RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 HEXA-AS1Q9H8Q6 139 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 PCDHB16Q9NRJ7 776 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 NDUFB11Q9NX14 153 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 TAS2R3Q9NYW6 316 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 ZNF581Q9P0T4 197 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 ZNRD1Q9P1U0 126 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 ST3GAL6Q9Y274 331 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 POMT1Q9Y6A1 747 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 hCG_1809904A0A1W2PP81 198 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 A0A1W2PPE2 198 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 A0A1W2PR64 198 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 A0A1W2PRV1 198 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 ODAMA1E959 279 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 FUOMA2VDF0 154 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 NPIPB11E5RHQ5 1161 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 GEMIN2O14893 280 aaKnown RBP6.71□□□□□ -1.34
NEK3-209ENST00000618856 HOXA3O43365 443 aaPredicted RBP6.71□□□□□ -1.34
NEK3-209ENST00000618856 RGS9O75916 674 aaPredicted RBP6.71□□□□□ -1.34
NEK3-209ENST00000618856 HTR3BO95264 441 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 MAS1P04201 325 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 GLAP06280 429 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 UBBP0CG47 229 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 HSMCR30P0CW71 290 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 GTF2F2P13984 249 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 ZNF44P15621 663 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 CD34P28906 385 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 SAA4P35542 130 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 GLIPR1P48060 266 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 SNU13P55769 128 aaKnown RBP6.71□□□□□ -1.34
NEK3-209ENST00000618856 EDDM3BP56851 147 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 RPL15P61313 204 aaKnown RBP6.71□□□□□ -1.34
NEK3-209ENST00000618856 PRB3Q04118 309 aaPredicted RBP6.71□□□□□ -1.34
NEK3-209ENST00000618856 KCTD21Q4G0X4 260 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 HSD17B12Q53GQ0 312 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 LDLRAD2Q5SZI1 272 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 ZNF626Q68DY1 528 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 ZNF773Q6PK81 442 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 GLIPR1L1Q6UWM5 242 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 HEPN1Q6WQI6 88 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 PNKDQ8N490 385 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 TPRX1Q8N7U7 411 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 SUMF2Q8NBJ7 301 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 BEND2Q8NDZ0 799 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 TMEM104Q8NE00 496 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 FCGR1BQ92637 280 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 TMEM203Q969S6 136 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 Q96M66 194 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 DPCDQ9BVM2 203 aaPredicted RBP6.71□□□□□ -1.34
NEK3-209ENST00000618856 FAM192AQ9GZU8 254 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 PPA2Q9H2U2 334 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 TCF7L1Q9HCS4 588 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 FBLN5Q9UBX5 448 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 ING4Q9UNL4 249 aa6.71□□□□□ -1.34
NEK3-209ENST00000618856 MRPS28Q9Y2Q9 187 aaKnown RBP6.71□□□□□ -1.34
NEK3-209ENST00000618856 TRAV1-2A0A0B4J238 106 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 TRDV1A0A1B0GX56 115 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 SHISA3A0PJX4 238 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 ZNF729A6NN14 1252 aaPredicted RBP6.7□□□□□ -1.34
NEK3-209ENST00000618856 FOXI3A8MTJ6 420 aaPredicted RBP6.7□□□□□ -1.34
NEK3-209ENST00000618856 VGLL3A8MV65 326 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 TMEM14DPA8MWL7 114 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 MMP23AO75900 390 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 ARL6IP5O75915 188 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 CLPXO76031 633 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 IGLV1-47P01700 117 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 CSTBP04080 98 aaKnown RBP6.7□□□□□ -1.34
NEK3-209ENST00000618856 FBP1P09467 338 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 HKR1P10072 659 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 SERPINA2P20848 420 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 EEF1B2P24534 225 aaKnown RBP6.7□□□□□ -1.34
NEK3-209ENST00000618856 FGF9P31371 208 aaPredicted RBP6.7□□□□□ -1.34
NEK3-209ENST00000618856 EDDM3AQ14507 147 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 ATXN7L3Q14CW9 347 aaPredicted RBP6.7□□□□□ -1.34
NEK3-209ENST00000618856 C17orf58Q2M2W7 97 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 SLC22A6Q4U2R8 563 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 KRBOX4Q5JUW0 171 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 SYT6Q5T7P8 510 aaPredicted RBP6.7□□□□□ -1.34
NEK3-209ENST00000618856 GLT8D1Q68CQ7 371 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 SIGIRRQ6IA17 410 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 SLC35E4Q6ICL7 350 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 C16orf87Q6PH81 154 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 PDZD9Q8IXQ8 264 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 SVOPQ8N4V2 548 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 JAGN1Q8N5M9 183 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 OR6M1Q8NGM8 313 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 PLPPR1Q8TBJ4 325 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 PIFOQ8TCI5 191 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 C17orf50Q8WW18 174 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 SSMEM1Q8WWF3 244 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 NR1H4Q96RI1 486 aaPredicted RBP6.7□□□□□ -1.34
NEK3-209ENST00000618856 TM2D1Q9BX74 207 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 BARHL1Q9BZE3 327 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 TMEM133Q9H2Q1 129 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 GAL3ST2Q9H3Q3 398 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 SPACA1Q9HBV2 294 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 OR6C3Q9NZP0 311 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 TBL2Q9Y4P3 447 aaKnown RBP6.7□□□□□ -1.34
NEK3-209ENST00000618856 SESN1Q9Y6P5 492 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 TRRAPQ9Y4A5 3859 aa6.7□□□□□ -1.34
NEK3-209ENST00000618856 TRGV10A0A0A0MS01 117 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms