RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 SLC22A20A6NK97 555 aa16.59■□□□□ 0.25
SPAST-203ENST00000615843 LMO7DNF2Z398 122 aa16.59■□□□□ 0.25
SPAST-203ENST00000615843 DEDDO75618 318 aa16.59■□□□□ 0.25
SPAST-203ENST00000615843 CSN3P07498 182 aa16.59■□□□□ 0.25
SPAST-203ENST00000615843 PATE4P0C8F1 98 aa16.59■□□□□ 0.25
SPAST-203ENST00000615843 TMEM50BP56557 158 aa16.59■□□□□ 0.25
SPAST-203ENST00000615843 FZD5Q13467 585 aa16.59■□□□□ 0.25
SPAST-203ENST00000615843 SIPA1L3O60292 1781 aaPredicted RBP16.59■□□□□ 0.25
SPAST-203ENST00000615843 K7ERU9 68 aa16.59■□□□□ 0.25
SPAST-203ENST00000615843 CDX1P47902 265 aaPredicted RBP16.59■□□□□ 0.25
SPAST-203ENST00000615843 UBE2L3P68036 154 aaKnown RBP16.59■□□□□ 0.25
SPAST-203ENST00000615843 C16orf47Q6ZP98 133 aaPredicted RBP16.59■□□□□ 0.25
SPAST-203ENST00000615843 OR2M7Q8NG81 312 aa16.59■□□□□ 0.25
SPAST-203ENST00000615843 OR1L4Q8NGR5 311 aa16.59■□□□□ 0.25
SPAST-203ENST00000615843 FOXQ1Q9C009 403 aa16.59■□□□□ 0.25
SPAST-203ENST00000615843 PROCRQ9UNN8 238 aa16.59■□□□□ 0.25
SPAST-203ENST00000615843 TUBGCP6Q96RT7 1819 aa16.58■□□□□ 0.25
SPAST-203ENST00000615843 MEX3AA1L020 520 aaKnown RBP16.58■□□□□ 0.25
SPAST-203ENST00000615843 FCARP24071 287 aa16.58■□□□□ 0.25
SPAST-203ENST00000615843 BLNKQ8WV28 456 aa16.58■□□□□ 0.25
SPAST-203ENST00000615843 AAMDCQ9H7C9 122 aa16.58■□□□□ 0.25
SPAST-203ENST00000615843 AURKAIP1Q9NWT8 199 aaPredicted RBP16.58■□□□□ 0.25
SPAST-203ENST00000615843 SLC2A8Q9NY64 477 aa16.58■□□□□ 0.25
SPAST-203ENST00000615843 IGHV5-51A0A0C4DH38 117 aa16.58■□□□□ 0.24
SPAST-203ENST00000615843 A0A1W2PPV9 198 aa16.58■□□□□ 0.24
SPAST-203ENST00000615843 M0R1B8 84 aa16.58■□□□□ 0.24
SPAST-203ENST00000615843 VMA21Q3ZAQ7 101 aa16.58■□□□□ 0.24
SPAST-203ENST00000615843 HIST1H2BAQ96A08 127 aa16.58■□□□□ 0.24
SPAST-203ENST00000615843 IGHV3-43A0A0B4J1X8 118 aa16.58■□□□□ 0.24
SPAST-203ENST00000615843 IGHV3-43DP0DP04 118 aa16.58■□□□□ 0.24
SPAST-203ENST00000615843 LSM6P62312 80 aaKnown RBP16.58■□□□□ 0.24
SPAST-203ENST00000615843 PAFAH1B2P68402 229 aa16.58■□□□□ 0.24
SPAST-203ENST00000615843 GPR61Q9BZJ8 451 aa16.58■□□□□ 0.24
SPAST-203ENST00000615843 TECRQ9NZ01 308 aaKnown RBP16.58■□□□□ 0.24
SPAST-203ENST00000615843 WASHC3Q9Y3C0 194 aa16.58■□□□□ 0.24
SPAST-203ENST00000615843 A0A1B0GU03 582 aa16.58■□□□□ 0.24
SPAST-203ENST00000615843 RUNX1Q01196 453 aa16.58■□□□□ 0.24
SPAST-203ENST00000615843 TMEM211Q6ICI0 200 aa16.58■□□□□ 0.24
SPAST-203ENST00000615843 TRAT1Q6PIZ9 186 aa16.58■□□□□ 0.24
SPAST-203ENST00000615843 OR1L3Q8NH93 324 aa16.58■□□□□ 0.24
SPAST-203ENST00000615843 MAP1LC3CQ9BXW4 147 aa16.58■□□□□ 0.24
SPAST-203ENST00000615843 TRBV5-5A0A0J9YX44 114 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 A0A1W2PQD3 144 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 BGLAPP02818 100 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 KLK2P20151 261 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 OR1P1Q8NH06 330 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 FAM60AQ9NP50 221 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 DOK5Q9P104 306 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 SIAH2O43255 324 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 SUCLG1P53597 346 aaKnown RBP16.57■□□□□ 0.24
SPAST-203ENST00000615843 FNDC7Q5VTL7 733 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 SPNS3Q6ZMD2 512 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 LYG1Q8N1E2 194 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 OR2A4O95047 310 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 BCL3P20749 454 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 CTGFP29279 349 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 LAMTOR1Q6IAA8 161 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 OR10AD1Q8NGE0 317 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 OR2A7Q96R45 310 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 A0A1B0GV90 55 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 LRRC3CA6NJW4 275 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 LIPT2A6NK58 231 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 HSPB1P04792 205 aaKnown RBP16.57■□□□□ 0.24
SPAST-203ENST00000615843 SP1P08047 785 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 LBX1P52954 281 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 MRGPRFQ96AM1 343 aa16.57■□□□□ 0.24
SPAST-203ENST00000615843 ADAMTSL3P82987 1691 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 MYO7AQ13402 2215 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 OR5B21A6NL26 309 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 ACAA2P42765 397 aaKnown RBP16.56■□□□□ 0.24
SPAST-203ENST00000615843 PPP1CAP62136 330 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 PSG5Q15238 335 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 HLA-BQ31612 363 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 OR4P4Q8NGL7 312 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 OR13G1Q8NGZ3 307 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 NPDC1Q9NQX5 325 aaPredicted RBP16.56■□□□□ 0.24
SPAST-203ENST00000615843 GPR3P46089 330 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 COL19A1Q14993 1142 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 AQP10Q96PS8 301 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 HSD17B10Q99714 261 aaKnown RBP16.56■□□□□ 0.24
SPAST-203ENST00000615843 GPR132Q9UNW8 380 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 SCN9AQ15858 1988 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 A6NDN8 102 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 HRKO00198 91 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 FSTP19883 344 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 KIR2DS2P43631 304 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 TGIF2LXQ8IUE1 241 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 ZNF738Q8NE65 137 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 OR4F17Q8NGA8 305 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 SGMS2Q8NHU3 365 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 HDHD3Q9BSH5 251 aaPredicted RBP16.56■□□□□ 0.24
SPAST-203ENST00000615843 CES1P1Q9UKY3 287 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 CSRP3P50461 194 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 ANKRD37Q7Z713 158 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 MRGPRDQ8TDS7 321 aa16.56■□□□□ 0.24
SPAST-203ENST00000615843 CYR61O00622 381 aa16.55■□□□□ 0.24
SPAST-203ENST00000615843 HKR1P10072 659 aa16.55■□□□□ 0.24
SPAST-203ENST00000615843 MYF5P13349 255 aa16.55■□□□□ 0.24
SPAST-203ENST00000615843 TGIF2-C20orf24A0A0A6YYL0 155 aa16.55■□□□□ 0.24
SPAST-203ENST00000615843 CXorf65A6NEN9 183 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms