RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 KRBOX4Q5JUW0 171 aa12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 UBE2NLQ5JXB2 153 aa12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 FAM185AQ8N0U4 392 aa12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 TMEM186Q96B77 213 aa12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 RAB3CQ96E17 227 aa12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 COQ2Q96H96 371 aa12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 ARHGAP5-AS1Q96IT6 56 aa12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 SULT4A1Q9BR01 284 aa12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 NUDT16L1Q9BRJ7 211 aaKnown RBP12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 PECRQ9BY49 303 aa12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 BATF3Q9NR55 127 aa12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 C19orf12Q9NSK7 152 aa12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 HIF1ANQ9NWT6 349 aa12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 ETAA1Q9NY74 926 aa12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 CR1P17927 2039 aa12.91□□□□□ -0.34
PCDHGC3-204ENST00000617222 TRBV23-1A0A0A0MS06 115 aa12.9□□□□□ -0.34
PCDHGC3-204ENST00000617222 TRAV20A0A0B4J274 112 aa12.9□□□□□ -0.34
PCDHGC3-204ENST00000617222 PPIAL4CA0A0B4J2A2 164 aa12.9□□□□□ -0.34
PCDHGC3-204ENST00000617222 KIR2DS1A0A191URI9 304 aa12.9□□□□□ -0.34
PCDHGC3-204ENST00000617222 MEX3AA1L020 520 aaKnown RBP12.9□□□□□ -0.34
PCDHGC3-204ENST00000617222 FUOMA2VDF0 154 aa12.9□□□□□ -0.34
PCDHGC3-204ENST00000617222 CTDSP2O14595 271 aa12.9□□□□□ -0.34
PCDHGC3-204ENST00000617222 ENSAO43768 121 aaKnown RBP12.9□□□□□ -0.34
PCDHGC3-204ENST00000617222 HPGDSO60760 199 aa12.9□□□□□ -0.34
PCDHGC3-204ENST00000617222 PPIAL4GP0DN37 164 aa12.9□□□□□ -0.34
PCDHGC3-204ENST00000617222 ERP29P30040 261 aaKnown RBP12.9□□□□□ -0.34
PCDHGC3-204ENST00000617222 P2RX3P56373 397 aa12.9□□□□□ -0.34
PCDHGC3-204ENST00000617222 RSBN1Q5VWQ0 802 aaPredicted RBP12.9□□□□□ -0.34
PCDHGC3-204ENST00000617222 TMEM200BQ69YZ2 307 aa12.9□□□□□ -0.34
PCDHGC3-204ENST00000617222 GLCCI1Q86VQ1 547 aa12.9□□□□□ -0.34
PCDHGC3-204ENST00000617222 DTX3Q8N9I9 347 aa12.9□□□□□ -0.34
PCDHGC3-204ENST00000617222 DYRK2Q92630 601 aa12.9□□□□□ -0.34
PCDHGC3-204ENST00000617222 S100A16Q96FQ6 103 aaKnown RBP12.9□□□□□ -0.34
PCDHGC3-204ENST00000617222 SMR3AQ99954 134 aa12.9□□□□□ -0.34
PCDHGC3-204ENST00000617222 SLIRPQ9GZT3 109 aaKnown RBP12.9□□□□□ -0.34
PCDHGC3-204ENST00000617222 ABCG5Q9H222 651 aa12.9□□□□□ -0.34
PCDHGC3-204ENST00000617222 HSF4Q9ULV5 492 aa12.9□□□□□ -0.34
PCDHGC3-204ENST00000617222 OTOGQ6ZRI0 2925 aa12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 CSPG4Q6UVK1 2322 aa12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 ACANP16112 2415 aa12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 ARHGAP32A7KAX9 2087 aa12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 A0A075B6Q4 140 aa12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 IGHV2-70DA0A0C4DH43 119 aa12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 A0A1W2PQ09 198 aa12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 EIF4EP06730 217 aaKnown RBP12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 DVL1P1P54792 670 aaPredicted RBP12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 KRTAP1-1Q07627 177 aa12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 SLC35E4Q6ICL7 350 aa12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 BTNL3Q6UXE8 466 aa12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 LY6G5BQ8NDX9 201 aa12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 MCFD2Q8NI22 146 aa12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 C8orf46Q8TAG6 207 aa12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 DACT3Q96B18 629 aaPredicted RBP12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 PHF21AQ96BD5 680 aa12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 CMTM3Q96MX0 182 aa12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 ZMAT3Q9HA38 289 aaKnown RBP12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 DIABLOQ9NR28 239 aa12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 KIF25Q9UIL4 384 aa12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 INSIG2Q9Y5U4 225 aa12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 VPS13CQ709C8 3753 aa12.89□□□□□ -0.35
PCDHGC3-204ENST00000617222 TRAV18A0A075B6X5 111 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 MEIKINA0A087WXM9 373 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 hADV38S2A0JD32 116 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 TMEM30CPA0ZSE6 113 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 ODAMA1E959 279 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 FAM25AB3EWG3 89 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 FAM25CB3EWG5 89 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 FAM25GB3EWG6 89 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 CD5LO43866 347 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 SCGNO76038 276 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 LY6G6DO95868 133 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 APOA1P02647 267 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 MT-ND4P03905 459 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 LIPFP07098 398 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 HIST1H1DP16402 221 aaKnown RBP12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 GNB3P16520 340 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 ELK1P19419 428 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 CDK2P24941 298 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 ARF6P62330 175 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 MEF2CQ06413 473 aaPredicted RBP12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 ZNF273Q14593 569 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 CDNFQ49AH0 187 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 DCAF12L2Q5VW00 463 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 OLFML2AQ68BL7 652 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 FAHD2BQ6P2I3 314 aaPredicted RBP12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 ZNF497Q6ZNH5 498 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 IZUMO1Q8IYV9 350 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 CCDC107Q8WV48 283 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 FAHD2AQ96GK7 314 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 C6orf62Q9GZU0 229 aaPredicted RBP12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 NXF2Q9GZY0 626 aaKnown RBP12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 AK3Q9UIJ7 227 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 KCNK7Q9Y2U2 307 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 ABCA1O95477 2261 aa12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 FLNAP21333 2647 aaKnown RBP12.88□□□□□ -0.35
PCDHGC3-204ENST00000617222 A0A0A6YYH2 397 aa12.87□□□□□ -0.35
PCDHGC3-204ENST00000617222 TRAV39A0A0B4J263 110 aa12.87□□□□□ -0.35
PCDHGC3-204ENST00000617222 A6NJ64 397 aa12.87□□□□□ -0.35
PCDHGC3-204ENST00000617222 RGS5O15539 181 aa12.87□□□□□ -0.35
PCDHGC3-204ENST00000617222 PAX5Q02548 391 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms