAPTM4B-204ENST00000619747 SLC9A3R2Q15599 337 aa16.68■□□□□ 0.26
LAPTM4B-204ENST00000619747 LYG2Q86SG7 212 aa16.68■□□□□ 0.26
LAPTM4B-204ENST00000619747 FBXL14Q8N1E6 418 aa16.68■□□□□ 0.26
LAPTM4B-204ENST00000619747 OR56B2PQ8NGI1 322 aa16.68■□□□□ 0.26
LAPTM4B-204ENST00000619747 RIMS4Q9H426 269 aaPredicted RBP16.68■□□□□ 0.26
LAPTM4B-204ENST00000619747 SIRT7Q9NRC8 400 aa16.68■□□□□ 0.26
LAPTM4B-204ENST00000619747 PIEZO2Q9H5I5 2752 aa16.68■□□□□ 0.26
LAPTM4B-204ENST00000619747 C13orf42A0A1B0GVH6 325 aa16.68■□□□□ 0.26
LAPTM4B-204ENST00000619747 FBXO24O75426 580 aa16.68■□□□□ 0.26
LAPTM4B-204ENST00000619747 CNN3Q15417 329 aaKnown RBP16.68■□□□□ 0.26
LAPTM4B-204ENST00000619747 KHDC3LQ587J8 217 aa16.68■□□□□ 0.26
LAPTM4B-204ENST00000619747 OR51F2Q8NH61 342 aa16.68■□□□□ 0.26
LAPTM4B-204ENST00000619747 SPSB1Q96BD6 273 aa16.68■□□□□ 0.26
LAPTM4B-204ENST00000619747 C10orf35Q96D05 121 aa16.68■□□□□ 0.26
LAPTM4B-204ENST00000619747 NUDT16L1Q9BRJ7 211 aaKnown RBP16.68■□□□□ 0.26
LAPTM4B-204ENST00000619747 OPN3Q9H1Y3 402 aaPredicted RBP16.68■□□□□ 0.26
LAPTM4B-204ENST00000619747 BCO1Q9HAY6 547 aa16.68■□□□□ 0.26
LAPTM4B-204ENST00000619747 DHRS7CA6NNS2 312 aa16.67■□□□□ 0.26
LAPTM4B-204ENST00000619747 SOD3P08294 240 aa16.67■□□□□ 0.26
LAPTM4B-204ENST00000619747 ZNF25P17030 456 aaPredicted RBP16.67■□□□□ 0.26
LAPTM4B-204ENST00000619747 SRSF4Q08170 494 aaKnown RBP16.67■□□□□ 0.26
LAPTM4B-204ENST00000619747 IGFBP7Q16270 282 aa16.67■□□□□ 0.26
LAPTM4B-204ENST00000619747 ZNF585AQ6P3V2 769 aa16.67■□□□□ 0.26
LAPTM4B-204ENST00000619747 Q6ZSR3 168 aa16.67■□□□□ 0.26
LAPTM4B-204ENST00000619747 PRR18Q8N4B5 295 aa16.67■□□□□ 0.26
LAPTM4B-204ENST00000619747 Q96M66 194 aa16.67■□□□□ 0.26
LAPTM4B-204ENST00000619747 C5orf66Q9H5L9 145 aa16.67■□□□□ 0.26
LAPTM4B-204ENST00000619747 KCNIP3Q9Y2W7 256 aa16.67■□□□□ 0.26
LAPTM4B-204ENST00000619747 CUL9Q8IWT3 2517 aa16.67■□□□□ 0.26
LAPTM4B-204ENST00000619747 TNRC6AQ8NDV7 1962 aaKnown RBP16.67■□□□□ 0.26
LAPTM4B-204ENST00000619747 FOXI3A8MTJ6 420 aaPredicted RBP16.67■□□□□ 0.26
LAPTM4B-204ENST00000619747 PHOX2AO14813 284 aa16.67■□□□□ 0.26
LAPTM4B-204ENST00000619747 GLRA1P23415 457 aa16.67■□□□□ 0.26
LAPTM4B-204ENST00000619747 NPBWR2P48146 333 aa16.67■□□□□ 0.26
LAPTM4B-204ENST00000619747 SOX8P57073 446 aa16.67■□□□□ 0.26
LAPTM4B-204ENST00000619747 KRTAP27-1Q3LI81 207 aa16.67■□□□□ 0.26
LAPTM4B-204ENST00000619747 CHRFAM7AQ494W8 412 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms