RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 UCP2P55851 309 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 UBA52P62987 128 aaKnown RBP13.53□□□□□ -0.24
CTSA-214ENST00000606788 ZNF154Q13106 437 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 SNTB1Q13884 538 aaKnown RBP13.53□□□□□ -0.24
CTSA-214ENST00000606788 ZNF818PQ6ZRF7 136 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 GLYATL2Q8WU03 294 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 SLC5A7Q9GZV3 580 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 OR1A1Q9P1Q5 309 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 A0A1B0GV50 99 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 COX5BP10606 129 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 CD82P27701 267 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 ID4P47928 161 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 PAN3Q58A45 887 aaKnown RBP13.53□□□□□ -0.24
CTSA-214ENST00000606788 DHRS11Q6UWP2 260 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 ZADH2Q8N4Q0 377 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 ZNF565Q8N9K5 539 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 KLF14Q8TD94 323 aaPredicted RBP13.53□□□□□ -0.24
CTSA-214ENST00000606788 GTF3AQ92664 365 aaKnown RBP13.53□□□□□ -0.24
CTSA-214ENST00000606788 ZNF71Q9NQZ8 489 aaPredicted RBP13.53□□□□□ -0.24
CTSA-214ENST00000606788 PCDHB16Q9NRJ7 776 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 IL36GQ9NZH8 169 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 RBM7Q9Y580 266 aaKnown RBP13.53□□□□□ -0.24
CTSA-214ENST00000606788 SS18L1O75177 396 aaPredicted RBP13.53□□□□□ -0.24
CTSA-214ENST00000606788 SLC34A2O95436 690 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 TK1P04183 234 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 EPHA1P21709 976 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 OMGP23515 440 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 GNRHRP30968 328 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 ZNF573Q86YE8 665 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 OR1S2Q8NGQ3 325 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 KIF25Q9UIL4 384 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 UBE2J1Q9Y385 318 aaPredicted RBP13.53□□□□□ -0.24
CTSA-214ENST00000606788 APOC3P02656 99 aa13.52□□□□□ -0.24
CTSA-214ENST00000606788 ZNF83P51522 516 aa13.52□□□□□ -0.24
CTSA-214ENST00000606788 CYCSP99999 105 aaKnown RBP13.52□□□□□ -0.24
CTSA-214ENST00000606788 PPA1Q15181 289 aa13.52□□□□□ -0.24
CTSA-214ENST00000606788 Q6ZT83 130 aa13.52□□□□□ -0.24
CTSA-214ENST00000606788 SLC35G3Q8N808 338 aa13.52□□□□□ -0.24
CTSA-214ENST00000606788 SARAFQ96BY9 339 aa13.52□□□□□ -0.24
CTSA-214ENST00000606788 PIK3IP1Q96FE7 263 aa13.52□□□□□ -0.24
CTSA-214ENST00000606788 Q9N2K0 584 aa13.52□□□□□ -0.24
CTSA-214ENST00000606788 ATPIF1Q9UII2 106 aa13.52□□□□□ -0.24
CTSA-214ENST00000606788 ABCA4P78363 2273 aa13.52□□□□□ -0.25
CTSA-214ENST00000606788 RRP8O43159 456 aaKnown RBP13.52□□□□□ -0.25
CTSA-214ENST00000606788 SRSF4Q08170 494 aaKnown RBP13.52□□□□□ -0.25
CTSA-214ENST00000606788 TMEM187Q14656 261 aa13.52□□□□□ -0.25
CTSA-214ENST00000606788 OR8G1Q15617 311 aa13.52□□□□□ -0.25
CTSA-214ENST00000606788 ACSF3Q4G176 576 aaPredicted RBP13.52□□□□□ -0.25
CTSA-214ENST00000606788 PRSS54Q6PEW0 395 aa13.52□□□□□ -0.25
CTSA-214ENST00000606788 TBC1D26Q86UD7 250 aa13.52□□□□□ -0.25
CTSA-214ENST00000606788 ZNF175Q9Y473 711 aa13.52□□□□□ -0.25
CTSA-214ENST00000606788 MFSD2BA6NFX1 497 aa13.51□□□□□ -0.25
CTSA-214ENST00000606788 PROB1E7EW31 1015 aa13.51□□□□□ -0.25
CTSA-214ENST00000606788 HSPA12AO43301 675 aa13.51□□□□□ -0.25
CTSA-214ENST00000606788 LTC4SQ16873 150 aa13.51□□□□□ -0.25
CTSA-214ENST00000606788 TMEM211Q6ICI0 200 aa13.51□□□□□ -0.25
CTSA-214ENST00000606788 PLPPR1Q8TBJ4 325 aa13.51□□□□□ -0.25
CTSA-214ENST00000606788 OR51I2Q9H344 312 aa13.51□□□□□ -0.25
CTSA-214ENST00000606788 TREM2Q9NZC2 230 aa13.51□□□□□ -0.25
CTSA-214ENST00000606788 TIMM8AO60220 97 aaPredicted RBP13.51□□□□□ -0.25
CTSA-214ENST00000606788 IGHG3P01860 377 aa13.51□□□□□ -0.25
CTSA-214ENST00000606788 MBPP02686 304 aaPredicted RBP13.51□□□□□ -0.25
CTSA-214ENST00000606788 CECR9P0C854 216 aa13.51□□□□□ -0.25
CTSA-214ENST00000606788 MRPL49Q13405 166 aaKnown RBP13.51□□□□□ -0.25
CTSA-214ENST00000606788 ERGIC1Q969X5 290 aa13.51□□□□□ -0.25
CTSA-214ENST00000606788 MOB3AQ96BX8 217 aa13.51□□□□□ -0.25
CTSA-214ENST00000606788 TECTBQ96PL2 329 aa13.51□□□□□ -0.25
CTSA-214ENST00000606788 GP6Q9HCN6 339 aa13.51□□□□□ -0.25
CTSA-214ENST00000606788 RASL12Q9NYN1 266 aa13.51□□□□□ -0.25
CTSA-214ENST00000606788 DKK4Q9UBT3 224 aa13.51□□□□□ -0.25
CTSA-214ENST00000606788 ERRFI1Q9UJM3 462 aaPredicted RBP13.51□□□□□ -0.25
CTSA-214ENST00000606788 RFNGQ9Y644 331 aa13.51□□□□□ -0.25
CTSA-214ENST00000606788 DOCK11Q5JSL3 2073 aa13.51□□□□□ -0.25
CTSA-214ENST00000606788 ZNF891A8MT65 544 aaPredicted RBP13.5□□□□□ -0.25
CTSA-214ENST00000606788 B8ZZF3 427 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 CA11O75493 328 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 IGHV3-13P01766 116 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 IGHV3-7P01780 117 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 ZNF169Q14929 603 aaPredicted RBP13.5□□□□□ -0.25
CTSA-214ENST00000606788 LDLRAD3Q86YD5 345 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 RNF150Q9ULK6 438 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 PCDHB10Q9UN67 800 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 NKX2-6A6NCS4 301 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 K7EPK0 472 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 OR2H2O95918 312 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 FOXC1Q12948 553 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 BTN1A1Q13410 526 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 ZNF345Q14585 488 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 SURF2Q15527 256 aaPredicted RBP13.5□□□□□ -0.25
CTSA-214ENST00000606788 FBXW12Q6X9E4 464 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 SEM1Q6ZVN7 128 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 DPPA2Q7Z7J5 298 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 LRP11Q86VZ4 500 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 FAM71E2Q8N5Q1 922 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 WDR31Q8NA23 367 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 RBMXL1Q96E39 390 aaKnown RBP13.5□□□□□ -0.25
CTSA-214ENST00000606788 HRH4Q9H3N8 390 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 CYTL1Q9NRR1 136 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 TRAPPC2LQ9UL33 140 aa13.5□□□□□ -0.25
CTSA-214ENST00000606788 LHX6Q9UPM6 363 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms