RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 EAF1Q96JC9 268 aaPredicted RBP9.42□□□□□ -0.9
POLR2A-209ENST00000617998 WSB1Q9Y6I7 421 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 AKAP6Q13023 2319 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 M0QYG6 137 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 MRPS14O60783 128 aaKnown RBP9.42□□□□□ -0.9
POLR2A-209ENST00000617998 IAPPP10997 89 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 HLA-DOBP13765 273 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 PPOXP50336 477 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 IZUMO4Q1ZYL8 232 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 TPRX1Q8N7U7 411 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 CITED4Q96RK1 184 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 SLC25A33Q9BSK2 321 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 ABHD14AQ9BUJ0 271 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 TLNRD1Q9H1K6 362 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 WASHC3Q9Y3C0 194 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 OR13C7P0DN81 318 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 GATA3P23771 443 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 LHX2P50458 406 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 IGFL3Q6UXB1 125 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 OR10A7Q8NGE5 316 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 TMEM45BQ96B21 275 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 SCMH1Q96GD3 660 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 PLA2G12AQ9BZM1 189 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 IDI2-AS1Q9NZ38 188 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 OR1A1Q9P1Q5 309 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 NEU3Q9UQ49 428 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 RAMP1O60894 148 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 SPP1P10451 314 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 NFAM1Q8NET5 270 aaPredicted RBP9.42□□□□□ -0.9
POLR2A-209ENST00000617998 EEF1AKMT3Q96AZ1 226 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 PRORYQ9H606 182 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 CCL27Q9Y4X3 112 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 RHBDL1O75783 438 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 PMELP40967 661 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 GALR1P47211 349 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 ZNF843Q8N446 348 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 MAP6Q96JE9 813 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 SSX3Q99909 188 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 TNFRSF12AQ9NP84 129 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 H3BMQ9 156 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 GPR31O00270 319 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 LALBAP00709 142 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 C10orf35Q96D05 121 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 SLC25A37Q9NYZ2 338 aa9.42□□□□□ -0.9
POLR2A-209ENST00000617998 DOCK8Q8NF50 2099 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 TMEM82A0PJX8 343 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 IGKV1D-16P01601 117 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 GCAP28676 217 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 PPP1CCP36873 323 aaKnown RBP9.41□□□□□ -0.9
POLR2A-209ENST00000617998 CLDN18P56856 261 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 MAB21L1Q13394 359 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 DNM1P46Q6ZS02 220 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 LSMEM1Q8N8F7 131 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 ARPC1BO15143 372 aaKnown RBP9.41□□□□□ -0.9
POLR2A-209ENST00000617998 EFEMP2O95967 443 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 CRYGSP22914 178 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 LRRC28Q86X40 367 aaPredicted RBP9.41□□□□□ -0.9
POLR2A-209ENST00000617998 OR10R2Q8NGX6 335 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 BPESC1Q9GZL8 116 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 CSAG2Q9Y5P2 127 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 NOTCH2Q04721 2471 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 IL11P20809 199 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 RPL27AP46776 148 aaKnown RBP9.41□□□□□ -0.9
POLR2A-209ENST00000617998 TMEM268Q5VZI3 342 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 STAC2Q6ZMT1 411 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 CALHM3Q86XJ0 350 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 CALHM1Q8IU99 346 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 KDF1Q8NAX2 398 aaPredicted RBP9.41□□□□□ -0.9
POLR2A-209ENST00000617998 ADAD2Q8NCV1 583 aaKnown RBP9.41□□□□□ -0.9
POLR2A-209ENST00000617998 MRAPQ8TCY5 172 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 DEPPQ9NTK1 212 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 SEMA5BQ9P283 1151 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 ST6GALNAC2Q9UJ37 374 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 SPTBN1Q01082 2364 aaKnown RBP9.41□□□□□ -0.9
POLR2A-209ENST00000617998 CACNA1CQ13936 2221 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 ST8SIA3O43173 380 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 RP2O75695 350 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 LIMS1P48059 325 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 TIGITQ495A1 244 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 ITPKCQ96DU7 683 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 DMRTB1Q96MA1 342 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 ZNF385DQ9H6B1 395 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 TMED3Q9Y3Q3 217 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 NUBP2Q9Y5Y2 271 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 PSMB11A5LHX3 300 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 K7EPK0 472 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 FBXO24O75426 580 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 MSMBP08118 114 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 ORM2P19652 201 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 EMP1P54849 157 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 SNRPD3P62318 126 aaKnown RBP9.41□□□□□ -0.9
POLR2A-209ENST00000617998 OR2F1Q13607 317 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 FAM71E2Q8N5Q1 922 aa9.41□□□□□ -0.9
POLR2A-209ENST00000617998 RBBP6Q7Z6E9 1792 aaKnown RBP9.4□□□□□ -0.9
POLR2A-209ENST00000617998 COX5BP10606 129 aa9.4□□□□□ -0.9
POLR2A-209ENST00000617998 MAGEB1P43366 347 aa9.4□□□□□ -0.9
POLR2A-209ENST00000617998 ZNF45Q02386 682 aa9.4□□□□□ -0.9
POLR2A-209ENST00000617998 KIAA1324LA8MWY0 1029 aaPredicted RBP9.4□□□□□ -0.9
POLR2A-209ENST00000617998 IL17RELQ6ZVW7 336 aa9.4□□□□□ -0.9
POLR2A-209ENST00000617998 BIVMQ86UB2 503 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms