RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 WSB1Q9Y6I7 421 aa17.6■□□□□ 0.41
SSBP3-216ENST00000610401 CXorf65A6NEN9 183 aa17.59■□□□□ 0.41
SSBP3-216ENST00000610401 CNN3Q15417 329 aaKnown RBP17.59■□□□□ 0.41
SSBP3-216ENST00000610401 HMGN3Q15651 99 aa17.59■□□□□ 0.41
SSBP3-216ENST00000610401 RAB30Q15771 203 aa17.59■□□□□ 0.41
SSBP3-216ENST00000610401 TGIF2Q9GZN2 237 aa17.59■□□□□ 0.41
SSBP3-216ENST00000610401 EGLN1Q9GZT9 426 aa17.59■□□□□ 0.41
SSBP3-216ENST00000610401 HSF4Q9ULV5 492 aa17.59■□□□□ 0.41
SSBP3-216ENST00000610401 IFITM10A6NMD0 228 aa17.59■□□□□ 0.41
SSBP3-216ENST00000610401 C10orf142B7Z368 130 aa17.59■□□□□ 0.41
SSBP3-216ENST00000610401 K7N7A8 449 aa17.59■□□□□ 0.41
SSBP3-216ENST00000610401 IGHV2-5P01817 119 aa17.59■□□□□ 0.41
SSBP3-216ENST00000610401 FABP4P15090 132 aa17.59■□□□□ 0.41
SSBP3-216ENST00000610401 BMP5P22003 454 aa17.59■□□□□ 0.41
SSBP3-216ENST00000610401 ELLP55199 621 aaPredicted RBP17.59■□□□□ 0.41
SSBP3-216ENST00000610401 CARD18P57730 90 aa17.59■□□□□ 0.41
SSBP3-216ENST00000610401 VSIRQ9H7M9 311 aa17.59■□□□□ 0.41
SSBP3-216ENST00000610401 CFIP05156 583 aa17.59■□□□□ 0.41
SSBP3-216ENST00000610401 DPPA2Q7Z7J5 298 aa17.59■□□□□ 0.41
SSBP3-216ENST00000610401 SUCNR1Q9BXA5 334 aa17.59■□□□□ 0.41
SSBP3-216ENST00000610401 CHRNA10Q9GZZ6 450 aa17.59■□□□□ 0.41
SSBP3-216ENST00000610401 OTX2P32243 289 aa17.58■□□□□ 0.4
SSBP3-216ENST00000610401 FOXG1P55316 489 aaPredicted RBP17.58■□□□□ 0.4
SSBP3-216ENST00000610401 SGCZQ96LD1 299 aa17.58■□□□□ 0.4
SSBP3-216ENST00000610401 PDCD6O75340 191 aa17.58■□□□□ 0.4
SSBP3-216ENST00000610401 H3F3AP84243 136 aa17.58■□□□□ 0.4
SSBP3-216ENST00000610401 RNF212Q495C1 297 aa17.58■□□□□ 0.4
SSBP3-216ENST00000610401 GPR157Q5UAW9 335 aa17.58■□□□□ 0.4
SSBP3-216ENST00000610401 WDR74Q6RFH5 385 aaPredicted RBP17.58■□□□□ 0.4
SSBP3-216ENST00000610401 LYPD6BQ8NI32 183 aa17.58■□□□□ 0.4
SSBP3-216ENST00000610401 POMT1Q9Y6A1 747 aa17.58■□□□□ 0.4
SSBP3-216ENST00000610401 SUCLG1P53597 346 aaKnown RBP17.57■□□□□ 0.4
SSBP3-216ENST00000610401 ARL6IP1Q15041 203 aa17.57■□□□□ 0.4
SSBP3-216ENST00000610401 OR56B2PQ8NGI1 322 aa17.57■□□□□ 0.4
SSBP3-216ENST00000610401 KLK3P07288 261 aaPredicted RBP17.57■□□□□ 0.4
SSBP3-216ENST00000610401 SLC25A53Q5H9E4 307 aa17.57■□□□□ 0.4
SSBP3-216ENST00000610401 SPSB3Q6PJ21 355 aa17.57■□□□□ 0.4
SSBP3-216ENST00000610401 HEPN1Q6WQI6 88 aa17.57■□□□□ 0.4
SSBP3-216ENST00000610401 ZNF665Q9H7R5 613 aa17.57■□□□□ 0.4
SSBP3-216ENST00000610401 SEBOXQ9HB31 216 aaPredicted RBP17.57■□□□□ 0.4
SSBP3-216ENST00000610401 C19orf25Q9UFG5 118 aaPredicted RBP17.57■□□□□ 0.4
SSBP3-216ENST00000610401 A0A0G2JRQ6 117 aa17.56■□□□□ 0.4
SSBP3-216ENST00000610401 SYNGR3O43761 229 aa17.56■□□□□ 0.4
SSBP3-216ENST00000610401 KCNMB1Q16558 191 aa17.56■□□□□ 0.4
SSBP3-216ENST00000610401 MOB3AQ96BX8 217 aa17.56■□□□□ 0.4
SSBP3-216ENST00000610401 FOXB1Q99853 325 aa17.56■□□□□ 0.4
SSBP3-216ENST00000610401 SSX3Q99909 188 aa17.56■□□□□ 0.4
SSBP3-216ENST00000610401 GTF3C1Q12789 2109 aa17.56■□□□□ 0.4
SSBP3-216ENST00000610401 ARGFXA6NJG6 315 aa17.56■□□□□ 0.4
SSBP3-216ENST00000610401 TK1P04183 234 aa17.56■□□□□ 0.4
SSBP3-216ENST00000610401 METTL15P1P0C7V9 234 aa17.56■□□□□ 0.4
SSBP3-216ENST00000610401 LIFP15018 202 aa17.56■□□□□ 0.4
SSBP3-216ENST00000610401 HOXA4Q00056 320 aaPredicted RBP17.56■□□□□ 0.4
SSBP3-216ENST00000610401 IL13RA2Q14627 380 aa17.56■□□□□ 0.4
SSBP3-216ENST00000610401 WDR25Q64LD2 544 aaPredicted RBP17.56■□□□□ 0.4
SSBP3-216ENST00000610401 CCDC71LQ8N9Z2 235 aa17.56■□□□□ 0.4
SSBP3-216ENST00000610401 SPSB1Q96BD6 273 aa17.56■□□□□ 0.4
SSBP3-216ENST00000610401 NIPSNAP3BQ9BS92 247 aa17.56■□□□□ 0.4
SSBP3-216ENST00000610401 RRP8O43159 456 aaKnown RBP17.56■□□□□ 0.4
SSBP3-216ENST00000610401 SRFP11831 508 aa17.56■□□□□ 0.4
SSBP3-216ENST00000610401 FUT3P21217 361 aa17.56■□□□□ 0.4
SSBP3-216ENST00000610401 ALDH3B1P43353 468 aa17.56■□□□□ 0.4
SSBP3-216ENST00000610401 RHEBQ15382 184 aa17.56■□□□□ 0.4
SSBP3-216ENST00000610401 SPATA46Q5T0L3 261 aa17.56■□□□□ 0.4
SSBP3-216ENST00000610401 RPS19BP1Q86WX3 136 aaKnown RBP17.56■□□□□ 0.4
SSBP3-216ENST00000610401 IL22RA1Q8N6P7 574 aa17.56■□□□□ 0.4
SSBP3-216ENST00000610401 GALNT14Q96FL9 552 aa17.56■□□□□ 0.4
SSBP3-216ENST00000610401 IGLV3-12A0A075B6K2 115 aa17.55■□□□□ 0.4
SSBP3-216ENST00000610401 C5orf49A4QMS7 147 aa17.55■□□□□ 0.4
SSBP3-216ENST00000610401 PPIHO43447 177 aaKnown RBP17.55■□□□□ 0.4
SSBP3-216ENST00000610401 IGLV3-1P01715 115 aa17.55■□□□□ 0.4
SSBP3-216ENST00000610401 FAM27BQ5VT28 67 aa17.55■□□□□ 0.4
SSBP3-216ENST00000610401 OR2T2Q6IF00 324 aa17.55■□□□□ 0.4
SSBP3-216ENST00000610401 BEND4Q6ZU67 534 aa17.55■□□□□ 0.4
SSBP3-216ENST00000610401 OR4D5Q8NGN0 318 aa17.55■□□□□ 0.4
SSBP3-216ENST00000610401 SNX22Q96L94 193 aa17.55■□□□□ 0.4
SSBP3-216ENST00000610401 PISDQ9UG56 409 aa17.55■□□□□ 0.4
SSBP3-216ENST00000610401 PPP1R3CQ9UQK1 317 aa17.55■□□□□ 0.4
SSBP3-216ENST00000610401 CHD3Q12873 2000 aaKnown RBP17.55■□□□□ 0.4
SSBP3-216ENST00000610401 TRDCB7Z8K6 153 aa17.55■□□□□ 0.4
SSBP3-216ENST00000610401 HSPA12AO43301 675 aa17.55■□□□□ 0.4
SSBP3-216ENST00000610401 IGHV2-70P01814 119 aa17.55■□□□□ 0.4
SSBP3-216ENST00000610401 SOD3P08294 240 aa17.55■□□□□ 0.4
SSBP3-216ENST00000610401 RBM11P57052 281 aaKnown RBP17.55■□□□□ 0.4
SSBP3-216ENST00000610401 ZNF266Q14584 549 aa17.55■□□□□ 0.4
SSBP3-216ENST00000610401 PCOLCEQ15113 449 aa17.55■□□□□ 0.4
SSBP3-216ENST00000610401 UNQ6494/PRO21346Q6UXR6 183 aa17.55■□□□□ 0.4
SSBP3-216ENST00000610401 FADS6Q8N9I5 356 aa17.55■□□□□ 0.4
SSBP3-216ENST00000610401 CPEB3Q8NE35 698 aaKnown RBP17.55■□□□□ 0.4
SSBP3-216ENST00000610401 TMEM54Q969K7 222 aa17.55■□□□□ 0.4
SSBP3-216ENST00000610401 MUCL1Q96DR8 90 aa17.55■□□□□ 0.4
SSBP3-216ENST00000610401 CEP250Q9BV73 2442 aa17.55■□□□□ 0.4
SSBP3-216ENST00000610401 DEFA4P12838 97 aa17.54■□□□□ 0.4
SSBP3-216ENST00000610401 ECI1P42126 302 aa17.54■□□□□ 0.4
SSBP3-216ENST00000610401 SSR4P51571 173 aa17.54■□□□□ 0.4
SSBP3-216ENST00000610401 ELOBQ15370 118 aa17.54■□□□□ 0.4
SSBP3-216ENST00000610401 TMEM222Q9H0R3 208 aa17.54■□□□□ 0.4
SSBP3-216ENST00000610401 CALHM2Q9HA72 323 aa17.54■□□□□ 0.4
SSBP3-216ENST00000610401 PROK2Q9HC23 129 aa17.54■□□□□ 0.4
SSBP3-216ENST00000610401 GAR1Q9NY12 217 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms