RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 ZG16BQ96DA0 208 aa15.34■□□□□ 0.05
HMGXB3-206ENST00000613459 MS4A7Q9GZW8 240 aaPredicted RBP15.34■□□□□ 0.05
HMGXB3-206ENST00000613459 WDR13Q9H1Z4 485 aa15.34■□□□□ 0.05
HMGXB3-206ENST00000613459 USP54Q70EL1 1684 aa15.34■□□□□ 0.05
HMGXB3-206ENST00000613459 C7orf77A4D0Y5 90 aa15.34■□□□□ 0.05
HMGXB3-206ENST00000613459 C5orf52A6NGY3 159 aa15.34■□□□□ 0.05
HMGXB3-206ENST00000613459 F5H697 171 aa15.34■□□□□ 0.05
HMGXB3-206ENST00000613459 CD3EP07766 207 aa15.34■□□□□ 0.05
HMGXB3-206ENST00000613459 PGA4P0DJD7 388 aa15.34■□□□□ 0.05
HMGXB3-206ENST00000613459 PGA5P0DJD9 388 aa15.34■□□□□ 0.05
HMGXB3-206ENST00000613459 LSM11P83369 360 aaKnown RBP eCLIP15.34■□□□□ 0.05
HMGXB3-206ENST00000613459 KLF9Q13886 244 aaPredicted RBP15.34■□□□□ 0.05
HMGXB3-206ENST00000613459 GVQW1Q8N7I0 195 aa15.34■□□□□ 0.05
HMGXB3-206ENST00000613459 OR11H7Q8NGC8 314 aa15.34■□□□□ 0.05
HMGXB3-206ENST00000613459 LILRB1Q8NHL6 650 aaPredicted RBP15.34■□□□□ 0.05
HMGXB3-206ENST00000613459 LHX9Q9NQ69 397 aa15.34■□□□□ 0.05
HMGXB3-206ENST00000613459 BCORQ6W2J9 1755 aa15.34■□□□□ 0.05
HMGXB3-206ENST00000613459 ABCA3Q99758 1704 aa15.34■□□□□ 0.05
HMGXB3-206ENST00000613459 POLR2GP62487 172 aaKnown RBP eCLIP15.33■□□□□ 0.05
HMGXB3-206ENST00000613459 RFESDQ8TAC1 157 aa15.33■□□□□ 0.05
HMGXB3-206ENST00000613459 DTD1Q8TEA8 209 aa15.33■□□□□ 0.05
HMGXB3-206ENST00000613459 ALX4Q9H161 411 aaPredicted RBP15.33■□□□□ 0.05
HMGXB3-206ENST00000613459 FRRS1LQ9P0K9 344 aa15.33■□□□□ 0.05
HMGXB3-206ENST00000613459 PCOLCE2Q9UKZ9 415 aa15.33■□□□□ 0.05
HMGXB3-206ENST00000613459 HAND1O96004 215 aa15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 LGALS7P47929 136 aa15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 CAMPP49913 170 aa15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 TMEM65Q6PI78 240 aa15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 CBLN2Q8IUK8 224 aa15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 PLA2G2FQ9BZM2 168 aa15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 OR4C45A6NMZ5 311 aa15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 TGIF2LXQ8IUE1 241 aa15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 OR8B3Q8NGG8 313 aa15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 OR5A2Q8NGI9 324 aa15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 RNF133Q8WVZ7 376 aa15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 OR8B2Q96RD0 313 aa15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 OPN4Q9UHM6 478 aa15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 SEC11BP0C7V7 166 aa15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 RPL24P83731 157 aaKnown RBP15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 C9orf50Q5SZB4 431 aa15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 FAM109BQ6ICB4 259 aaPredicted RBP15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 SLC25A40Q8TBP6 338 aa15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 ECM29Q5VYK3 1845 aa15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 TCRBV16S1A1N1A0A5B0 115 aa15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 MED19A0JLT2 244 aaPredicted RBP15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 GCSHP23434 173 aa15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 RPL30P62888 115 aaKnown RBP15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 CBLN3Q6UW01 205 aa15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 MIXL1Q9H2W2 232 aa15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 FLRT3Q9NZU0 649 aa15.33■□□□□ 0.04
HMGXB3-206ENST00000613459 ADAP1O75689 374 aa15.32■□□□□ 0.04
HMGXB3-206ENST00000613459 PPYP01298 95 aa15.32■□□□□ 0.04
HMGXB3-206ENST00000613459 PRSS1P07477 247 aa15.32■□□□□ 0.04
HMGXB3-206ENST00000613459 CD99P14209 185 aa15.32■□□□□ 0.04
HMGXB3-206ENST00000613459 LGALSLQ3ZCW2 172 aaPredicted RBP15.32■□□□□ 0.04
HMGXB3-206ENST00000613459 RASL10BQ96S79 203 aa15.32■□□□□ 0.04
HMGXB3-206ENST00000613459 TMEM204Q9BSN7 226 aa15.32■□□□□ 0.04
HMGXB3-206ENST00000613459 LYZP61626 148 aa15.32■□□□□ 0.04
HMGXB3-206ENST00000613459 GGTLC2Q14390 218 aa15.32■□□□□ 0.04
HMGXB3-206ENST00000613459 NTMQ9P121 344 aa15.32■□□□□ 0.04
HMGXB3-206ENST00000613459 ARID1BQ8NFD5 2236 aaPredicted RBP15.32■□□□□ 0.04
HMGXB3-206ENST00000613459 DNASE2O00115 360 aaPredicted RBP15.32■□□□□ 0.04
HMGXB3-206ENST00000613459 HIST3H3Q16695 136 aa15.32■□□□□ 0.04
HMGXB3-206ENST00000613459 KHDC3LQ587J8 217 aa15.32■□□□□ 0.04
HMGXB3-206ENST00000613459 OR5R1Q8NH85 324 aa15.32■□□□□ 0.04
HMGXB3-206ENST00000613459 EID2BQ96D98 161 aa15.32■□□□□ 0.04
HMGXB3-206ENST00000613459 POM121Q96HA1 1249 aa15.32■□□□□ 0.04
HMGXB3-206ENST00000613459 SNX22Q96L94 193 aa15.32■□□□□ 0.04
HMGXB3-206ENST00000613459 BGLAPP02818 100 aa15.32■□□□□ 0.04
HMGXB3-206ENST00000613459 PSG6Q00889 435 aa15.32■□□□□ 0.04
HMGXB3-206ENST00000613459 WDR54Q9H977 334 aa15.32■□□□□ 0.04
HMGXB3-206ENST00000613459 NUP205Q92621 2012 aa15.32■□□□□ 0.04
HMGXB3-206ENST00000613459 P01737 135 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 MYF5P13349 255 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 MMP9P14780 707 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 PMELP40967 661 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 OR2H1Q9GZK4 316 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 RNF7Q9UBF6 113 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 A0A1B0GTH9 108 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 MMP16P51512 607 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 GABRA6Q16445 453 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 INO80CQ6PI98 192 aaPredicted RBP15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 ZNF665Q9H7R5 613 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 MSL2Q9HCI7 577 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 AP5S1Q9NUS5 200 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 PIPOXQ9P0Z9 390 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 MIOXQ9UGB7 285 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 ACAA1P09110 424 aaPredicted RBP15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 TNXAQ16473 311 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 CA5BP1Q8WTZ4 195 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 CT55Q8WUE5 264 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 CCL17Q92583 94 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 HEXA-AS1Q9H8Q6 139 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 OR2W1Q9Y3N9 320 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 H3BQ15 152 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 COL9A1P20849 921 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 TMEM251Q8N6I4 163 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 CHST5Q9GZS9 411 aa15.31■□□□□ 0.04
HMGXB3-206ENST00000613459 ZNF25P17030 456 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms