RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 RYDENQ9NUL5 291 aaKnown RBP6.31□□□□□ -1.4
CSDE1-218ENST00000610726 CACNG5Q9UF02 275 aa6.31□□□□□ -1.4
CSDE1-218ENST00000610726 PURGQ9UJV8 347 aaKnown RBP6.31□□□□□ -1.4
CSDE1-218ENST00000610726 LAMP3Q9UQV4 416 aa6.31□□□□□ -1.4
CSDE1-218ENST00000610726 ABCA1O95477 2261 aa6.31□□□□□ -1.4
CSDE1-218ENST00000610726 HEATR5AQ86XA9 2040 aa6.31□□□□□ -1.4
CSDE1-218ENST00000610726 TRDCB7Z8K6 153 aa6.31□□□□□ -1.4
CSDE1-218ENST00000610726 EFNA2O43921 213 aa6.31□□□□□ -1.4
CSDE1-218ENST00000610726 OPN1MWP04001 364 aa6.31□□□□□ -1.4
CSDE1-218ENST00000610726 OPN1MW2P0DN77 364 aa6.31□□□□□ -1.4
CSDE1-218ENST00000610726 OPN1MW3P0DN78 364 aa6.31□□□□□ -1.4
CSDE1-218ENST00000610726 MDH2P40926 338 aaKnown RBP6.31□□□□□ -1.4
CSDE1-218ENST00000610726 RBM11P57052 281 aaKnown RBP6.31□□□□□ -1.4
CSDE1-218ENST00000610726 TMPRSS3P57727 454 aa6.31□□□□□ -1.4
CSDE1-218ENST00000610726 ENDOGQ14249 297 aaKnown RBP6.31□□□□□ -1.4
CSDE1-218ENST00000610726 SPINK9Q5DT21 86 aa6.31□□□□□ -1.4
CSDE1-218ENST00000610726 TMEM255AQ5JRV8 349 aa6.31□□□□□ -1.4
CSDE1-218ENST00000610726 C1orf100Q5SVJ3 147 aa6.31□□□□□ -1.4
CSDE1-218ENST00000610726 STUMQ69YW2 141 aa6.31□□□□□ -1.4
CSDE1-218ENST00000610726 VWA1Q6PCB0 445 aa6.31□□□□□ -1.4
CSDE1-218ENST00000610726 RBMS3Q6XE24 437 aaKnown RBP6.31□□□□□ -1.4
CSDE1-218ENST00000610726 GAPTQ8N292 157 aa6.31□□□□□ -1.4
CSDE1-218ENST00000610726 ADAD2Q8NCV1 583 aaKnown RBP6.31□□□□□ -1.4
CSDE1-218ENST00000610726 ABHD17AQ96GS6 310 aa6.31□□□□□ -1.4
CSDE1-218ENST00000610726 SLC2A9Q9NRM0 540 aa6.31□□□□□ -1.4
CSDE1-218ENST00000610726 RASL12Q9NYN1 266 aa6.31□□□□□ -1.4
CSDE1-218ENST00000610726 ONECUT1Q9UBC0 465 aa6.31□□□□□ -1.4
CSDE1-218ENST00000610726 LIPGQ9Y5X9 500 aa6.31□□□□□ -1.4
CSDE1-218ENST00000610726 SCN8AQ9UQD0 1980 aa6.31□□□□□ -1.4
CSDE1-218ENST00000610726 FRMPD3Q5JV73 1810 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 hADV38S2A0JD32 116 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 ZNF724A8MTY0 619 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 PMELP40967 661 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 FAM3AP98173 230 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 HAGHQ16775 308 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 TEX261Q6UWH6 196 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 UBAC2Q8NBM4 344 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 OR11H7Q8NGC8 314 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 OR5M8Q8NGP6 311 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 TAAR6Q96RI8 345 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 ZNF552Q9H707 407 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-218ENST00000610726 RNF7Q9UBF6 113 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 U3KQ87 197 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 TRAV38-1A0A0B4J264 116 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 PINLYPA6NC86 204 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 ATP6V1G2-DDX39BF2Z307 99 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 NEURL1O76050 574 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 CTSDP07339 412 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-218ENST00000610726 KCNJ3P48549 501 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 ZBTB37Q5TC79 503 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 CLEC9AQ6UXN8 241 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 TBC1D26Q86UD7 250 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 TMEM123Q8N131 208 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 OR5D13Q8NGL4 314 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 PTX4Q96A99 478 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 C20orf24Q9BUV8 137 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 SAV1Q9H4B6 383 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-218ENST00000610726 OR6C3Q9NZP0 311 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 FAM24AA6NFZ4 105 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 C19orf67A6NJJ6 358 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 C1orf196B1AJZ1 125 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 PRR32B1ATL7 298 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 HMGB3O15347 200 aaKnown RBP6.3□□□□□ -1.4
CSDE1-218ENST00000610726 BCL2L11O43521 198 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 SUB1P53999 127 aaKnown RBP eCLIP6.3□□□□□ -1.47e-7■■■■□ 21.6
CSDE1-218ENST00000610726 P2RX3P56373 397 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 POLR2GP62487 172 aaKnown RBP eCLIP6.3□□□□□ -1.4
CSDE1-218ENST00000610726 PHYHD1Q5SRE7 291 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 H3F3CQ6NXT2 135 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 FDX2Q6P4F2 183 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 LHX4Q969G2 390 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 GNPNAT1Q96EK6 184 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-218ENST00000610726 MS4A5Q9H3V2 200 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 KIAA1456Q9P272 454 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 GNG13Q9P2W3 67 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 DNAH12Q6ZR08 3092 aa6.3□□□□□ -1.4
CSDE1-218ENST00000610726 ARPC4-TTLL3A0A0A6YYG9 625 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 MED19A0JLT2 244 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-218ENST00000610726 OR5H1A6NKK0 313 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 ALX3O95076 343 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 RRASP10301 218 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 CTSSP25774 331 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 ERHP84090 104 aaKnown RBP6.29□□□□□ -1.4
CSDE1-218ENST00000610726 ZNF260Q3ZCT1 412 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 HOGA1Q86XE5 327 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 TMEM54Q969K7 222 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 SCMH1Q96GD3 660 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 SLC35E1Q96K37 410 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 CIB3Q96Q77 187 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-218ENST00000610726 OR2V2Q96R30 315 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 PIGMQ9H3S5 423 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 KIAA2026Q5HYC2 2103 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 ANKRD34BA5PLL1 514 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 CDX4O14627 284 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-218ENST00000610726 RPS2P15880 293 aaKnown RBP6.29□□□□□ -1.4
CSDE1-218ENST00000610726 ZNF708P17019 499 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 CSRP1P21291 193 aaKnown RBP6.29□□□□□ -1.4
CSDE1-218ENST00000610726 NPBWR2P48146 333 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 IGSF11Q5DX21 431 aa6.29□□□□□ -1.4
CSDE1-218ENST00000610726 BMPERQ8N8U9 685 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms