RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 FAM172BPA6NC97 362 aa18.25■□□□□ 0.51
FAM228B-208ENST00000613899 TOR1AO14656 332 aa18.25■□□□□ 0.51
FAM228B-208ENST00000613899 CLIC3O95833 236 aa18.25■□□□□ 0.51
FAM228B-208ENST00000613899 GDNFP39905 211 aa18.25■□□□□ 0.51
FAM228B-208ENST00000613899 GLP1RP43220 463 aa18.25■□□□□ 0.51
FAM228B-208ENST00000613899 HLA-DRB5Q30154 266 aa18.25■□□□□ 0.51
FAM228B-208ENST00000613899 PACRGLQ8N7B6 248 aa18.25■□□□□ 0.51
FAM228B-208ENST00000613899 NCOR1P1Q9H4R4 102 aa18.25■□□□□ 0.51
FAM228B-208ENST00000613899 TMEM138Q9NPI0 162 aa18.25■□□□□ 0.51
FAM228B-208ENST00000613899 KBTBD11-OT1A0A1B0GTJ5 212 aa18.24■□□□□ 0.51
FAM228B-208ENST00000613899 OPN1MWP04001 364 aa18.24■□□□□ 0.51
FAM228B-208ENST00000613899 OPN1MW2P0DN77 364 aa18.24■□□□□ 0.51
FAM228B-208ENST00000613899 OPN1MW3P0DN78 364 aa18.24■□□□□ 0.51
FAM228B-208ENST00000613899 VDAC2P45880 294 aaPredicted RBP18.24■□□□□ 0.51
FAM228B-208ENST00000613899 KCNJ3P48549 501 aa18.24■□□□□ 0.51
FAM228B-208ENST00000613899 PRRX1P54821 245 aa18.24■□□□□ 0.51
FAM228B-208ENST00000613899 LRRC36Q1X8D7 754 aa18.24■□□□□ 0.51
FAM228B-208ENST00000613899 C17orf58Q2M2W7 97 aa18.24■□□□□ 0.51
FAM228B-208ENST00000613899 ZNF565Q8N9K5 539 aa18.24■□□□□ 0.51
FAM228B-208ENST00000613899 Q8NFD4 153 aa18.24■□□□□ 0.51
FAM228B-208ENST00000613899 CAPSLQ8WWF8 208 aa18.24■□□□□ 0.51
FAM228B-208ENST00000613899 BARHL1Q9BZE3 327 aa18.24■□□□□ 0.51
FAM228B-208ENST00000613899 CHCHD3Q9NX63 227 aaKnown RBP18.24■□□□□ 0.51
FAM228B-208ENST00000613899 BABAM2Q9NXR7 383 aa18.24■□□□□ 0.51
FAM228B-208ENST00000613899 ZNF281Q9Y2X9 895 aa18.24■□□□□ 0.51
FAM228B-208ENST00000613899 MEIKINA0A087WXM9 373 aa18.23■□□□□ 0.51
FAM228B-208ENST00000613899 TRAV24A0A0B4J272 114 aa18.23■□□□□ 0.51
FAM228B-208ENST00000613899 PAX5Q02548 391 aa18.23■□□□□ 0.51
FAM228B-208ENST00000613899 DDI2Q5TDH0 399 aa18.23■□□□□ 0.51
FAM228B-208ENST00000613899 CCDC144NLQ6NUI1 221 aa18.23■□□□□ 0.51
FAM228B-208ENST00000613899 ASCL4Q6XD76 172 aa18.23■□□□□ 0.51
FAM228B-208ENST00000613899 OR10K1Q8NGX5 313 aa18.23■□□□□ 0.51
FAM228B-208ENST00000613899 OR52N1Q8NH53 320 aa18.23■□□□□ 0.51
FAM228B-208ENST00000613899 KIRREL1Q96J84 757 aa18.23■□□□□ 0.51
FAM228B-208ENST00000613899 WNT10AQ9GZT5 417 aa18.23■□□□□ 0.51
FAM228B-208ENST00000613899 LIN7BQ9HAP6 207 aa18.23■□□□□ 0.51
FAM228B-208ENST00000613899 IL36GQ9NZH8 169 aa18.23■□□□□ 0.51
FAM228B-208ENST00000613899 KIF25Q9UIL4 384 aa18.23■□□□□ 0.51
FAM228B-208ENST00000613899 OOSP1A8MZH6 123 aa18.22■□□□□ 0.51
FAM228B-208ENST00000613899 BUB1B-PAK6H3BSN5 160 aa18.22■□□□□ 0.51
FAM228B-208ENST00000613899 OGG1O15527 345 aa18.22■□□□□ 0.51
FAM228B-208ENST00000613899 HTR3BO95264 441 aa18.22■□□□□ 0.51
FAM228B-208ENST00000613899 C21orf33P30042 268 aaPredicted RBP18.22■□□□□ 0.51
FAM228B-208ENST00000613899 ZNF93P35789 620 aaPredicted RBP18.22■□□□□ 0.51
FAM228B-208ENST00000613899 OR3A4PP47883 348 aa18.22■□□□□ 0.51
FAM228B-208ENST00000613899 BLCAPP62952 87 aa18.22■□□□□ 0.51
FAM228B-208ENST00000613899 PIGYQ3MUY2 71 aa18.22■□□□□ 0.51
FAM228B-208ENST00000613899 TPTE2P1Q5T6R2 138 aa18.22■□□□□ 0.51
FAM228B-208ENST00000613899 HIST2H2BDQ6DRA6 164 aa18.22■□□□□ 0.51
FAM228B-208ENST00000613899 DHRSXQ8N5I4 330 aa18.22■□□□□ 0.51
FAM228B-208ENST00000613899 OR9G1Q8NH87 305 aa18.22■□□□□ 0.51
FAM228B-208ENST00000613899 WIPF2Q8TF74 440 aaPredicted RBP18.22■□□□□ 0.51
FAM228B-208ENST00000613899 TMEM80Q96HE8 168 aa18.22■□□□□ 0.51
FAM228B-208ENST00000613899 S100A13Q99584 98 aa18.22■□□□□ 0.51
FAM228B-208ENST00000613899 METTL9Q9H1A3 318 aa18.22■□□□□ 0.51
FAM228B-208ENST00000613899 PAK1IP1Q9NWT1 392 aaPredicted RBP18.22■□□□□ 0.51
FAM228B-208ENST00000613899 CALYQ9NYX4 217 aa18.22■□□□□ 0.51
FAM228B-208ENST00000613899 AMMECR1Q9Y4X0 333 aaPredicted RBP18.22■□□□□ 0.51
FAM228B-208ENST00000613899 CSTBP04080 98 aaKnown RBP18.21■□□□□ 0.51
FAM228B-208ENST00000613899 NFYBP25208 207 aa18.21■□□□□ 0.51
FAM228B-208ENST00000613899 BDKRB2P30411 391 aa18.21■□□□□ 0.51
FAM228B-208ENST00000613899 MNDAP41218 407 aa18.21■□□□□ 0.51
FAM228B-208ENST00000613899 RIPK1Q13546 671 aa18.21■□□□□ 0.51
FAM228B-208ENST00000613899 RBM39Q14498 530 aaKnown RBP18.21■□□□□ 0.51
FAM228B-208ENST00000613899 NHLRC3Q5JS37 347 aa18.21■□□□□ 0.51
FAM228B-208ENST00000613899 RSBN1Q5VWQ0 802 aaPredicted RBP18.21■□□□□ 0.51
FAM228B-208ENST00000613899 NDUFA11Q86Y39 141 aa18.21■□□□□ 0.51
FAM228B-208ENST00000613899 C1QL4Q86Z23 238 aa18.21■□□□□ 0.51
FAM228B-208ENST00000613899 OR13A1Q8NGR1 328 aa18.21■□□□□ 0.51
FAM228B-208ENST00000613899 OR5M11Q96RB7 305 aa18.21■□□□□ 0.51
FAM228B-208ENST00000613899 MMP28Q9H239 520 aa18.21■□□□□ 0.51
FAM228B-208ENST00000613899 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.21■□□□□ 0.51
FAM228B-208ENST00000613899 CKLFQ9UBR5 152 aa18.21■□□□□ 0.51
FAM228B-208ENST00000613899 SIRT4Q9Y6E7 314 aaPredicted RBP18.21■□□□□ 0.51
FAM228B-208ENST00000613899 HSPE1-MOB4S4R3N1 261 aa18.21■□□□□ 0.51
FAM228B-208ENST00000613899 CDRT1O95170 752 aa18.2■□□□□ 0.5
FAM228B-208ENST00000613899 IL1AP01583 271 aa18.2■□□□□ 0.5
FAM228B-208ENST00000613899 CGB3P0DN86 165 aa18.2■□□□□ 0.5
FAM228B-208ENST00000613899 CGB7P0DN87 165 aa18.2■□□□□ 0.5
FAM228B-208ENST00000613899 CD28P10747 220 aa18.2■□□□□ 0.5
FAM228B-208ENST00000613899 EMX1Q04741 257 aaPredicted RBP18.2■□□□□ 0.5
FAM228B-208ENST00000613899 RCN1Q15293 331 aa18.2■□□□□ 0.5
FAM228B-208ENST00000613899 NSUN5P1Q3KNT7 163 aa18.2■□□□□ 0.5
FAM228B-208ENST00000613899 YIF1BQ5BJH7 314 aa18.2■□□□□ 0.5
FAM228B-208ENST00000613899 LINC00596Q86U02 117 aa18.2■□□□□ 0.5
FAM228B-208ENST00000613899 OSR2Q8N2R0 312 aa18.2■□□□□ 0.5
FAM228B-208ENST00000613899 GHSRQ92847 366 aa18.2■□□□□ 0.5
FAM228B-208ENST00000613899 SLC25A33Q9BSK2 321 aa18.2■□□□□ 0.5
FAM228B-208ENST00000613899 IFT22Q9H7X7 185 aa18.2■□□□□ 0.5
FAM228B-208ENST00000613899 LINC00574Q9H8X3 128 aa18.2■□□□□ 0.5
FAM228B-208ENST00000613899 PCDHB16Q9NRJ7 776 aa18.2■□□□□ 0.5
FAM228B-208ENST00000613899 CLEC2DQ9UHP7 191 aa18.2■□□□□ 0.5
FAM228B-208ENST00000613899 ST3GAL6Q9Y274 331 aa18.2■□□□□ 0.5
FAM228B-208ENST00000613899 PLXNB1O43157 2135 aa18.19■□□□□ 0.5
FAM228B-208ENST00000613899 TRBV5-5A0A0J9YX44 114 aa18.19■□□□□ 0.5
FAM228B-208ENST00000613899 ZNF780AO75290 641 aaPredicted RBP18.19■□□□□ 0.5
FAM228B-208ENST00000613899 OR2F2O95006 317 aa18.19■□□□□ 0.5
FAM228B-208ENST00000613899 LALBAP00709 142 aa18.19■□□□□ 0.5
FAM228B-208ENST00000613899 CD24P25063 80 aa18.19■□□□□ 0.5
FAM228B-208ENST00000613899 RBM11P57052 281 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms