RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 DUX4L3P0CJ86 424 aa12.65□□□□□ -0.38
CBWD1-225ENST00000616944 DUX4L4P0CJ87 422 aa12.65□□□□□ -0.38
CBWD1-225ENST00000616944 DUX4L5P0CJ88 424 aa12.65□□□□□ -0.38
CBWD1-225ENST00000616944 DUX4L6P0CJ89 424 aa12.65□□□□□ -0.38
CBWD1-225ENST00000616944 DUX4L7P0CJ90 424 aa12.65□□□□□ -0.38
CBWD1-225ENST00000616944 NAT1P18440 290 aa12.65□□□□□ -0.38
CBWD1-225ENST00000616944 DTYMKP23919 212 aa12.65□□□□□ -0.38
CBWD1-225ENST00000616944 MDH2P40926 338 aaKnown RBP12.65□□□□□ -0.38
CBWD1-225ENST00000616944 GABRA2P47869 451 aa12.65□□□□□ -0.38
CBWD1-225ENST00000616944 KCNJ3P48549 501 aa12.65□□□□□ -0.38
CBWD1-225ENST00000616944 DUX4L9Q6RFH8 374 aaPredicted RBP12.65□□□□□ -0.38
CBWD1-225ENST00000616944 ZNF497Q6ZNH5 498 aa12.65□□□□□ -0.38
CBWD1-225ENST00000616944 ZNF561Q8N587 486 aa12.65□□□□□ -0.38
CBWD1-225ENST00000616944 ZNRF1Q8ND25 227 aa12.65□□□□□ -0.38
CBWD1-225ENST00000616944 SNAPC3Q92966 411 aa12.65□□□□□ -0.38
CBWD1-225ENST00000616944 TMEM246Q9BRR3 403 aa12.65□□□□□ -0.38
CBWD1-225ENST00000616944 CHST6Q9GZX3 395 aa12.65□□□□□ -0.38
CBWD1-225ENST00000616944 ZNF665Q9H7R5 613 aa12.65□□□□□ -0.38
CBWD1-225ENST00000616944 ETAA1Q9NY74 926 aa12.65□□□□□ -0.38
CBWD1-225ENST00000616944 KAAG1Q9UBP8 84 aa12.65□□□□□ -0.38
CBWD1-225ENST00000616944 DUX4Q9UBX2 424 aa12.65□□□□□ -0.38
CBWD1-225ENST00000616944 ZNF107Q9UII5 783 aaPredicted RBP12.65□□□□□ -0.38
CBWD1-225ENST00000616944 SETXQ7Z333 2677 aaKnown RBP12.64□□□□□ -0.39
CBWD1-225ENST00000616944 TRBV6-6A0A0A6YYG2 114 aa12.64□□□□□ -0.39
CBWD1-225ENST00000616944 ISPDA4D126 451 aa12.64□□□□□ -0.39
CBWD1-225ENST00000616944 FCN3O75636 299 aa12.64□□□□□ -0.39
CBWD1-225ENST00000616944 SELLP14151 372 aa12.64□□□□□ -0.39
CBWD1-225ENST00000616944 RCVRNP35243 200 aa12.64□□□□□ -0.39
CBWD1-225ENST00000616944 CBX5P45973 191 aa12.64□□□□□ -0.39
CBWD1-225ENST00000616944 ATXN7L3Q14CW9 347 aaPredicted RBP12.64□□□□□ -0.39
CBWD1-225ENST00000616944 RSBN1Q5VWQ0 802 aaPredicted RBP12.64□□□□□ -0.39
CBWD1-225ENST00000616944 ASCC1Q8N9N2 400 aaKnown RBP12.64□□□□□ -0.39
CBWD1-225ENST00000616944 MRPL30Q8TCC3 161 aaKnown RBP12.64□□□□□ -0.39
CBWD1-225ENST00000616944 NEK7Q8TDX7 302 aa12.64□□□□□ -0.39
CBWD1-225ENST00000616944 COQ2Q96H96 371 aa12.64□□□□□ -0.39
CBWD1-225ENST00000616944 SNX22Q96L94 193 aa12.64□□□□□ -0.39
CBWD1-225ENST00000616944 CCL13Q99616 98 aa12.64□□□□□ -0.39
CBWD1-225ENST00000616944 ZNF230Q9UIE0 474 aaPredicted RBP12.64□□□□□ -0.39
CBWD1-225ENST00000616944 TK1P04183 234 aa12.63□□□□□ -0.39
CBWD1-225ENST00000616944 TMEM33P57088 247 aa12.63□□□□□ -0.39
CBWD1-225ENST00000616944 ASAH1Q13510 395 aa12.63□□□□□ -0.39
CBWD1-225ENST00000616944 ZNF880Q6PDB4 577 aa12.63□□□□□ -0.39
CBWD1-225ENST00000616944 HOGA1Q86XE5 327 aa12.63□□□□□ -0.39
CBWD1-225ENST00000616944 TOMM5Q8N4H5 51 aa12.63□□□□□ -0.39
CBWD1-225ENST00000616944 FAM216BQ8N7L0 139 aa12.63□□□□□ -0.39
CBWD1-225ENST00000616944 FAM234AQ9H0X4 552 aa12.63□□□□□ -0.39
CBWD1-225ENST00000616944 RIMS4Q9H426 269 aaPredicted RBP12.63□□□□□ -0.39
CBWD1-225ENST00000616944 TAS2R8Q9NYW2 309 aa12.63□□□□□ -0.39
CBWD1-225ENST00000616944 PDZD2O15018 2839 aa12.63□□□□□ -0.39
CBWD1-225ENST00000616944 MALRD1Q5VYJ5 2156 aa12.63□□□□□ -0.39
CBWD1-225ENST00000616944 IGKV1D-8A0A087WSZ0 117 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 POM121CA8CG34 1229 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 TMPRSS2O15393 492 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 NDUFA2O43678 99 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 CSF1P09603 554 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 IL13RA1P78552 427 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 DYRK1AQ13627 763 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 GRK1Q15835 563 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 KCNJ8Q15842 424 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 SRSF7Q16629 238 aaKnown RBP eCLIP12.62□□□□□ -0.39
CBWD1-225ENST00000616944 SLC35E4Q6ICL7 350 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 OR52W1Q6IF63 320 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 LYPD2Q6UXB3 125 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 Q6ZS49 121 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 PEG10Q86TG7 708 aaKnown RBP12.62□□□□□ -0.39
CBWD1-225ENST00000616944 ZNF525Q8N782 197 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 TMEM229BQ8NBD8 167 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 SETD6Q8TBK2 473 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 DEDD2Q8WXF8 326 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 MYOZ1Q9NP98 299 aaPredicted RBP12.62□□□□□ -0.39
CBWD1-225ENST00000616944 IFT46Q9NQC8 304 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 CTSZQ9UBR2 303 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 NKX6-3A6NJ46 265 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 MGST3O14880 152 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 ECDO95905 644 aaPredicted RBP12.62□□□□□ -0.39
CBWD1-225ENST00000616944 MT-ND4P03905 459 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 CD74P04233 296 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 FCER2P06734 321 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 GIFP27352 417 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 MRPS15P82914 257 aaKnown RBP12.62□□□□□ -0.39
CBWD1-225ENST00000616944 TMEM155Q4W5P6 130 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 ZNF57Q68EA5 555 aaPredicted RBP12.62□□□□□ -0.39
CBWD1-225ENST00000616944 MUC20Q8N307 709 aaPredicted RBP12.62□□□□□ -0.39
CBWD1-225ENST00000616944 BEST4Q8NFU0 473 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 MAFIPQ8WZ33 124 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 GSX2Q9BZM3 304 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 MBNL3Q9NUK0 354 aaKnown RBP12.62□□□□□ -0.39
CBWD1-225ENST00000616944 ABCA2Q9BZC7 2435 aa12.62□□□□□ -0.39
CBWD1-225ENST00000616944 CEACAM18A8MTB9 384 aa12.61□□□□□ -0.39
CBWD1-225ENST00000616944 H7C1Q1 480 aa12.61□□□□□ -0.39
CBWD1-225ENST00000616944 PPIHO43447 177 aaKnown RBP12.61□□□□□ -0.39
CBWD1-225ENST00000616944 CD3DP04234 171 aa12.61□□□□□ -0.39
CBWD1-225ENST00000616944 GSTT2BP0CG30 244 aa12.61□□□□□ -0.39
CBWD1-225ENST00000616944 BTCP35070 178 aa12.61□□□□□ -0.39
CBWD1-225ENST00000616944 TAS2R19P59542 299 aa12.61□□□□□ -0.39
CBWD1-225ENST00000616944 AP3S2P59780 193 aa12.61□□□□□ -0.39
CBWD1-225ENST00000616944 AESQ08117 197 aa12.61□□□□□ -0.39
CBWD1-225ENST00000616944 AVPI1Q5T686 147 aa12.61□□□□□ -0.39
CBWD1-225ENST00000616944 SLC36A1Q7Z2H8 476 aa12.61□□□□□ -0.39
CBWD1-225ENST00000616944 OR4D10Q8NGI6 311 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms